RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 LAMP2P13473 410 aa4.63□□□□□ -1.67
HMGB3P6-201ENST00000444896 CHATP28329 748 aa4.63□□□□□ -1.67
HMGB3P6-201ENST00000444896 SETQ01105 290 aaPredicted RBP4.63□□□□□ -1.67
HMGB3P6-201ENST00000444896 TRAF3Q13114 568 aa4.63□□□□□ -1.67
HMGB3P6-201ENST00000444896 OLIG2Q13516 323 aa4.63□□□□□ -1.67
HMGB3P6-201ENST00000444896 FRG1Q14331 258 aaKnown RBP4.63□□□□□ -1.67
HMGB3P6-201ENST00000444896 HYIQ5T013 277 aa4.63□□□□□ -1.67
HMGB3P6-201ENST00000444896 NEK10Q6ZWH5 1172 aa4.63□□□□□ -1.67
HMGB3P6-201ENST00000444896 MTSS1LQ765P7 747 aa4.63□□□□□ -1.67
HMGB3P6-201ENST00000444896 HAPLN4Q86UW8 402 aa4.63□□□□□ -1.67
HMGB3P6-201ENST00000444896 GLCCI1Q86VQ1 547 aa4.63□□□□□ -1.67
HMGB3P6-201ENST00000444896 CCDC105Q8IYK2 499 aa4.63□□□□□ -1.67
HMGB3P6-201ENST00000444896 AADATQ8N5Z0 425 aa4.63□□□□□ -1.67
HMGB3P6-201ENST00000444896 BEST2Q8NFU1 509 aa4.63□□□□□ -1.67
HMGB3P6-201ENST00000444896 NEK9Q8TD19 979 aa4.63□□□□□ -1.67
HMGB3P6-201ENST00000444896 CREB3L4Q8TEY5 395 aa4.63□□□□□ -1.67
HMGB3P6-201ENST00000444896 MMABQ96EY8 250 aaPredicted RBP4.63□□□□□ -1.67
HMGB3P6-201ENST00000444896 SLC41A2Q96JW4 573 aa4.63□□□□□ -1.67
HMGB3P6-201ENST00000444896 PPP1R13BQ96KQ4 1090 aa4.63□□□□□ -1.67
HMGB3P6-201ENST00000444896 ZNF570Q96NI8 536 aa4.63□□□□□ -1.67
HMGB3P6-201ENST00000444896 C1QTNF5Q9BXJ0 243 aa4.63□□□□□ -1.67
HMGB3P6-201ENST00000444896 ESRP2Q9H6T0 727 aaKnown RBP4.63□□□□□ -1.67
HMGB3P6-201ENST00000444896 POLR1BQ9H9Y6 1135 aa4.63□□□□□ -1.67
HMGB3P6-201ENST00000444896 BPIFA1Q9NP55 256 aa4.63□□□□□ -1.67
HMGB3P6-201ENST00000444896 CNOT8Q9UFF9 292 aaKnown RBP4.63□□□□□ -1.67
HMGB3P6-201ENST00000444896 CEPT1Q9Y6K0 416 aa4.63□□□□□ -1.67
HMGB3P6-201ENST00000444896 UTYO14607 1347 aa4.63□□□□□ -1.67
HMGB3P6-201ENST00000444896 AQRO60306 1485 aaKnown RBP eCLIP4.62□□□□□ -1.67
HMGB3P6-201ENST00000444896 URB2Q14146 1524 aaKnown RBP4.62□□□□□ -1.67
HMGB3P6-201ENST00000444896 PCF11O94913 1555 aaKnown RBP4.62□□□□□ -1.67
HMGB3P6-201ENST00000444896 KIF21AQ7Z4S6 1674 aa4.62□□□□□ -1.67
HMGB3P6-201ENST00000444896 FAM237AA0A1B0GTK4 181 aa4.62□□□□□ -1.67
HMGB3P6-201ENST00000444896 DYTNA2CJ06 578 aa4.62□□□□□ -1.67
HMGB3P6-201ENST00000444896 WNT9BO14905 357 aa4.62□□□□□ -1.67
HMGB3P6-201ENST00000444896 HSPA12AO43301 675 aa4.62□□□□□ -1.67
HMGB3P6-201ENST00000444896 RNASEH2AO75792 299 aaKnown RBP4.62□□□□□ -1.67
HMGB3P6-201ENST00000444896 MTA2O94776 668 aa4.62□□□□□ -1.67
HMGB3P6-201ENST00000444896 NDUFB4O95168 129 aa4.62□□□□□ -1.67
HMGB3P6-201ENST00000444896 HOXC6P09630 235 aa4.62□□□□□ -1.67
HMGB3P6-201ENST00000444896 AMTP48728 403 aa4.62□□□□□ -1.67
HMGB3P6-201ENST00000444896 MXI1P50539 228 aa4.62□□□□□ -1.67
HMGB3P6-201ENST00000444896 EIF5P55010 431 aaKnown RBP4.62□□□□□ -1.67
HMGB3P6-201ENST00000444896 MED22Q15528 200 aa4.62□□□□□ -1.67
HMGB3P6-201ENST00000444896 CXorf66Q5JRM2 361 aaPredicted RBP4.62□□□□□ -1.67
HMGB3P6-201ENST00000444896 PLEKHA7Q6IQ23 1121 aa4.62□□□□□ -1.67
HMGB3P6-201ENST00000444896 TTI2Q6NXR4 508 aa4.62□□□□□ -1.67
HMGB3P6-201ENST00000444896 TSSK4Q6SA08 328 aa4.62□□□□□ -1.67
HMGB3P6-201ENST00000444896 LINGO2Q7L985 606 aa4.62□□□□□ -1.67
HMGB3P6-201ENST00000444896 SHFQ7M4L6 423 aa4.62□□□□□ -1.67
HMGB3P6-201ENST00000444896 FAM110AQ9BQ89 295 aa4.62□□□□□ -1.67
HMGB3P6-201ENST00000444896 SF3B5Q9BWJ5 86 aaKnown RBP4.62□□□□□ -1.67
HMGB3P6-201ENST00000444896 MUC13Q9H3R2 512 aa4.62□□□□□ -1.67
HMGB3P6-201ENST00000444896 MRPL44Q9H9J2 332 aaKnown RBP4.62□□□□□ -1.67
HMGB3P6-201ENST00000444896 FBRSL1Q9HCM7 1045 aaKnown RBP4.62□□□□□ -1.67
HMGB3P6-201ENST00000444896 HIF1ANQ9NWT6 349 aa4.62□□□□□ -1.67
HMGB3P6-201ENST00000444896 STON1Q9Y6Q2 735 aa4.62□□□□□ -1.67
HMGB3P6-201ENST00000444896 FMN1Q68DA7 1419 aa4.62□□□□□ -1.67
HMGB3P6-201ENST00000444896 LRRC9Q6ZRR7 1453 aa4.62□□□□□ -1.67
HMGB3P6-201ENST00000444896 A0A1W2PRG0 241 aa4.61□□□□□ -1.67
HMGB3P6-201ENST00000444896 TMEM202A6NGA9 273 aa4.61□□□□□ -1.67
HMGB3P6-201ENST00000444896 TTC36A6NLP5 189 aa4.61□□□□□ -1.67
HMGB3P6-201ENST00000444896 EIF3CLB5ME19 914 aaKnown RBP4.61□□□□□ -1.67
HMGB3P6-201ENST00000444896 PTP4A3O75365 173 aa4.61□□□□□ -1.67
HMGB3P6-201ENST00000444896 MLYCDO95822 493 aa4.61□□□□□ -1.67
HMGB3P6-201ENST00000444896 ALPLP05186 524 aa4.61□□□□□ -1.67
HMGB3P6-201ENST00000444896 EIF2S1P05198 315 aaKnown RBP4.61□□□□□ -1.67
HMGB3P6-201ENST00000444896 CYC1P08574 325 aa4.61□□□□□ -1.67
HMGB3P6-201ENST00000444896 PCYT1AP49585 367 aa4.61□□□□□ -1.67
HMGB3P6-201ENST00000444896 BNC1Q01954 994 aa4.61□□□□□ -1.67
HMGB3P6-201ENST00000444896 FOXD4Q12950 439 aaPredicted RBP4.61□□□□□ -1.67
HMGB3P6-201ENST00000444896 FHL1Q13642 323 aa4.61□□□□□ -1.67
HMGB3P6-201ENST00000444896 EIF4A2Q14240 407 aaKnown RBP4.61□□□□□ -1.67
HMGB3P6-201ENST00000444896 DRAP1Q14919 205 aaPredicted RBP4.61□□□□□ -1.67
HMGB3P6-201ENST00000444896 EFNB3Q15768 340 aa4.61□□□□□ -1.67
HMGB3P6-201ENST00000444896 DPCR1Q3MIW9 517 aa4.61□□□□□ -1.67
HMGB3P6-201ENST00000444896 MMEL1Q495T6 779 aa4.61□□□□□ -1.67
HMGB3P6-201ENST00000444896 TDRD12Q587J7 1177 aaKnown RBP4.61□□□□□ -1.67
HMGB3P6-201ENST00000444896 SLC45A4Q5BKX6 768 aa4.61□□□□□ -1.67
HMGB3P6-201ENST00000444896 WDR63Q8IWG1 891 aa4.61□□□□□ -1.67
HMGB3P6-201ENST00000444896 SCCPDHQ8NBX0 429 aa4.61□□□□□ -1.67
HMGB3P6-201ENST00000444896 AGBL3Q8NEM8 1001 aa4.61□□□□□ -1.67
HMGB3P6-201ENST00000444896 USP6NLQ92738 828 aa4.61□□□□□ -1.67
HMGB3P6-201ENST00000444896 MIB2Q96AX9 1013 aa4.61□□□□□ -1.67
HMGB3P6-201ENST00000444896 FAM149B1Q96BN6 582 aa4.61□□□□□ -1.67
HMGB3P6-201ENST00000444896 OTULINQ96BN8 352 aa4.61□□□□□ -1.67
HMGB3P6-201ENST00000444896 SLC25A33Q9BSK2 321 aa4.61□□□□□ -1.67
HMGB3P6-201ENST00000444896 WDR26Q9H7D7 661 aa4.61□□□□□ -1.67
HMGB3P6-201ENST00000444896 KRT84Q9NSB2 600 aa4.61□□□□□ -1.67
HMGB3P6-201ENST00000444896 DIAPH3Q9NSV4 1193 aa4.61□□□□□ -1.67
HMGB3P6-201ENST00000444896 LIMA1Q9UHB6 759 aaKnown RBP4.61□□□□□ -1.67
HMGB3P6-201ENST00000444896 FBXO9Q9UK97 447 aaPredicted RBP4.61□□□□□ -1.67
HMGB3P6-201ENST00000444896 AGO1Q9UL18 857 aaKnown RBP4.61□□□□□ -1.67
HMGB3P6-201ENST00000444896 MYO6Q9UM54 1294 aa4.61□□□□□ -1.67
HMGB3P6-201ENST00000444896 AAR2Q9Y312 384 aaKnown RBP4.61□□□□□ -1.67
HMGB3P6-201ENST00000444896 CASKIN1Q8WXD9 1431 aa4.61□□□□□ -1.67
HMGB3P6-201ENST00000444896 GAPVD1Q14C86 1478 aa4.61□□□□□ -1.67
HMGB3P6-201ENST00000444896 THOC2Q8NI27 1593 aaKnown RBP4.61□□□□□ -1.67
HMGB3P6-201ENST00000444896 FAM90A8PA6NJQ4 464 aa4.6□□□□□ -1.67
HMGB3P6-201ENST00000444896 LIPT2A6NK58 231 aa4.6□□□□□ -1.67
HMGB3P6-201ENST00000444896 IKBKBO14920 756 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms