RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 ZNF8P17098 575 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P48-201ENST00000446155 IFNAR1P17181 557 aa4.61□□□□□ -1.67
HMGB1P48-201ENST00000446155 CAPZA2P47755 286 aa4.61□□□□□ -1.67
HMGB1P48-201ENST00000446155 NRIP1P48552 1158 aa4.61□□□□□ -1.67
HMGB1P48-201ENST00000446155 ALDH7A1P49419 539 aaKnown RBP4.61□□□□□ -1.67
HMGB1P48-201ENST00000446155 MMP14P50281 582 aa4.61□□□□□ -1.67
HMGB1P48-201ENST00000446155 CLCNKBP51801 687 aa4.61□□□□□ -1.67
HMGB1P48-201ENST00000446155 MRPL12P52815 198 aaKnown RBP4.61□□□□□ -1.67
HMGB1P48-201ENST00000446155 RRP1P56182 461 aaKnown RBP4.61□□□□□ -1.67
HMGB1P48-201ENST00000446155 GAD2Q05329 585 aa4.61□□□□□ -1.67
HMGB1P48-201ENST00000446155 LAMB3Q13751 1172 aa4.61□□□□□ -1.67
HMGB1P48-201ENST00000446155 PCLAFQ15004 111 aa4.61□□□□□ -1.67
HMGB1P48-201ENST00000446155 ME3Q16798 604 aa4.61□□□□□ -1.67
HMGB1P48-201ENST00000446155 LEXMQ3ZCV2 418 aa4.61□□□□□ -1.67
HMGB1P48-201ENST00000446155 GKAP1Q5VSY0 366 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P48-201ENST00000446155 TMEM71Q6P5X7 295 aa4.61□□□□□ -1.67
HMGB1P48-201ENST00000446155 DCLRE1AQ6PJP8 1040 aa4.61□□□□□ -1.67
HMGB1P48-201ENST00000446155 SLC46A3Q7Z3Q1 461 aa4.61□□□□□ -1.67
HMGB1P48-201ENST00000446155 CCDC91Q7Z6B0 441 aa4.61□□□□□ -1.67
HMGB1P48-201ENST00000446155 DNAAF5Q86Y56 855 aa4.61□□□□□ -1.67
HMGB1P48-201ENST00000446155 ARHGAP12Q8IWW6 846 aa4.61□□□□□ -1.67
HMGB1P48-201ENST00000446155 ZDHHC23Q8IYP9 409 aa4.61□□□□□ -1.67
HMGB1P48-201ENST00000446155 TDRD5Q8NAT2 981 aaKnown RBP4.61□□□□□ -1.67
HMGB1P48-201ENST00000446155 POGLUT1Q8NBL1 392 aa4.61□□□□□ -1.67
HMGB1P48-201ENST00000446155 TMEM174Q8WUU8 243 aa4.61□□□□□ -1.67
HMGB1P48-201ENST00000446155 PRPF31Q8WWY3 499 aaKnown RBP4.61□□□□□ -1.67
HMGB1P48-201ENST00000446155 INPP5DQ92835 1189 aa4.61□□□□□ -1.67
HMGB1P48-201ENST00000446155 MAP7D2Q96T17 732 aa4.61□□□□□ -1.67
HMGB1P48-201ENST00000446155 HGH1Q9BTY7 390 aa4.61□□□□□ -1.67
HMGB1P48-201ENST00000446155 STRA6Q9BX79 667 aa4.61□□□□□ -1.67
HMGB1P48-201ENST00000446155 KLHL4Q9C0H6 718 aa4.61□□□□□ -1.67
HMGB1P48-201ENST00000446155 B3GNT4Q9C0J1 378 aa4.61□□□□□ -1.67
HMGB1P48-201ENST00000446155 TASP1Q9H6P5 420 aa4.61□□□□□ -1.67
HMGB1P48-201ENST00000446155 POLR1BQ9H9Y6 1135 aa4.61□□□□□ -1.67
HMGB1P48-201ENST00000446155 HSPB7Q9UBY9 170 aa4.61□□□□□ -1.67
HMGB1P48-201ENST00000446155 MKLN1Q9UL63 735 aa4.61□□□□□ -1.67
HMGB1P48-201ENST00000446155 CCL27Q9Y4X3 112 aa4.61□□□□□ -1.67
HMGB1P48-201ENST00000446155 RAI2Q9Y5P3 530 aa4.61□□□□□ -1.67
HMGB1P48-201ENST00000446155 SLC4A4Q9Y6R1 1079 aa4.61□□□□□ -1.67
HMGB1P48-201ENST00000446155 IGLV5-39A0A0G2JS06 123 aa4.6□□□□□ -1.67
HMGB1P48-201ENST00000446155 TMEM272A0A1B0GTI8 110 aa4.6□□□□□ -1.67
HMGB1P48-201ENST00000446155 A0A1W2PQF6 199 aa4.6□□□□□ -1.67
HMGB1P48-201ENST00000446155 C17orf102A2RUQ5 167 aa4.6□□□□□ -1.67
HMGB1P48-201ENST00000446155 BTBD18B2RXH4 712 aa4.6□□□□□ -1.67
HMGB1P48-201ENST00000446155 TAF4O00268 1085 aa4.6□□□□□ -1.67
HMGB1P48-201ENST00000446155 CTDSP2O14595 271 aa4.6□□□□□ -1.67
HMGB1P48-201ENST00000446155 PAGE4O60829 102 aa4.6□□□□□ -1.67
HMGB1P48-201ENST00000446155 GGPS1O95749 300 aa4.6□□□□□ -1.67
HMGB1P48-201ENST00000446155 TOMM40O96008 361 aa4.6□□□□□ -1.67
HMGB1P48-201ENST00000446155 KLKB1P03952 638 aa4.6□□□□□ -1.67
HMGB1P48-201ENST00000446155 RB1P06400 928 aa4.6□□□□□ -1.67
HMGB1P48-201ENST00000446155 ATP5BP06576 529 aaKnown RBP4.6□□□□□ -1.67
HMGB1P48-201ENST00000446155 SELLP14151 372 aa4.6□□□□□ -1.67
HMGB1P48-201ENST00000446155 YWHAQP27348 245 aa4.6□□□□□ -1.67
HMGB1P48-201ENST00000446155 RASSF2P50749 326 aa4.6□□□□□ -1.67
HMGB1P48-201ENST00000446155 CEBPZQ03701 1054 aaKnown RBP4.6□□□□□ -1.67
HMGB1P48-201ENST00000446155 SLC18A2Q05940 514 aa4.6□□□□□ -1.67
HMGB1P48-201ENST00000446155 ADIPOQQ15848 244 aa4.6□□□□□ -1.67
HMGB1P48-201ENST00000446155 GSTA3Q16772 222 aa4.6□□□□□ -1.67
HMGB1P48-201ENST00000446155 DPCR1Q3MIW9 517 aa4.6□□□□□ -1.67
HMGB1P48-201ENST00000446155 SERPINA11Q86U17 422 aa4.6□□□□□ -1.67
HMGB1P48-201ENST00000446155 TICAM1Q8IUC6 712 aa4.6□□□□□ -1.67
HMGB1P48-201ENST00000446155 KIAA2013Q8IYS2 634 aa4.6□□□□□ -1.67
HMGB1P48-201ENST00000446155 DPP10Q8N608 796 aa4.6□□□□□ -1.67
HMGB1P48-201ENST00000446155 LRRC57Q8N9N7 239 aa4.6□□□□□ -1.67
HMGB1P48-201ENST00000446155 ZBTB8BQ8NAP8 495 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P48-201ENST00000446155 BICD2Q8TD16 824 aa4.6□□□□□ -1.67
HMGB1P48-201ENST00000446155 NEK9Q8TD19 979 aa4.6□□□□□ -1.67
HMGB1P48-201ENST00000446155 MGARPQ8TDB4 240 aa4.6□□□□□ -1.67
HMGB1P48-201ENST00000446155 TMEM170AQ8WVE7 144 aa4.6□□□□□ -1.67
HMGB1P48-201ENST00000446155 HSPH1Q92598 858 aa4.6□□□□□ -1.67
HMGB1P48-201ENST00000446155 SNX21Q969T3 373 aa4.6□□□□□ -1.67
HMGB1P48-201ENST00000446155 PGAM5Q96HS1 289 aa4.6□□□□□ -1.67
HMGB1P48-201ENST00000446155 GCNAQ96QF7 691 aa4.6□□□□□ -1.67
HMGB1P48-201ENST00000446155 WDR77Q9BQA1 342 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P48-201ENST00000446155 HEMGNQ9BXL5 484 aa4.6□□□□□ -1.67
HMGB1P48-201ENST00000446155 KLHL31Q9H511 634 aa4.6□□□□□ -1.67
HMGB1P48-201ENST00000446155 SLC32A1Q9H598 525 aa4.6□□□□□ -1.67
HMGB1P48-201ENST00000446155 FBRSL1Q9HCM7 1045 aaKnown RBP4.6□□□□□ -1.67
HMGB1P48-201ENST00000446155 LTB4R2Q9NPC1 389 aa4.6□□□□□ -1.67
HMGB1P48-201ENST00000446155 FZD3Q9NPG1 666 aa4.6□□□□□ -1.67
HMGB1P48-201ENST00000446155 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.6□□□□□ -1.67
HMGB1P48-201ENST00000446155 RNF7Q9UBF6 113 aa4.6□□□□□ -1.67
HMGB1P48-201ENST00000446155 ANAPC5Q9UJX4 755 aa4.6□□□□□ -1.67
HMGB1P48-201ENST00000446155 INTS6Q9UL03 887 aaKnown RBP4.6□□□□□ -1.67
HMGB1P48-201ENST00000446155 SESN1Q9Y6P5 492 aa4.6□□□□□ -1.67
HMGB1P48-201ENST00000446155 CC2D2AQ9P2K1 1620 aa4.6□□□□□ -1.67
HMGB1P48-201ENST00000446155 DDTLA6NHG4 134 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P48-201ENST00000446155 CBY3A6NI87 242 aa4.59□□□□□ -1.67
HMGB1P48-201ENST00000446155 EIF3CLB5ME19 914 aaKnown RBP4.59□□□□□ -1.67
HMGB1P48-201ENST00000446155 FAM157AC9JC47 383 aa4.59□□□□□ -1.67
HMGB1P48-201ENST00000446155 LIASO43766 372 aa4.59□□□□□ -1.67
HMGB1P48-201ENST00000446155 CEP104O60308 925 aa4.59□□□□□ -1.67
HMGB1P48-201ENST00000446155 TACC1O75410 805 aa4.59□□□□□ -1.67
HMGB1P48-201ENST00000446155 SLU7O95391 586 aaKnown RBP4.59□□□□□ -1.67
HMGB1P48-201ENST00000446155 CBX6O95503 412 aa4.59□□□□□ -1.67
HMGB1P48-201ENST00000446155 GALTP07902 379 aa4.59□□□□□ -1.67
HMGB1P48-201ENST00000446155 MYBL1P10243 752 aa4.59□□□□□ -1.67
HMGB1P48-201ENST00000446155 GABRB1P18505 474 aa4.59□□□□□ -1.67
HMGB1P48-201ENST00000446155 PTGER1P34995 402 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms