RNA–Protein interactions for RNA: ENST00000444878.5

RBM39-216, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-216ENST00000444878 VPS28Q9UK41 221 aa13.72□□□□□ -0.21
RBM39-216ENST00000444878 L3MBTL1Q9Y468 752 aa13.72□□□□□ -0.21
RBM39-216ENST00000444878 CPQQ9Y646 472 aa13.72□□□□□ -0.21
RBM39-216ENST00000444878 TRIM43BA6NCK2 446 aa13.71□□□□□ -0.21
RBM39-216ENST00000444878 MATN2O00339 956 aa13.71□□□□□ -0.21
RBM39-216ENST00000444878 HDAC3O15379 428 aa13.71□□□□□ -0.21
RBM39-216ENST00000444878 TMCC1O94876 653 aa13.71□□□□□ -0.21
RBM39-216ENST00000444878 RBP1P09455 135 aa13.71□□□□□ -0.21
RBM39-216ENST00000444878 GABRR2P28476 465 aa13.71□□□□□ -0.21
RBM39-216ENST00000444878 MZF1P28698 734 aaPredicted RBP13.71□□□□□ -0.21
RBM39-216ENST00000444878 HK2P52789 917 aa13.71□□□□□ -0.21
RBM39-216ENST00000444878 CDKN2DP55273 166 aa13.71□□□□□ -0.21
RBM39-216ENST00000444878 MXRA7P84157 204 aa13.71□□□□□ -0.21
RBM39-216ENST00000444878 CREMQ03060 361 aa13.71□□□□□ -0.21
RBM39-216ENST00000444878 ACAP2Q15057 778 aa13.71□□□□□ -0.21
RBM39-216ENST00000444878 SLC9B1Q4ZJI4 515 aa13.71□□□□□ -0.21
RBM39-216ENST00000444878 SEL1L3Q68CR1 1132 aa13.71□□□□□ -0.21
RBM39-216ENST00000444878 PLCD3Q8N3E9 789 aa13.71□□□□□ -0.21
RBM39-216ENST00000444878 TXNDC5Q8NBS9 432 aaKnown RBP13.71□□□□□ -0.21
RBM39-216ENST00000444878 RBM15BQ8NDT2 890 aaKnown RBP13.71□□□□□ -0.21
RBM39-216ENST00000444878 LPCAT1Q8NF37 534 aa13.71□□□□□ -0.21
RBM39-216ENST00000444878 MAPK15Q8TD08 544 aa13.71□□□□□ -0.21
RBM39-216ENST00000444878 PDCD6IPQ8WUM4 868 aaKnown RBP13.71□□□□□ -0.21
RBM39-216ENST00000444878 TRIM43Q96BQ3 446 aaPredicted RBP13.71□□□□□ -0.21
RBM39-216ENST00000444878 CCDC126Q96EE4 140 aa13.71□□□□□ -0.21
RBM39-216ENST00000444878 UBXN10Q96LJ8 280 aa13.71□□□□□ -0.21
RBM39-216ENST00000444878 POMKQ9H5K3 350 aa13.71□□□□□ -0.21
RBM39-216ENST00000444878 DENND2DQ9H6A0 471 aaPredicted RBP13.71□□□□□ -0.21
RBM39-216ENST00000444878 NLE1Q9NVX2 485 aaPredicted RBP13.71□□□□□ -0.21
RBM39-216ENST00000444878 CORO1CQ9ULV4 474 aaPredicted RBP13.71□□□□□ -0.21
RBM39-216ENST00000444878 PCDHGC4Q9Y5F7 938 aa13.71□□□□□ -0.21
RBM39-216ENST00000444878 SPO11Q9Y5K1 396 aa13.71□□□□□ -0.21
RBM39-216ENST00000444878 RAI2Q9Y5P3 530 aa13.71□□□□□ -0.21
RBM39-216ENST00000444878 C2orf81A6NN90 581 aa13.7□□□□□ -0.22
RBM39-216ENST00000444878 FGF18O76093 207 aa13.7□□□□□ -0.22
RBM39-216ENST00000444878 LUC7L3O95232 432 aaKnown RBP13.7□□□□□ -0.22
RBM39-216ENST00000444878 OLFM2O95897 454 aa13.7□□□□□ -0.22
RBM39-216ENST00000444878 PRLP01236 227 aa13.7□□□□□ -0.22
RBM39-216ENST00000444878 SLC4A1P02730 911 aa13.7□□□□□ -0.22
RBM39-216ENST00000444878 PDHA1P08559 390 aa13.7□□□□□ -0.22
RBM39-216ENST00000444878 HOXB8P17481 243 aaPredicted RBP13.7□□□□□ -0.22
RBM39-216ENST00000444878 TFEBP19484 476 aa13.7□□□□□ -0.22
RBM39-216ENST00000444878 OGNP20774 298 aaKnown RBP13.7□□□□□ -0.22
RBM39-216ENST00000444878 PGM1P36871 562 aa13.7□□□□□ -0.22
RBM39-216ENST00000444878 ZXDBP98169 803 aa13.7□□□□□ -0.22
RBM39-216ENST00000444878 CDH18Q13634 790 aa13.7□□□□□ -0.22
RBM39-216ENST00000444878 TAF1AQ15573 450 aaPredicted RBP13.7□□□□□ -0.22
RBM39-216ENST00000444878 OTOP2Q7RTS6 562 aa13.7□□□□□ -0.22
RBM39-216ENST00000444878 PIWIL4Q7Z3Z4 852 aaKnown RBP13.7□□□□□ -0.22
RBM39-216ENST00000444878 GPR65Q8IYL9 337 aa13.7□□□□□ -0.22
RBM39-216ENST00000444878 TMEM199Q8N511 208 aa13.7□□□□□ -0.22
RBM39-216ENST00000444878 ADAMTS19Q8TE59 1207 aa13.7□□□□□ -0.22
RBM39-216ENST00000444878 ANKRD49Q8WVL7 239 aa13.7□□□□□ -0.22
RBM39-216ENST00000444878 MRPS31Q92665 395 aaKnown RBP13.7□□□□□ -0.22
RBM39-216ENST00000444878 FEM1AQ9BSK4 669 aa13.7□□□□□ -0.22
RBM39-216ENST00000444878 ADGRE3Q9BY15 652 aa13.7□□□□□ -0.22
RBM39-216ENST00000444878 SHCBP1LQ9BZQ2 653 aa13.7□□□□□ -0.22
RBM39-216ENST00000444878 MMADHCQ9H3L0 296 aaPredicted RBP13.7□□□□□ -0.22
RBM39-216ENST00000444878 TCF7L2Q9NQB0 619 aa13.7□□□□□ -0.22
RBM39-216ENST00000444878 PCDH10Q9P2E7 1040 aa13.7□□□□□ -0.22
RBM39-216ENST00000444878 ZDHHC2Q9UIJ5 367 aa13.7□□□□□ -0.22
RBM39-216ENST00000444878 LSM7Q9UK45 103 aaKnown RBP13.7□□□□□ -0.22
RBM39-216ENST00000444878 ASB3Q9Y575 518 aa13.7□□□□□ -0.22
RBM39-216ENST00000444878 MYOFQ9NZM1 2061 aa13.7□□□□□ -0.22
RBM39-216ENST00000444878 NEMP2A6NFY4 417 aa13.7□□□□□ -0.22
RBM39-216ENST00000444878 E9PBE3 544 aa13.7□□□□□ -0.22
RBM39-216ENST00000444878 SLCO1B7G3V0H7 640 aa13.7□□□□□ -0.22
RBM39-216ENST00000444878 TGM5O43548 720 aa13.7□□□□□ -0.22
RBM39-216ENST00000444878 NPHS1O60500 1241 aa13.7□□□□□ -0.22
RBM39-216ENST00000444878 KLHL41O60662 606 aa13.7□□□□□ -0.22
RBM39-216ENST00000444878 LILRB3O75022 631 aa13.7□□□□□ -0.22
RBM39-216ENST00000444878 CD160O95971 181 aa13.7□□□□□ -0.22
RBM39-216ENST00000444878 LRG1P02750 347 aa13.7□□□□□ -0.22
RBM39-216ENST00000444878 CKMP06732 381 aa13.7□□□□□ -0.22
RBM39-216ENST00000444878 CNPP09543 421 aaKnown RBP13.7□□□□□ -0.22
RBM39-216ENST00000444878 EZRP15311 586 aaKnown RBP13.7□□□□□ -0.22
RBM39-216ENST00000444878 SLC26A3P40879 764 aa13.7□□□□□ -0.22
RBM39-216ENST00000444878 GJA8P48165 433 aa13.7□□□□□ -0.22
RBM39-216ENST00000444878 ZNF140P52738 457 aaPredicted RBP13.7□□□□□ -0.22
RBM39-216ENST00000444878 DNAJB13P59910 316 aa13.7□□□□□ -0.22
RBM39-216ENST00000444878 SEMA3AQ14563 771 aa13.7□□□□□ -0.22
RBM39-216ENST00000444878 DNAL1Q4LDG9 190 aa13.7□□□□□ -0.22
RBM39-216ENST00000444878 INO80DQ53TQ3 878 aaPredicted RBP13.7□□□□□ -0.22
RBM39-216ENST00000444878 GPR158Q5T848 1215 aa13.7□□□□□ -0.22
RBM39-216ENST00000444878 TRIM67Q6ZTA4 783 aa13.7□□□□□ -0.22
RBM39-216ENST00000444878 SPNS2Q8IVW8 549 aa13.7□□□□□ -0.22
RBM39-216ENST00000444878 LSMEM2Q8N112 164 aa13.7□□□□□ -0.22
RBM39-216ENST00000444878 MDGA1Q8NFP4 955 aa13.7□□□□□ -0.22
RBM39-216ENST00000444878 OR4K2Q8NGD2 314 aa13.7□□□□□ -0.22
RBM39-216ENST00000444878 FBXO27Q8NI29 283 aa13.7□□□□□ -0.22
RBM39-216ENST00000444878 BHMTQ93088 406 aa13.7□□□□□ -0.22
RBM39-216ENST00000444878 VTI1BQ9UEU0 232 aa13.7□□□□□ -0.22
RBM39-216ENST00000444878 ANKRD66B4E2M5 251 aa13.69□□□□□ -0.22
RBM39-216ENST00000444878 ZMPSTE24O75844 475 aa13.69□□□□□ -0.22
RBM39-216ENST00000444878 CTSAP10619 480 aa13.69□□□□□ -0.22
RBM39-216ENST00000444878 STC1P52823 247 aa13.69□□□□□ -0.22
RBM39-216ENST00000444878 CYP4F8P98187 520 aa13.69□□□□□ -0.22
RBM39-216ENST00000444878 PFKPQ01813 784 aa13.69□□□□□ -0.22
RBM39-216ENST00000444878 METTL21CQ5VZV1 264 aa13.69□□□□□ -0.22
RBM39-216ENST00000444878 ICE2Q659A1 982 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms