RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 RPL10LQ96L21 214 aaKnown RBP16.85■□□□□ 0.29
PMS1-213ENST00000441310 C17orf80Q9BSJ5 609 aa16.85■□□□□ 0.29
PMS1-213ENST00000441310 FUNDC2Q9BWH2 189 aa16.85■□□□□ 0.29
PMS1-213ENST00000441310 ACE2Q9BYF1 805 aaPredicted RBP16.85■□□□□ 0.29
PMS1-213ENST00000441310 RRAGCQ9HB90 399 aa16.85■□□□□ 0.29
PMS1-213ENST00000441310 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.85■□□□□ 0.29
PMS1-213ENST00000441310 AP3B1O00203 1094 aa16.85■□□□□ 0.29
PMS1-213ENST00000441310 PRPSAP2O60256 369 aa16.85■□□□□ 0.29
PMS1-213ENST00000441310 C2P06681 752 aa16.85■□□□□ 0.29
PMS1-213ENST00000441310 PIGFQ07326 219 aa16.85■□□□□ 0.29
PMS1-213ENST00000441310 FASTKQ14296 549 aaKnown RBP16.85■□□□□ 0.29
PMS1-213ENST00000441310 CCL14Q16627 93 aa16.85■□□□□ 0.29
PMS1-213ENST00000441310 LRIT3Q3SXY7 679 aa16.85■□□□□ 0.29
PMS1-213ENST00000441310 CYBRD1Q53TN4 286 aa16.85■□□□□ 0.29
PMS1-213ENST00000441310 SAMD4BQ5PRF9 694 aaKnown RBP16.85■□□□□ 0.29
PMS1-213ENST00000441310 XYLT1Q86Y38 959 aa16.85■□□□□ 0.29
PMS1-213ENST00000441310 COLGALT2Q8IYK4 626 aa16.85■□□□□ 0.29
PMS1-213ENST00000441310 LINC01465Q8N7H1 131 aa16.85■□□□□ 0.29
PMS1-213ENST00000441310 ING2Q9H160 280 aa16.85■□□□□ 0.29
PMS1-213ENST00000441310 ARMC1Q9NVT9 282 aa16.85■□□□□ 0.29
PMS1-213ENST00000441310 ASNSD1Q9NWL6 643 aa16.85■□□□□ 0.29
PMS1-213ENST00000441310 SMPD3Q9NY59 655 aaPredicted RBP16.85■□□□□ 0.29
PMS1-213ENST00000441310 CD300AQ9UGN4 299 aa16.85■□□□□ 0.29
PMS1-213ENST00000441310 BCLAF3A2AJT9 711 aaKnown RBP16.84■□□□□ 0.29
PMS1-213ENST00000441310 NUAK1O60285 661 aa16.84■□□□□ 0.29
PMS1-213ENST00000441310 CILPO75339 1184 aa16.84■□□□□ 0.29
PMS1-213ENST00000441310 TPSB2P20231 275 aa16.84■□□□□ 0.29
PMS1-213ENST00000441310 IL10P22301 178 aa16.84■□□□□ 0.29
PMS1-213ENST00000441310 ALDH4A1P30038 563 aa16.84■□□□□ 0.29
PMS1-213ENST00000441310 LRPAP1P30533 357 aa16.84■□□□□ 0.29
PMS1-213ENST00000441310 CLK3P49761 638 aaKnown RBP16.84■□□□□ 0.29
PMS1-213ENST00000441310 LSM3P62310 102 aaKnown RBP16.84■□□□□ 0.29
PMS1-213ENST00000441310 TPSAB1Q15661 275 aa16.84■□□□□ 0.29
PMS1-213ENST00000441310 BROXQ5VW32 411 aa16.84■□□□□ 0.29
PMS1-213ENST00000441310 STEAP4Q687X5 459 aa16.84■□□□□ 0.29
PMS1-213ENST00000441310 XAF1Q6GPH4 301 aa16.84■□□□□ 0.29
PMS1-213ENST00000441310 FSTL4Q6MZW2 842 aa16.84■□□□□ 0.29
PMS1-213ENST00000441310 ACOT1Q86TX2 421 aa16.84■□□□□ 0.29
PMS1-213ENST00000441310 C11orf74Q86VG3 221 aa16.84■□□□□ 0.29
PMS1-213ENST00000441310 SFRP1Q8N474 314 aa16.84■□□□□ 0.29
PMS1-213ENST00000441310 ACVR1CQ8NER5 493 aa16.84■□□□□ 0.29
PMS1-213ENST00000441310 PCDH19Q8TAB3 1148 aa16.84■□□□□ 0.29
PMS1-213ENST00000441310 DUS3LQ96G46 650 aaKnown RBP16.84■□□□□ 0.29
PMS1-213ENST00000441310 BCO2Q9BYV7 579 aa16.84■□□□□ 0.29
PMS1-213ENST00000441310 CEP41Q9BYV8 373 aa16.84■□□□□ 0.29
PMS1-213ENST00000441310 ABHD16BQ9H3Z7 469 aa16.84■□□□□ 0.29
PMS1-213ENST00000441310 NEK6Q9HC98 313 aa16.84■□□□□ 0.29
PMS1-213ENST00000441310 CD320Q9NPF0 282 aa16.84■□□□□ 0.29
PMS1-213ENST00000441310 SYBUQ9NX95 663 aa16.84■□□□□ 0.29
PMS1-213ENST00000441310 ZBBXA8MT70 800 aa16.84■□□□□ 0.29
PMS1-213ENST00000441310 TAF4O00268 1085 aa16.84■□□□□ 0.29
PMS1-213ENST00000441310 SNPHO15079 494 aa16.84■□□□□ 0.29
PMS1-213ENST00000441310 ASNA1O43681 348 aa16.84■□□□□ 0.29
PMS1-213ENST00000441310 CYP2B6P20813 491 aa16.84■□□□□ 0.29
PMS1-213ENST00000441310 CXCR2P25025 360 aa16.84■□□□□ 0.29
PMS1-213ENST00000441310 PHC1P78364 1004 aa16.84■□□□□ 0.29
PMS1-213ENST00000441310 CBLBQ13191 982 aa16.84■□□□□ 0.29
PMS1-213ENST00000441310 ATP6AP1Q15904 470 aa16.84■□□□□ 0.29
PMS1-213ENST00000441310 CCDC58Q4VC31 144 aa16.84■□□□□ 0.29
PMS1-213ENST00000441310 OR6B2Q6IFH4 312 aa16.84■□□□□ 0.29
PMS1-213ENST00000441310 C7orf31Q8N865 590 aa16.84■□□□□ 0.29
PMS1-213ENST00000441310 OR9I1Q8NGQ6 314 aa16.84■□□□□ 0.29
PMS1-213ENST00000441310 CNDP2Q96KP4 475 aaKnown RBP16.84■□□□□ 0.29
PMS1-213ENST00000441310 AGAP2Q99490 1192 aa16.84■□□□□ 0.29
PMS1-213ENST00000441310 CCM2LQ9NUG4 571 aaPredicted RBP16.84■□□□□ 0.29
PMS1-213ENST00000441310 MOSPD1Q9UJG1 213 aa16.84■□□□□ 0.29
PMS1-213ENST00000441310 SCN1AP35498 2009 aa16.84■□□□□ 0.29
PMS1-213ENST00000441310 MT-CO1P00395 513 aa16.83■□□□□ 0.29
PMS1-213ENST00000441310 CYP3A5P20815 502 aa16.83■□□□□ 0.29
PMS1-213ENST00000441310 OXTRP30559 389 aa16.83■□□□□ 0.29
PMS1-213ENST00000441310 LEPRP48357 1165 aaKnown RBP16.83■□□□□ 0.29
PMS1-213ENST00000441310 GBE1Q04446 702 aa16.83■□□□□ 0.29
PMS1-213ENST00000441310 SPRYD7Q5W111 196 aa16.83■□□□□ 0.29
PMS1-213ENST00000441310 GTF2IRD2BQ6EKJ0 949 aa16.83■□□□□ 0.29
PMS1-213ENST00000441310 KIAA0408Q6ZU52 694 aa16.83■□□□□ 0.29
PMS1-213ENST00000441310 GTF2IRD2Q86UP8 949 aa16.83■□□□□ 0.29
PMS1-213ENST00000441310 HEATR4Q86WZ0 1026 aa16.83■□□□□ 0.29
PMS1-213ENST00000441310 NETO2Q8NC67 525 aa16.83■□□□□ 0.29
PMS1-213ENST00000441310 HMGCLL1Q8TB92 370 aa16.83■□□□□ 0.29
PMS1-213ENST00000441310 DNAJB3Q8WWF6 145 aa16.83■□□□□ 0.29
PMS1-213ENST00000441310 SH3GL1Q99961 368 aa16.83■□□□□ 0.29
PMS1-213ENST00000441310 NXF3Q9H4D5 531 aaKnown RBP16.83■□□□□ 0.29
PMS1-213ENST00000441310 EPS8L2Q9H6S3 715 aa16.83■□□□□ 0.29
PMS1-213ENST00000441310 AGPAT4Q9NRZ5 378 aa16.83■□□□□ 0.29
PMS1-213ENST00000441310 GTSE1Q9NYZ3 720 aa16.83■□□□□ 0.29
PMS1-213ENST00000441310 PCDHGA11Q9Y5H2 935 aa16.83■□□□□ 0.29
PMS1-213ENST00000441310 MED7O43513 233 aa16.83■□□□□ 0.28
PMS1-213ENST00000441310 BMP4P12644 408 aa16.83■□□□□ 0.28
PMS1-213ENST00000441310 MAGP20916 626 aa16.83■□□□□ 0.28
PMS1-213ENST00000441310 IL4RP24394 825 aa16.83■□□□□ 0.28
PMS1-213ENST00000441310 PSMD8P48556 350 aa16.83■□□□□ 0.28
PMS1-213ENST00000441310 MPP1Q00013 466 aa16.83■□□□□ 0.28
PMS1-213ENST00000441310 CA9Q16790 459 aa16.83■□□□□ 0.28
PMS1-213ENST00000441310 GALNT13Q8IUC8 556 aa16.83■□□□□ 0.28
PMS1-213ENST00000441310 TTC30BQ8N4P2 665 aa16.83■□□□□ 0.28
PMS1-213ENST00000441310 C2orf69Q8N8R5 385 aa16.83■□□□□ 0.28
PMS1-213ENST00000441310 HDAC10Q969S8 669 aa16.83■□□□□ 0.28
PMS1-213ENST00000441310 MUS81Q96NY9 551 aa16.83■□□□□ 0.28
PMS1-213ENST00000441310 ITM2BQ9Y287 266 aa16.83■□□□□ 0.28
PMS1-213ENST00000441310 DEAF1O75398 565 aaPredicted RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms