RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 ALX3O95076 343 aa13.14□□□□□ -0.31
DDX56-206ENST00000446987 ERBB2P04626 1255 aa13.14□□□□□ -0.31
DDX56-206ENST00000446987 ABCB1P08183 1280 aaPredicted RBP13.14□□□□□ -0.31
DDX56-206ENST00000446987 INHBAP08476 426 aa13.14□□□□□ -0.31
DDX56-206ENST00000446987 COX4I1P13073 169 aa13.14□□□□□ -0.31
DDX56-206ENST00000446987 CPB1P15086 417 aa13.14□□□□□ -0.31
DDX56-206ENST00000446987 CCNA2P20248 432 aa13.14□□□□□ -0.31
DDX56-206ENST00000446987 MZF1P28698 734 aaPredicted RBP13.14□□□□□ -0.31
DDX56-206ENST00000446987 RCVRNP35243 200 aa13.14□□□□□ -0.31
DDX56-206ENST00000446987 THOP1P52888 689 aa13.14□□□□□ -0.31
DDX56-206ENST00000446987 C19orf57Q0VDD7 668 aa13.14□□□□□ -0.31
DDX56-206ENST00000446987 CDC20Q12834 499 aa13.14□□□□□ -0.31
DDX56-206ENST00000446987 EIF2B5Q13144 721 aaKnown RBP13.14□□□□□ -0.31
DDX56-206ENST00000446987 INTS6LQ5JSJ4 861 aaKnown RBP13.14□□□□□ -0.31
DDX56-206ENST00000446987 C4orf22Q6V702 233 aa13.14□□□□□ -0.31
DDX56-206ENST00000446987 CPNE8Q86YQ8 564 aa13.14□□□□□ -0.31
DDX56-206ENST00000446987 FAM20CQ8IXL6 584 aa13.14□□□□□ -0.31
DDX56-206ENST00000446987 SIX6OS1Q8N1H7 587 aa13.14□□□□□ -0.31
DDX56-206ENST00000446987 UBR7Q8N806 425 aa13.14□□□□□ -0.31
DDX56-206ENST00000446987 HIPK4Q8NE63 616 aa13.14□□□□□ -0.31
DDX56-206ENST00000446987 SLC7A14Q8TBB6 771 aa13.14□□□□□ -0.31
DDX56-206ENST00000446987 HCAR2Q8TDS4 363 aa13.14□□□□□ -0.31
DDX56-206ENST00000446987 STON2Q8WXE9 905 aa13.14□□□□□ -0.31
DDX56-206ENST00000446987 BTBD6Q96KE9 485 aa13.14□□□□□ -0.31
DDX56-206ENST00000446987 PGLYRP2Q96PD5 576 aa13.14□□□□□ -0.31
DDX56-206ENST00000446987 TWNKQ96RR1 684 aa13.14□□□□□ -0.31
DDX56-206ENST00000446987 UHRF1Q96T88 793 aaPredicted RBP13.14□□□□□ -0.31
DDX56-206ENST00000446987 ACBD6Q9BR61 282 aa13.14□□□□□ -0.31
DDX56-206ENST00000446987 TMEM79Q9BSE2 394 aa13.14□□□□□ -0.31
DDX56-206ENST00000446987 NIF3L1Q9GZT8 377 aa13.14□□□□□ -0.31
DDX56-206ENST00000446987 SFXN1Q9H9B4 322 aa13.14□□□□□ -0.31
DDX56-206ENST00000446987 COPS7BQ9H9Q2 264 aaPredicted RBP13.14□□□□□ -0.31
DDX56-206ENST00000446987 HMG20AQ9NP66 347 aa13.14□□□□□ -0.31
DDX56-206ENST00000446987 AFF4Q9UHB7 1163 aaKnown RBP13.14□□□□□ -0.31
DDX56-206ENST00000446987 CORINQ9Y5Q5 1042 aa13.14□□□□□ -0.31
DDX56-206ENST00000446987 A0A1B0GTW7 788 aa13.14□□□□□ -0.31
DDX56-206ENST00000446987 C7orf72A4D263 438 aa13.14□□□□□ -0.31
DDX56-206ENST00000446987 GUCY1B2O75343 617 aa13.14□□□□□ -0.31
DDX56-206ENST00000446987 KRT37O76014 449 aa13.14□□□□□ -0.31
DDX56-206ENST00000446987 C8AP07357 584 aa13.14□□□□□ -0.31
DDX56-206ENST00000446987 WEE2P0C1S8 567 aa13.14□□□□□ -0.31
DDX56-206ENST00000446987 TGM1P22735 817 aa13.14□□□□□ -0.31
DDX56-206ENST00000446987 ADSLP30566 484 aaPredicted RBP13.14□□□□□ -0.31
DDX56-206ENST00000446987 FMO1Q01740 532 aa13.14□□□□□ -0.31
DDX56-206ENST00000446987 INCA1Q0VD86 236 aa13.14□□□□□ -0.31
DDX56-206ENST00000446987 BNIP3Q12983 259 aa13.14□□□□□ -0.31
DDX56-206ENST00000446987 SMAD4Q13485 552 aaKnown RBP13.14□□□□□ -0.31
DDX56-206ENST00000446987 SLC39A12Q504Y0 691 aa13.14□□□□□ -0.31
DDX56-206ENST00000446987 PIGGQ5H8A4 983 aa13.14□□□□□ -0.31
DDX56-206ENST00000446987 TPGS2Q68CL5 300 aa13.14□□□□□ -0.31
DDX56-206ENST00000446987 C16orf46Q6P387 395 aa13.14□□□□□ -0.31
DDX56-206ENST00000446987 FAM171BQ6P995 826 aa13.14□□□□□ -0.31
DDX56-206ENST00000446987 TMC5Q6UXY8 1006 aa13.14□□□□□ -0.31
DDX56-206ENST00000446987 METTL23Q86XA0 190 aa13.14□□□□□ -0.31
DDX56-206ENST00000446987 GALNT13Q8IUC8 556 aa13.14□□□□□ -0.31
DDX56-206ENST00000446987 PALM2Q8IXS6 379 aa13.14□□□□□ -0.31
DDX56-206ENST00000446987 TCEAL8Q8IYN2 117 aa13.14□□□□□ -0.31
DDX56-206ENST00000446987 ATAD1Q8NBU5 361 aa13.14□□□□□ -0.31
DDX56-206ENST00000446987 CMASQ8NFW8 434 aaPredicted RBP13.14□□□□□ -0.31
DDX56-206ENST00000446987 ACMSDQ8TDX5 336 aa13.14□□□□□ -0.31
DDX56-206ENST00000446987 PDCD6IPQ8WUM4 868 aaKnown RBP13.14□□□□□ -0.31
DDX56-206ENST00000446987 TTC9Q92623 222 aa13.14□□□□□ -0.31
DDX56-206ENST00000446987 EBF4Q9BQW3 602 aa13.14□□□□□ -0.31
DDX56-206ENST00000446987 SLC39A3Q9BRY0 314 aa13.14□□□□□ -0.31
DDX56-206ENST00000446987 CPNE5Q9HCH3 593 aa13.14□□□□□ -0.31
DDX56-206ENST00000446987 MRPL40Q9NQ50 206 aaKnown RBP13.14□□□□□ -0.31
DDX56-206ENST00000446987 C8orf4Q9NR00 106 aa13.14□□□□□ -0.31
DDX56-206ENST00000446987 ANAPC7Q9UJX3 599 aa13.14□□□□□ -0.31
DDX56-206ENST00000446987 FBXO9Q9UK97 447 aaPredicted RBP13.14□□□□□ -0.31
DDX56-206ENST00000446987 POU2F3Q9UKI9 436 aa13.14□□□□□ -0.31
DDX56-206ENST00000446987 MYBPHLA2RUH7 354 aa13.13□□□□□ -0.31
DDX56-206ENST00000446987 NRG2O14511 850 aaPredicted RBP13.13□□□□□ -0.31
DDX56-206ENST00000446987 JRKO75564 520 aa13.13□□□□□ -0.31
DDX56-206ENST00000446987 SORBS2O94875 1100 aaKnown RBP13.13□□□□□ -0.31
DDX56-206ENST00000446987 PROSCO94903 275 aa13.13□□□□□ -0.31
DDX56-206ENST00000446987 CRYZL1O95825 349 aa13.13□□□□□ -0.31
DDX56-206ENST00000446987 BCL10O95999 233 aa13.13□□□□□ -0.31
DDX56-206ENST00000446987 C7P10643 843 aa13.13□□□□□ -0.31
DDX56-206ENST00000446987 IL9P15248 144 aa13.13□□□□□ -0.31
DDX56-206ENST00000446987 HOXB8P17481 243 aaPredicted RBP13.13□□□□□ -0.31
DDX56-206ENST00000446987 MYF6P23409 242 aa13.13□□□□□ -0.31
DDX56-206ENST00000446987 SSTR1P30872 391 aa13.13□□□□□ -0.31
DDX56-206ENST00000446987 LHX1P48742 406 aa13.13□□□□□ -0.31
DDX56-206ENST00000446987 MRPS22P82650 360 aaKnown RBP13.13□□□□□ -0.31
DDX56-206ENST00000446987 LRP8Q14114 963 aa13.13□□□□□ -0.31
DDX56-206ENST00000446987 RFTN1Q14699 578 aaPredicted RBP13.13□□□□□ -0.31
DDX56-206ENST00000446987 FGD3Q5JSP0 725 aa13.13□□□□□ -0.31
DDX56-206ENST00000446987 PDPK2PQ6A1A2 396 aa13.13□□□□□ -0.31
DDX56-206ENST00000446987 FRMD7Q6ZUT3 714 aa13.13□□□□□ -0.31
DDX56-206ENST00000446987 SLC26A11Q86WA9 606 aa13.13□□□□□ -0.31
DDX56-206ENST00000446987 ARHGEF19Q8IW93 802 aa13.13□□□□□ -0.31
DDX56-206ENST00000446987 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.13□□□□□ -0.31
DDX56-206ENST00000446987 MFSD2AQ8NA29 543 aa13.13□□□□□ -0.31
DDX56-206ENST00000446987 KAT5Q92993 513 aa13.13□□□□□ -0.31
DDX56-206ENST00000446987 KLF6Q99612 283 aaPredicted RBP13.13□□□□□ -0.31
DDX56-206ENST00000446987 RHOBTB2Q9BYZ6 727 aa13.13□□□□□ -0.31
DDX56-206ENST00000446987 MARCH7Q9H992 704 aa13.13□□□□□ -0.31
DDX56-206ENST00000446987 UBE2TQ9NPD8 197 aaPredicted RBP13.13□□□□□ -0.31
DDX56-206ENST00000446987 TMEM30AQ9NV96 361 aa13.13□□□□□ -0.31
DDX56-206ENST00000446987 VPS51Q9UID3 782 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms