RNA–Protein interactions for RNA: ENST00000444867.1

SEMA3D-202, Transcript of semaphorin 3D, humanhuman

TSL 1 (best) BASIC

Gene SEMA3D, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-202ENST00000444867 CLCN4P51793 760 aa18.91■□□□□ 0.62
SEMA3D-202ENST00000444867 ELF3P78545 371 aaPredicted RBP18.91■□□□□ 0.62
SEMA3D-202ENST00000444867 TRAF2Q12933 501 aa18.91■□□□□ 0.62
SEMA3D-202ENST00000444867 DLG1Q12959 904 aa18.91■□□□□ 0.62
SEMA3D-202ENST00000444867 ZNF460Q14592 562 aa18.91■□□□□ 0.62
SEMA3D-202ENST00000444867 HSF5Q4G112 596 aaPredicted RBP18.91■□□□□ 0.62
SEMA3D-202ENST00000444867 PLPP4Q5VZY2 271 aa18.91■□□□□ 0.62
SEMA3D-202ENST00000444867 FIBINQ8TAL6 211 aa18.91■□□□□ 0.62
SEMA3D-202ENST00000444867 WFDC5Q8TCV5 224 aa18.91■□□□□ 0.62
SEMA3D-202ENST00000444867 TCF12Q99081 682 aa18.91■□□□□ 0.62
SEMA3D-202ENST00000444867 NDNQ99608 321 aa18.91■□□□□ 0.62
SEMA3D-202ENST00000444867 GATA5Q9BWX5 397 aaPredicted RBP18.91■□□□□ 0.62
SEMA3D-202ENST00000444867 SLC46A2Q9BY10 475 aa18.91■□□□□ 0.62
SEMA3D-202ENST00000444867 DRC3Q9H069 523 aa18.91■□□□□ 0.62
SEMA3D-202ENST00000444867 GPAMQ9HCL2 828 aa18.91■□□□□ 0.62
SEMA3D-202ENST00000444867 IGSF5Q9NSI5 407 aa18.91■□□□□ 0.62
SEMA3D-202ENST00000444867 KLC4Q9NSK0 619 aa18.91■□□□□ 0.62
SEMA3D-202ENST00000444867 XPR1Q9UBH6 696 aa18.91■□□□□ 0.62
SEMA3D-202ENST00000444867 HAO1Q9UJM8 370 aa18.91■□□□□ 0.62
SEMA3D-202ENST00000444867 PCDHGC4Q9Y5F7 938 aa18.91■□□□□ 0.62
SEMA3D-202ENST00000444867 NUMBLQ9Y6R0 609 aa18.91■□□□□ 0.62
SEMA3D-202ENST00000444867 OR51F1A6NGY5 319 aa18.9■□□□□ 0.62
SEMA3D-202ENST00000444867 CCL22O00626 93 aa18.9■□□□□ 0.62
SEMA3D-202ENST00000444867 WISP3O95389 354 aaPredicted RBP18.9■□□□□ 0.62
SEMA3D-202ENST00000444867 RBP1P09455 135 aa18.9■□□□□ 0.62
SEMA3D-202ENST00000444867 PIRTP0C851 137 aa18.9■□□□□ 0.62
SEMA3D-202ENST00000444867 GLRBP48167 497 aa18.9■□□□□ 0.62
SEMA3D-202ENST00000444867 PLK1P53350 603 aa18.9■□□□□ 0.62
SEMA3D-202ENST00000444867 KCNJ2P63252 427 aa18.9■□□□□ 0.62
SEMA3D-202ENST00000444867 SLC20A2Q08357 652 aa18.9■□□□□ 0.62
SEMA3D-202ENST00000444867 NAPRTQ6XQN6 538 aa18.9■□□□□ 0.62
SEMA3D-202ENST00000444867 PACS2Q86VP3 889 aa18.9■□□□□ 0.62
SEMA3D-202ENST00000444867 RNF135Q8IUD6 432 aa18.9■□□□□ 0.62
SEMA3D-202ENST00000444867 LEMD2Q8NC56 503 aa18.9■□□□□ 0.62
SEMA3D-202ENST00000444867 SPPL3Q8TCT6 385 aa18.9■□□□□ 0.62
SEMA3D-202ENST00000444867 PDCD6IPQ8WUM4 868 aaKnown RBP18.9■□□□□ 0.62
SEMA3D-202ENST00000444867 HEXDCQ8WVB3 486 aa18.9■□□□□ 0.62
SEMA3D-202ENST00000444867 CCDC126Q96EE4 140 aa18.9■□□□□ 0.62
SEMA3D-202ENST00000444867 NSL1Q96IY1 281 aa18.9■□□□□ 0.62
SEMA3D-202ENST00000444867 SUDS3Q9H7L9 328 aaPredicted RBP18.9■□□□□ 0.62
SEMA3D-202ENST00000444867 TLR9Q9NR96 1032 aa18.9■□□□□ 0.62
SEMA3D-202ENST00000444867 VPS9D1Q9Y2B5 631 aa18.9■□□□□ 0.62
SEMA3D-202ENST00000444867 GBF1Q92538 1859 aa18.9■□□□□ 0.62
SEMA3D-202ENST00000444867 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.89■□□□□ 0.62
SEMA3D-202ENST00000444867 HIDE1A8MVS5 230 aa18.89■□□□□ 0.62
SEMA3D-202ENST00000444867 MGRN1O60291 552 aa18.89■□□□□ 0.62
SEMA3D-202ENST00000444867 FZD6O60353 706 aa18.89■□□□□ 0.62
SEMA3D-202ENST00000444867 SERPINA6P08185 405 aa18.89■□□□□ 0.62
SEMA3D-202ENST00000444867 PDHA1P08559 390 aa18.89■□□□□ 0.62
SEMA3D-202ENST00000444867 PTPN2P17706 415 aa18.89■□□□□ 0.62
SEMA3D-202ENST00000444867 PTPN4P29074 926 aa18.89■□□□□ 0.62
SEMA3D-202ENST00000444867 HOXA9P31269 272 aa18.89■□□□□ 0.62
SEMA3D-202ENST00000444867 ARRB2P32121 409 aa18.89■□□□□ 0.62
SEMA3D-202ENST00000444867 SERPINB5P36952 375 aa18.89■□□□□ 0.62
SEMA3D-202ENST00000444867 STC1P52823 247 aa18.89■□□□□ 0.62
SEMA3D-202ENST00000444867 DNAJB13P59910 316 aa18.89■□□□□ 0.62
SEMA3D-202ENST00000444867 RCN2Q14257 317 aa18.89■□□□□ 0.62
SEMA3D-202ENST00000444867 ACAP2Q15057 778 aa18.89■□□□□ 0.62
SEMA3D-202ENST00000444867 ARHGAP15Q53QZ3 475 aa18.89■□□□□ 0.62
SEMA3D-202ENST00000444867 TECRLQ5HYJ1 363 aa18.89■□□□□ 0.62
SEMA3D-202ENST00000444867 ALYREFQ86V81 257 aaKnown RBP18.89■□□□□ 0.62
SEMA3D-202ENST00000444867 MDGA1Q8NFP4 955 aa18.89■□□□□ 0.62
SEMA3D-202ENST00000444867 SLC22A17Q8WUG5 538 aa18.89■□□□□ 0.62
SEMA3D-202ENST00000444867 POF1BQ8WVV4 589 aa18.89■□□□□ 0.62
SEMA3D-202ENST00000444867 SLC7A6OSQ96CW6 309 aaPredicted RBP18.89■□□□□ 0.62
SEMA3D-202ENST00000444867 PTCD3Q96EY7 689 aaKnown RBP18.89■□□□□ 0.62
SEMA3D-202ENST00000444867 UBXN10Q96LJ8 280 aa18.89■□□□□ 0.62
SEMA3D-202ENST00000444867 RILPQ96NA2 401 aa18.89■□□□□ 0.62
SEMA3D-202ENST00000444867 CDH19Q9H159 772 aa18.89■□□□□ 0.62
SEMA3D-202ENST00000444867 PNPOQ9NVS9 261 aa18.89■□□□□ 0.62
SEMA3D-202ENST00000444867 APOBEC2Q9Y235 224 aaKnown RBP18.89■□□□□ 0.62
SEMA3D-202ENST00000444867 RAP2CQ9Y3L5 183 aa18.89■□□□□ 0.62
SEMA3D-202ENST00000444867 PFDN6O15212 129 aa18.89■□□□□ 0.61
SEMA3D-202ENST00000444867 BUD23O43709 281 aaKnown RBP18.89■□□□□ 0.61
SEMA3D-202ENST00000444867 CBX6O95503 412 aa18.89■□□□□ 0.61
SEMA3D-202ENST00000444867 FDXRP22570 491 aa18.89■□□□□ 0.61
SEMA3D-202ENST00000444867 CALB2P22676 271 aa18.89■□□□□ 0.61
SEMA3D-202ENST00000444867 ATP5F1P24539 256 aaPredicted RBP18.89■□□□□ 0.61
SEMA3D-202ENST00000444867 GRIA4P48058 902 aa18.89■□□□□ 0.61
SEMA3D-202ENST00000444867 SUOXP51687 545 aa18.89■□□□□ 0.61
SEMA3D-202ENST00000444867 RPL26P61254 145 aaKnown RBP18.89■□□□□ 0.61
SEMA3D-202ENST00000444867 CSHL1Q14406 222 aa18.89■□□□□ 0.61
SEMA3D-202ENST00000444867 PTPRCAPQ14761 206 aa18.89■□□□□ 0.61
SEMA3D-202ENST00000444867 GPR158Q5T848 1215 aa18.89■□□□□ 0.61
SEMA3D-202ENST00000444867 LDB1Q86U70 411 aaPredicted RBP18.89■□□□□ 0.61
SEMA3D-202ENST00000444867 APCDD1Q8J025 514 aa18.89■□□□□ 0.61
SEMA3D-202ENST00000444867 OR4K2Q8NGD2 314 aa18.89■□□□□ 0.61
SEMA3D-202ENST00000444867 SHKBP1Q8TBC3 707 aa18.89■□□□□ 0.61
SEMA3D-202ENST00000444867 STON2Q8WXE9 905 aa18.89■□□□□ 0.61
SEMA3D-202ENST00000444867 C19orf43Q9BQ61 176 aa18.89■□□□□ 0.61
SEMA3D-202ENST00000444867 NMUR2Q9GZQ4 415 aa18.89■□□□□ 0.61
SEMA3D-202ENST00000444867 ILKAPQ9H0C8 392 aaPredicted RBP18.89■□□□□ 0.61
SEMA3D-202ENST00000444867 MTIF3Q9H2K0 278 aaKnown RBP18.89■□□□□ 0.61
SEMA3D-202ENST00000444867 PCDH10Q9P2E7 1040 aa18.89■□□□□ 0.61
SEMA3D-202ENST00000444867 RPL26L1Q9UNX3 145 aaKnown RBP18.89■□□□□ 0.61
SEMA3D-202ENST00000444867 TRIM33Q9UPN9 1127 aa18.89■□□□□ 0.61
SEMA3D-202ENST00000444867 FCF1Q9Y324 198 aaKnown RBP18.89■□□□□ 0.61
SEMA3D-202ENST00000444867 LCHNA4D1U4 455 aa18.88■□□□□ 0.61
SEMA3D-202ENST00000444867 H7C0S8 307 aa18.88■□□□□ 0.61
SEMA3D-202ENST00000444867 DLX3O60479 287 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms