RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 YAF2Q8IY57 180 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 OR4K2Q8NGD2 314 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 OR52K2Q8NGK3 314 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 UCMAQ8WVF2 138 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 PPM1EQ8WY54 764 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 TCEAL4Q96EI5 215 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 ZNF778Q96MU6 729 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 TM6SF2Q9BZW4 377 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 GPAMQ9HCL2 828 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 OBP2AQ9NY56 170 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 EVLQ9UI08 416 aaPredicted RBP6.04□□□□□ -1.44
VPS50-205ENST00000441602 GGT7Q9UJ14 662 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 PCDHB9Q9Y5E1 797 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 PCDHGC4Q9Y5F7 938 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 GOLGA8QA0A0J9YX86 632 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 GOLGA8OA6NCC3 632 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 GOLGA8NF8WBI6 632 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 PHGDHO43175 533 aaKnown RBP6.04□□□□□ -1.44
VPS50-205ENST00000441602 SRP72O76094 671 aaKnown RBP6.04□□□□□ -1.44
VPS50-205ENST00000441602 HAUS5O94927 633 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 FSHRP23945 695 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 ATP5F1P24539 256 aaPredicted RBP6.04□□□□□ -1.44
VPS50-205ENST00000441602 IRS1P35568 1242 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 ABL2P42684 1182 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 RGRP47804 291 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 ZNF140P52738 457 aaPredicted RBP6.04□□□□□ -1.44
VPS50-205ENST00000441602 TAS2R39P59534 338 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 CACNG1Q06432 222 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 TBCCQ15814 346 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 FSCBQ5H9T9 825 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 PRSS36Q5K4E3 855 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 PPP2R2DQ66LE6 453 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 LRRC8EQ6NSJ5 796 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 CDHR3Q6ZTQ4 885 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 TAS2R42Q7RTR8 314 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 RNF135Q8IUD6 432 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 ARID3BQ8IVW6 561 aaPredicted RBP6.04□□□□□ -1.44
VPS50-205ENST00000441602 HOMEZQ8IX15 550 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 PLPP6Q8IY26 295 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 APCDD1Q8J025 514 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.04□□□□□ -1.44
VPS50-205ENST00000441602 ALG14Q96F25 216 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 ASIC4Q96FT7 647 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 ZNF419Q96HQ0 510 aaPredicted RBP6.04□□□□□ -1.44
VPS50-205ENST00000441602 ZNF641Q96N77 438 aaPredicted RBP6.04□□□□□ -1.44
VPS50-205ENST00000441602 SLC28A3Q9HAS3 691 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 DUS2Q9NX74 493 aaKnown RBP6.04□□□□□ -1.44
VPS50-205ENST00000441602 TAS2R13Q9NYV9 303 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 PLK2Q9NYY3 685 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 TMEM216Q9P0N5 145 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.04□□□□□ -1.44
VPS50-205ENST00000441602 PCDHB1Q9Y5F3 818 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 HCFC2Q9Y5Z7 792 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 NYNRINQ9P2P1 1898 aaKnown RBP6.04□□□□□ -1.44
VPS50-205ENST00000441602 A0A0G2JND7 137 aa6.03□□□□□ -1.44
VPS50-205ENST00000441602 TTC24A2A3L6 582 aaPredicted RBP6.03□□□□□ -1.44
VPS50-205ENST00000441602 TRAFD1O14545 582 aaPredicted RBP6.03□□□□□ -1.44
VPS50-205ENST00000441602 TYRP14679 529 aa6.03□□□□□ -1.44
VPS50-205ENST00000441602 CEBPBP17676 345 aa6.03□□□□□ -1.44
VPS50-205ENST00000441602 ABCG1P45844 678 aa6.03□□□□□ -1.44
VPS50-205ENST00000441602 SLC1A6P48664 564 aa6.03□□□□□ -1.44
VPS50-205ENST00000441602 ABCE1P61221 599 aaKnown RBP6.03□□□□□ -1.44
VPS50-205ENST00000441602 ATP6V0D1P61421 351 aa6.03□□□□□ -1.44
VPS50-205ENST00000441602 ECT2LQ008S8 904 aa6.03□□□□□ -1.44
VPS50-205ENST00000441602 MYLK3Q32MK0 819 aa6.03□□□□□ -1.44
VPS50-205ENST00000441602 PPM1JQ5JR12 505 aa6.03□□□□□ -1.44
VPS50-205ENST00000441602 ATXN7L2Q5T6C5 722 aaPredicted RBP6.03□□□□□ -1.44
VPS50-205ENST00000441602 ZNF697Q5TEC3 545 aa6.03□□□□□ -1.44
VPS50-205ENST00000441602 LIPMQ5VYY2 423 aa6.03□□□□□ -1.44
VPS50-205ENST00000441602 MBLAC2Q68D91 279 aa6.03□□□□□ -1.44
VPS50-205ENST00000441602 CLEC14AQ86T13 490 aa6.03□□□□□ -1.44
VPS50-205ENST00000441602 NKAPQ8N5F7 415 aaKnown RBP6.03□□□□□ -1.44
VPS50-205ENST00000441602 OR13J1Q8NGT2 312 aa6.03□□□□□ -1.44
VPS50-205ENST00000441602 BPIFB1Q8TDL5 484 aa6.03□□□□□ -1.44
VPS50-205ENST00000441602 KCTD4Q8WVF5 259 aa6.03□□□□□ -1.44
VPS50-205ENST00000441602 FAR2Q96K12 515 aa6.03□□□□□ -1.44
VPS50-205ENST00000441602 CAB39LQ9H9S4 337 aa6.03□□□□□ -1.44
VPS50-205ENST00000441602 EML4Q9HC35 981 aaKnown RBP6.03□□□□□ -1.44
VPS50-205ENST00000441602 SLCO1B3Q9NPD5 702 aa6.03□□□□□ -1.44
VPS50-205ENST00000441602 TRMT6Q9UJA5 497 aaKnown RBP6.03□□□□□ -1.44
VPS50-205ENST00000441602 ZFP69BQ9UJL9 534 aa6.03□□□□□ -1.44
VPS50-205ENST00000441602 HS3ST2Q9Y278 367 aa6.03□□□□□ -1.44
VPS50-205ENST00000441602 ARL5AQ9Y689 179 aa6.03□□□□□ -1.44
VPS50-205ENST00000441602 S1PR4O95977 384 aa6.03□□□□□ -1.44
VPS50-205ENST00000441602 SRPRAP08240 638 aaKnown RBP6.03□□□□□ -1.44
VPS50-205ENST00000441602 PIRTP0C851 137 aa6.03□□□□□ -1.44
VPS50-205ENST00000441602 ADH5P11766 374 aa6.03□□□□□ -1.44
VPS50-205ENST00000441602 ZNF7P17097 686 aaPredicted RBP6.03□□□□□ -1.44
VPS50-205ENST00000441602 PSMA3P25788 255 aa6.03□□□□□ -1.44
VPS50-205ENST00000441602 ARNTP27540 789 aa6.03□□□□□ -1.44
VPS50-205ENST00000441602 MC4RP32245 332 aa6.03□□□□□ -1.44
VPS50-205ENST00000441602 CD70P32970 193 aa6.03□□□□□ -1.44
VPS50-205ENST00000441602 SKIV2L2P42285 1042 aaKnown RBP6.03□□□□□ -1.44
VPS50-205ENST00000441602 NRIP1P48552 1158 aa6.03□□□□□ -1.44
VPS50-205ENST00000441602 STC1P52823 247 aa6.03□□□□□ -1.44
VPS50-205ENST00000441602 PRKAA1Q13131 559 aa6.03□□□□□ -1.44
VPS50-205ENST00000441602 ARHGEF7Q14155 803 aa6.03□□□□□ -1.44
VPS50-205ENST00000441602 TYSND1Q2T9J0 566 aa6.03□□□□□ -1.44
VPS50-205ENST00000441602 LY6G5CQ5SRR4 150 aa6.03□□□□□ -1.44
VPS50-205ENST00000441602 CNSTQ6PJW8 725 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms