RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 OCIAD1Q9NX40 245 aa3.32□□□□□ -1.88
PMS1-215ENST00000447232 CLIC5Q9NZA1 410 aa3.32□□□□□ -1.88
PMS1-215ENST00000447232 SIRPGQ9P1W8 387 aa3.32□□□□□ -1.88
PMS1-215ENST00000447232 RCAN3Q9UKA8 241 aa3.32□□□□□ -1.88
PMS1-215ENST00000447232 AGO2Q9UKV8 859 aaKnown RBP3.32□□□□□ -1.88
PMS1-215ENST00000447232 NTNG1Q9Y2I2 539 aa3.32□□□□□ -1.88
PMS1-215ENST00000447232 RPS6KL1Q9Y6S9 549 aa3.32□□□□□ -1.88
PMS1-215ENST00000447232 MEGF8Q7Z7M0 2845 aa3.32□□□□□ -1.88
PMS1-215ENST00000447232 A6NCN8 305 aa3.32□□□□□ -1.88
PMS1-215ENST00000447232 HHLA1C9JL84 531 aa3.32□□□□□ -1.88
PMS1-215ENST00000447232 C19orf84I3L1E1 186 aa3.32□□□□□ -1.88
PMS1-215ENST00000447232 B4GAT1O43505 415 aa3.32□□□□□ -1.88
PMS1-215ENST00000447232 HEXAP06865 529 aa3.32□□□□□ -1.88
PMS1-215ENST00000447232 HMBSP08397 361 aa3.32□□□□□ -1.88
PMS1-215ENST00000447232 KRT19P08727 400 aa3.32□□□□□ -1.88
PMS1-215ENST00000447232 PLA2G4BP0C869 781 aa3.32□□□□□ -1.88
PMS1-215ENST00000447232 DNAJA1P31689 397 aaKnown RBP3.32□□□□□ -1.88
PMS1-215ENST00000447232 CCT6AP40227 531 aaKnown RBP3.32□□□□□ -1.88
PMS1-215ENST00000447232 ETV3P41162 512 aa3.32□□□□□ -1.88
PMS1-215ENST00000447232 THOP1P52888 689 aa3.32□□□□□ -1.88
PMS1-215ENST00000447232 LIMK2P53671 638 aa3.32□□□□□ -1.88
PMS1-215ENST00000447232 CCT2P78371 535 aaKnown RBP3.32□□□□□ -1.88
PMS1-215ENST00000447232 ZNF235Q14590 738 aa3.32□□□□□ -1.88
PMS1-215ENST00000447232 MAP9Q49MG5 647 aa3.32□□□□□ -1.88
PMS1-215ENST00000447232 FAM46CQ5VWP2 391 aa3.32□□□□□ -1.88
PMS1-215ENST00000447232 KDELC2Q7Z4H8 507 aa3.32□□□□□ -1.88
PMS1-215ENST00000447232 FJX1Q86VR8 437 aa3.32□□□□□ -1.88
PMS1-215ENST00000447232 LSRQ86X29 649 aaPredicted RBP3.32□□□□□ -1.88
PMS1-215ENST00000447232 BRSK2Q8IWQ3 736 aa3.32□□□□□ -1.88
PMS1-215ENST00000447232 RHOT1Q8IXI2 618 aa3.32□□□□□ -1.88
PMS1-215ENST00000447232 ZNF808Q8N4W9 903 aaPredicted RBP3.32□□□□□ -1.88
PMS1-215ENST00000447232 FIBINQ8TAL6 211 aa3.32□□□□□ -1.88
PMS1-215ENST00000447232 CACTINQ8WUQ7 758 aaKnown RBP3.32□□□□□ -1.88
PMS1-215ENST00000447232 KCTD13Q8WZ19 329 aa3.32□□□□□ -1.88
PMS1-215ENST00000447232 NINJ1Q92982 152 aa3.32□□□□□ -1.88
PMS1-215ENST00000447232 LENG8Q96PV6 779 aaPredicted RBP3.32□□□□□ -1.88
PMS1-215ENST00000447232 DIRC2Q96SL1 478 aa3.32□□□□□ -1.88
PMS1-215ENST00000447232 NUDT22Q9BRQ3 303 aa3.32□□□□□ -1.88
PMS1-215ENST00000447232 SLC13A1Q9BZW2 595 aa3.32□□□□□ -1.88
PMS1-215ENST00000447232 MTMR12Q9C0I1 747 aa3.32□□□□□ -1.88
PMS1-215ENST00000447232 SNX25Q9H3E2 840 aa3.32□□□□□ -1.88
PMS1-215ENST00000447232 TMEM59LQ9UK28 342 aa3.32□□□□□ -1.88
PMS1-215ENST00000447232 ADAM30Q9UKF2 790 aa3.32□□□□□ -1.88
PMS1-215ENST00000447232 KIF3AQ9Y496 699 aa3.32□□□□□ -1.88
PMS1-215ENST00000447232 PCDHGA6Q9Y5G7 932 aa3.32□□□□□ -1.88
PMS1-215ENST00000447232 CORINQ9Y5Q5 1042 aa3.32□□□□□ -1.88
PMS1-215ENST00000447232 ATP8B3O60423 1300 aa3.32□□□□□ -1.88
PMS1-215ENST00000447232 TGP01266 2768 aa3.31□□□□□ -1.88
PMS1-215ENST00000447232 CACNA1CQ13936 2221 aa3.31□□□□□ -1.88
PMS1-215ENST00000447232 INPP4BO15327 924 aa3.31□□□□□ -1.88
PMS1-215ENST00000447232 NUDT21O43809 227 aaKnown RBP3.31□□□□□ -1.88
PMS1-215ENST00000447232 CREG1O75629 220 aa3.31□□□□□ -1.88
PMS1-215ENST00000447232 STK17BO94768 372 aa3.31□□□□□ -1.88
PMS1-215ENST00000447232 LATS1O95835 1130 aa3.31□□□□□ -1.88
PMS1-215ENST00000447232 HMGB1P09429 215 aaKnown RBP3.31□□□□□ -1.88
PMS1-215ENST00000447232 THRAP10827 490 aa3.31□□□□□ -1.88
PMS1-215ENST00000447232 CPA1P15085 419 aa3.31□□□□□ -1.88
PMS1-215ENST00000447232 DLSTP36957 453 aa3.31□□□□□ -1.88
PMS1-215ENST00000447232 HLTFQ14527 1009 aaKnown RBP eCLIP3.31□□□□□ -1.881e-6■■■□□ 16.5
PMS1-215ENST00000447232 NR1D2Q14995 579 aa3.31□□□□□ -1.88
PMS1-215ENST00000447232 EDRF1Q3B7T1 1238 aa3.31□□□□□ -1.88
PMS1-215ENST00000447232 PITRM1Q5JRX3 1037 aa3.31□□□□□ -1.88
PMS1-215ENST00000447232 ADGRF1Q5T601 910 aa3.31□□□□□ -1.88
PMS1-215ENST00000447232 SLFN12LQ6IEE8 588 aa3.31□□□□□ -1.88
PMS1-215ENST00000447232 LCNL1Q6ZST4 164 aa3.31□□□□□ -1.88
PMS1-215ENST00000447232 KCNK18Q7Z418 384 aa3.31□□□□□ -1.88
PMS1-215ENST00000447232 ESX1Q8N693 406 aa3.31□□□□□ -1.88
PMS1-215ENST00000447232 ZNF557Q8N988 423 aaPredicted RBP3.31□□□□□ -1.88
PMS1-215ENST00000447232 FBXO15Q8NCQ5 510 aaPredicted RBP3.31□□□□□ -1.88
PMS1-215ENST00000447232 PHC3Q8NDX5 983 aa3.31□□□□□ -1.88
PMS1-215ENST00000447232 ABHD4Q8TB40 342 aa3.31□□□□□ -1.88
PMS1-215ENST00000447232 HVCN1Q96D96 273 aa3.31□□□□□ -1.88
PMS1-215ENST00000447232 FIZ1Q96SL8 496 aa3.31□□□□□ -1.88
PMS1-215ENST00000447232 CDK5RAP1Q96SZ6 601 aaKnown RBP3.31□□□□□ -1.88
PMS1-215ENST00000447232 TREX2Q9BQ50 279 aaPredicted RBP3.31□□□□□ -1.88
PMS1-215ENST00000447232 ZPBPQ9BS86 351 aa3.31□□□□□ -1.88
PMS1-215ENST00000447232 SLC17A9Q9BYT1 436 aa3.31□□□□□ -1.88
PMS1-215ENST00000447232 LARSQ9P2J5 1176 aaKnown RBP3.31□□□□□ -1.88
PMS1-215ENST00000447232 IPO11Q9UI26 975 aaKnown RBP3.31□□□□□ -1.88
PMS1-215ENST00000447232 RASAL2Q9UJF2 1139 aa3.31□□□□□ -1.88
PMS1-215ENST00000447232 GPR34Q9UPC5 381 aa3.31□□□□□ -1.88
PMS1-215ENST00000447232 DNM3Q9UQ16 869 aa3.31□□□□□ -1.88
PMS1-215ENST00000447232 NOTCH1P46531 2555 aa3.31□□□□□ -1.88
PMS1-215ENST00000447232 C1QTNF3-AMACRE9PGA6 284 aa3.31□□□□□ -1.88
PMS1-215ENST00000447232 MCF2LO15068 1137 aa3.31□□□□□ -1.88
PMS1-215ENST00000447232 ALOX15BO15296 676 aa3.31□□□□□ -1.88
PMS1-215ENST00000447232 PAK4O96013 591 aaPredicted RBP3.31□□□□□ -1.88
PMS1-215ENST00000447232 ALPIP09923 528 aa3.31□□□□□ -1.88
PMS1-215ENST00000447232 TPP2P29144 1249 aaPredicted RBP3.31□□□□□ -1.88
PMS1-215ENST00000447232 HNRNPH3P31942 346 aaKnown RBP3.31□□□□□ -1.88
PMS1-215ENST00000447232 STK19P49842 368 aaPredicted RBP3.31□□□□□ -1.88
PMS1-215ENST00000447232 HK2P52789 917 aa3.31□□□□□ -1.88
PMS1-215ENST00000447232 GTF2BQ00403 316 aa3.31□□□□□ -1.88
PMS1-215ENST00000447232 ECT2LQ008S8 904 aa3.31□□□□□ -1.88
PMS1-215ENST00000447232 MC2RQ01718 297 aa3.31□□□□□ -1.88
PMS1-215ENST00000447232 EFEMP1Q12805 493 aa3.31□□□□□ -1.88
PMS1-215ENST00000447232 CHAF1BQ13112 559 aa3.31□□□□□ -1.88
PMS1-215ENST00000447232 SQSTM1Q13501 440 aa3.31□□□□□ -1.88
PMS1-215ENST00000447232 ELOCQ15369 112 aa3.31□□□□□ -1.88
PMS1-215ENST00000447232 PIK3R6Q5UE93 754 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms