RNA–Protein interactions for RNA: ENST00000448192.1

DDX56-207, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-207ENST00000448192 CHP1Q99653 195 aa17.76■□□□□ 0.43
DDX56-207ENST00000448192 ZNF670Q9BS34 389 aa17.76■□□□□ 0.43
DDX56-207ENST00000448192 BOCQ9BWV1 1114 aa17.76■□□□□ 0.43
DDX56-207ENST00000448192 LCMT1Q9UIC8 334 aa17.76■□□□□ 0.43
DDX56-207ENST00000448192 CACNB4O00305 520 aaPredicted RBP17.75■□□□□ 0.43
DDX56-207ENST00000448192 MFAP3LO75121 409 aa17.75■□□□□ 0.43
DDX56-207ENST00000448192 KRT7P08729 469 aa17.75■□□□□ 0.43
DDX56-207ENST00000448192 ALPIP09923 528 aa17.75■□□□□ 0.43
DDX56-207ENST00000448192 GM2AP17900 193 aa17.75■□□□□ 0.43
DDX56-207ENST00000448192 NFKBIAP25963 317 aa17.75■□□□□ 0.43
DDX56-207ENST00000448192 VIPR1P32241 457 aa17.75■□□□□ 0.43
DDX56-207ENST00000448192 GARSP41250 739 aaKnown RBP17.75■□□□□ 0.43
DDX56-207ENST00000448192 GALNT2Q10471 571 aa17.75■□□□□ 0.43
DDX56-207ENST00000448192 RTP5Q14D33 572 aa17.75■□□□□ 0.43
DDX56-207ENST00000448192 COL28A1Q2UY09 1125 aa17.75■□□□□ 0.43
DDX56-207ENST00000448192 RALGPS1Q5JS13 557 aa17.75■□□□□ 0.43
DDX56-207ENST00000448192 CDCP2Q5VXM1 449 aa17.75■□□□□ 0.43
DDX56-207ENST00000448192 ESRP1Q6NXG1 681 aaKnown RBP17.75■□□□□ 0.43
DDX56-207ENST00000448192 CRTC1Q6UUV9 634 aa17.75■□□□□ 0.43
DDX56-207ENST00000448192 SLC35F3Q8IY50 421 aa17.75■□□□□ 0.43
DDX56-207ENST00000448192 FSTL5Q8N475 847 aaPredicted RBP17.75■□□□□ 0.43
DDX56-207ENST00000448192 SCG3Q8WXD2 468 aaKnown RBP17.75■□□□□ 0.43
DDX56-207ENST00000448192 FUBP1Q96AE4 644 aaKnown RBP17.75■□□□□ 0.43
DDX56-207ENST00000448192 CCDC42Q96M95 316 aa17.75■□□□□ 0.43
DDX56-207ENST00000448192 DEPDC7Q96QD5 511 aa17.75■□□□□ 0.43
DDX56-207ENST00000448192 NHEJ1Q9H9Q4 299 aaPredicted RBP17.75■□□□□ 0.43
DDX56-207ENST00000448192 SPTLC3Q9NUV7 552 aa17.75■□□□□ 0.43
DDX56-207ENST00000448192 SIRPGQ9P1W8 387 aa17.75■□□□□ 0.43
DDX56-207ENST00000448192 GULP1Q9UBP9 304 aa17.75■□□□□ 0.43
DDX56-207ENST00000448192 PHTF1Q9UMS5 762 aa17.75■□□□□ 0.43
DDX56-207ENST00000448192 PCDHB1Q9Y5F3 818 aa17.75■□□□□ 0.43
DDX56-207ENST00000448192 ASXL3Q9C0F0 2248 aa17.75■□□□□ 0.43
DDX56-207ENST00000448192 FAM208BQ5VWN6 2430 aa17.74■□□□□ 0.43
DDX56-207ENST00000448192 URB1O60287 2271 aaKnown RBP17.74■□□□□ 0.43
DDX56-207ENST00000448192 EME2A4GXA9 379 aaPredicted RBP17.74■□□□□ 0.43
DDX56-207ENST00000448192 TMEM202A6NGA9 273 aa17.74■□□□□ 0.43
DDX56-207ENST00000448192 CSO75390 466 aaKnown RBP17.74■□□□□ 0.43
DDX56-207ENST00000448192 TNFP01375 233 aa17.74■□□□□ 0.43
DDX56-207ENST00000448192 CYP2A6P11509 494 aaPredicted RBP17.74■□□□□ 0.43
DDX56-207ENST00000448192 TGM2P21980 687 aa17.74■□□□□ 0.43
DDX56-207ENST00000448192 MAN1A1P33908 653 aa17.74■□□□□ 0.43
DDX56-207ENST00000448192 CNGA3Q16281 694 aa17.74■□□□□ 0.43
DDX56-207ENST00000448192 IFI16Q16666 785 aaKnown RBP17.74■□□□□ 0.43
DDX56-207ENST00000448192 ARMC12Q5T9G4 340 aa17.74■□□□□ 0.43
DDX56-207ENST00000448192 TEX26Q8N6G2 289 aa17.74■□□□□ 0.43
DDX56-207ENST00000448192 SLC35G2Q8TBE7 412 aa17.74■□□□□ 0.43
DDX56-207ENST00000448192 LRRN4Q8WUT4 740 aa17.74■□□□□ 0.43
DDX56-207ENST00000448192 SPOCK2Q92563 424 aa17.74■□□□□ 0.43
DDX56-207ENST00000448192 NUS1Q96E22 293 aa17.74■□□□□ 0.43
DDX56-207ENST00000448192 PDXPQ96GD0 296 aa17.74■□□□□ 0.43
DDX56-207ENST00000448192 COQ10AQ96MF6 247 aa17.74■□□□□ 0.43
DDX56-207ENST00000448192 SEMA3CQ99985 751 aa17.74■□□□□ 0.43
DDX56-207ENST00000448192 TTLL3Q9Y4R7 772 aa17.74■□□□□ 0.43
DDX56-207ENST00000448192 RAI2Q9Y5P3 530 aa17.74■□□□□ 0.43
DDX56-207ENST00000448192 RP1P56715 2156 aa17.73■□□□□ 0.43
DDX56-207ENST00000448192 MATN3O15232 486 aa17.73■□□□□ 0.43
DDX56-207ENST00000448192 BRINP1O60477 761 aa17.73■□□□□ 0.43
DDX56-207ENST00000448192 HEXIM1O94992 359 aaKnown RBP17.73■□□□□ 0.43
DDX56-207ENST00000448192 PGLSO95336 258 aa17.73■□□□□ 0.43
DDX56-207ENST00000448192 CTPS1P17812 591 aa17.73■□□□□ 0.43
DDX56-207ENST00000448192 KELP23276 732 aa17.73■□□□□ 0.43
DDX56-207ENST00000448192 KIAA1024LP59773 190 aa17.73■□□□□ 0.43
DDX56-207ENST00000448192 PTPRRQ15256 657 aa17.73■□□□□ 0.43
DDX56-207ENST00000448192 PERM1Q5SV97 790 aa17.73■□□□□ 0.43
DDX56-207ENST00000448192 KCTD16Q68DU8 428 aa17.73■□□□□ 0.43
DDX56-207ENST00000448192 TIGD7Q6NT04 549 aaPredicted RBP17.73■□□□□ 0.43
DDX56-207ENST00000448192 PNCKQ6P2M8 343 aa17.73■□□□□ 0.43
DDX56-207ENST00000448192 GKN2Q86XP6 184 aa17.73■□□□□ 0.43
DDX56-207ENST00000448192 PELI3Q8N2H9 469 aa17.73■□□□□ 0.43
DDX56-207ENST00000448192 OR56A4Q8NGH8 313 aa17.73■□□□□ 0.43
DDX56-207ENST00000448192 OR1E3Q8WZA6 343 aa17.73■□□□□ 0.43
DDX56-207ENST00000448192 POLR1EQ9GZS1 481 aaKnown RBP17.73■□□□□ 0.43
DDX56-207ENST00000448192 WDR26Q9H7D7 661 aa17.73■□□□□ 0.43
DDX56-207ENST00000448192 FGF22Q9HCT0 170 aa17.73■□□□□ 0.43
DDX56-207ENST00000448192 MRPL40Q9NQ50 206 aaKnown RBP17.73■□□□□ 0.43
DDX56-207ENST00000448192 RBM22Q9NW64 420 aaKnown RBP eCLIP17.73■□□□□ 0.43
DDX56-207ENST00000448192 MOSPD1Q9UJG1 213 aa17.73■□□□□ 0.43
DDX56-207ENST00000448192 PADI4Q9UM07 663 aa17.73■□□□□ 0.43
DDX56-207ENST00000448192 GPR34Q9UPC5 381 aa17.73■□□□□ 0.43
DDX56-207ENST00000448192 COL27A1Q8IZC6 1860 aaPredicted RBP17.72■□□□□ 0.43
DDX56-207ENST00000448192 GOLGA6CA6NDK9 693 aa17.72■□□□□ 0.43
DDX56-207ENST00000448192 GOLGA6BA6NDN3 693 aa17.72■□□□□ 0.43
DDX56-207ENST00000448192 NPIPB15A6NHN6 443 aaPredicted RBP17.72■□□□□ 0.43
DDX56-207ENST00000448192 USP12O75317 370 aa17.72■□□□□ 0.43
DDX56-207ENST00000448192 GOLGA6DP0CG33 693 aa17.72■□□□□ 0.43
DDX56-207ENST00000448192 LHCGRP22888 699 aa17.72■□□□□ 0.43
DDX56-207ENST00000448192 KDELR1P24390 212 aa17.72■□□□□ 0.43
DDX56-207ENST00000448192 CCNCP24863 283 aa17.72■□□□□ 0.43
DDX56-207ENST00000448192 TRIM23P36406 574 aa17.72■□□□□ 0.43
DDX56-207ENST00000448192 ETV3P41162 512 aa17.72■□□□□ 0.43
DDX56-207ENST00000448192 GBE1Q04446 702 aa17.72■□□□□ 0.43
DDX56-207ENST00000448192 ARHGEF7Q14155 803 aa17.72■□□□□ 0.43
DDX56-207ENST00000448192 LVRNQ6Q4G3 990 aa17.72■□□□□ 0.43
DDX56-207ENST00000448192 USP45Q70EL2 814 aa17.72■□□□□ 0.43
DDX56-207ENST00000448192 HSD11B1LQ7Z5J1 315 aa17.72■□□□□ 0.43
DDX56-207ENST00000448192 PQLC3Q8N755 202 aa17.72■□□□□ 0.43
DDX56-207ENST00000448192 KYQ8NBH2 561 aa17.72■□□□□ 0.43
DDX56-207ENST00000448192 CCNYQ8ND76 341 aa17.72■□□□□ 0.43
DDX56-207ENST00000448192 TPCN2Q8NHX9 752 aa17.72■□□□□ 0.43
DDX56-207ENST00000448192 RAPGEF5Q92565 580 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms