RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 LGALS2P05162 132 aa7.8□□□□□ -1.16
NEDD9-204ENST00000448183 ENO2P09104 434 aaPredicted RBP7.8□□□□□ -1.16
NEDD9-204ENST00000448183 LPOP22079 712 aaPredicted RBP7.8□□□□□ -1.16
NEDD9-204ENST00000448183 RTP1P59025 263 aa7.8□□□□□ -1.16
NEDD9-204ENST00000448183 APOBEC3HQ6NTF7 200 aaKnown RBP7.8□□□□□ -1.16
NEDD9-204ENST00000448183 GK5Q6ZS86 529 aa7.8□□□□□ -1.16
NEDD9-204ENST00000448183 R3HCC1LQ7Z5L2 792 aaKnown RBP7.8□□□□□ -1.16
NEDD9-204ENST00000448183 THAP5Q7Z6K1 395 aa7.8□□□□□ -1.16
NEDD9-204ENST00000448183 DSELQ8IZU8 1212 aa7.8□□□□□ -1.16
NEDD9-204ENST00000448183 PGAM4Q8N0Y7 254 aa7.8□□□□□ -1.16
NEDD9-204ENST00000448183 PARP8Q8N3A8 854 aa7.8□□□□□ -1.16
NEDD9-204ENST00000448183 NAT14Q8WUY8 206 aa7.8□□□□□ -1.16
NEDD9-204ENST00000448183 FAR1Q8WVX9 515 aa7.8□□□□□ -1.16
NEDD9-204ENST00000448183 CLPTM1LQ96KA5 538 aa7.8□□□□□ -1.16
NEDD9-204ENST00000448183 TINF2Q9BSI4 451 aa7.8□□□□□ -1.16
NEDD9-204ENST00000448183 WDR18Q9BV38 432 aa7.8□□□□□ -1.16
NEDD9-204ENST00000448183 SAMD4AQ9UPU9 718 aaKnown RBP7.8□□□□□ -1.16
NEDD9-204ENST00000448183 MOXD2PA6NHM9 499 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 PSMD11O00231 422 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 QSOX1O00391 747 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 DNM1LO00429 736 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 DHX15O43143 795 aaKnown RBP7.79□□□□□ -1.16
NEDD9-204ENST00000448183 PAPSS1O43252 624 aaPredicted RBP7.79□□□□□ -1.16
NEDD9-204ENST00000448183 UGT2B11O75310 529 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 SERPINB7O75635 380 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 RGS20O76081 388 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 DHFRP00374 187 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 FGF1P05230 155 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 TPSB2P20231 275 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 MMP8P22894 467 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 TLX1P31314 330 aaPredicted RBP7.79□□□□□ -1.16
NEDD9-204ENST00000448183 ABL2P42684 1182 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 HNMTP50135 292 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 BCAP31P51572 246 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 CDK18Q07002 472 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 FCHO2Q0JRZ9 810 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 PLD1Q13393 1074 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 GALNT3Q14435 633 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 TPSAB1Q15661 275 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 PSMD5Q16401 504 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 HGSNATQ68CP4 663 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 UTS2BQ765I0 119 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 KIAA0319LQ8IZA0 1049 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 CPSF7Q8N684 471 aaKnown RBP7.79□□□□□ -1.16
NEDD9-204ENST00000448183 CNTD1Q8N815 330 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 VGLL2Q8N8G2 317 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 CERKQ8TCT0 537 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 NKD2Q969F2 451 aaPredicted RBP7.79□□□□□ -1.16
NEDD9-204ENST00000448183 ACO2Q99798 780 aaKnown RBP7.79□□□□□ -1.16
NEDD9-204ENST00000448183 PDCD10Q9BUL8 212 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 RHOBTB2Q9BYZ6 727 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 MUC13Q9H3R2 512 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 CAB39LQ9H9S4 337 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 STARD7Q9NQZ5 370 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 DKK3Q9UBP4 350 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 ZNHIT2Q9UHR6 403 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 ADGRE2Q9UHX3 823 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 TRPV2Q9Y5S1 764 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 ITSN1Q15811 1721 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 SIN3BO75182 1162 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 CCNKO75909 580 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 SPATA31C1P0DKV0 1188 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 CYP4B1P13584 511 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 PSEN2P49810 448 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 WNT3AP56704 352 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 FSTL1Q12841 308 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 TRIM32Q13049 653 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 CAPSQ13938 189 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 ANXA8L1Q5VT79 327 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 GALNT18Q6P9A2 607 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 PTCHD4Q6ZW05 846 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 RD3Q7Z3Z2 195 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 SPATA19Q7Z5L4 167 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 LPGAT1Q92604 370 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 MFSD14AQ96MC6 490 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 PCDHB18PQ96TA0 734 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 FNDC11Q9BVV2 318 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 MRPL9Q9BYD2 267 aaKnown RBP7.79□□□□□ -1.16
NEDD9-204ENST00000448183 ADARB2Q9NS39 739 aaKnown RBP7.79□□□□□ -1.16
NEDD9-204ENST00000448183 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.79□□□□□ -1.16
NEDD9-204ENST00000448183 DNAJC28Q9NX36 388 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 N6AMT1Q9Y5N5 214 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 PPLO60437 1756 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 HLA-DQA2P01906 255 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 SLC6A2P23975 617 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 STARP49675 285 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 SNRPD1P62314 119 aaKnown RBP7.79□□□□□ -1.16
NEDD9-204ENST00000448183 PUDPQ08623 228 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 LYPLAL1Q5VWZ2 237 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 GLYATQ6IB77 296 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 TAPT1Q6NXT6 567 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 DOK6Q6PKX4 331 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 ADGRD1Q6QNK2 874 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 SIX5Q8N196 739 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 PDPRQ8NCN5 879 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 OR4L1Q8NH43 312 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 JOSD2Q8TAC2 188 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 TEX47Q8TBZ9 253 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 HELQQ8TDG4 1101 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 TDRD1Q9BXT4 1180 aaKnown RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms