RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 ERVK-11Q9UQG0 969 aa5□□□□□ -1.61
PFDN4-202ENST00000441080 STON1Q9Y6Q2 735 aa5□□□□□ -1.61
PFDN4-202ENST00000441080 INSIG1O15503 277 aa4.99□□□□□ -1.61
PFDN4-202ENST00000441080 HSPA12AO43301 675 aa4.99□□□□□ -1.61
PFDN4-202ENST00000441080 HNRNPCL1O60812 293 aaKnown RBP4.99□□□□□ -1.61
PFDN4-202ENST00000441080 IPO7O95373 1038 aaKnown RBP4.99□□□□□ -1.61
PFDN4-202ENST00000441080 ALPLP05186 524 aa4.99□□□□□ -1.61
PFDN4-202ENST00000441080 PRSS2P07478 247 aa4.99□□□□□ -1.61
PFDN4-202ENST00000441080 ACADMP11310 421 aa4.99□□□□□ -1.61
PFDN4-202ENST00000441080 IL7RP16871 459 aa4.99□□□□□ -1.61
PFDN4-202ENST00000441080 CDKN2AP42771 156 aaKnown RBP4.99□□□□□ -1.61
PFDN4-202ENST00000441080 F2RL1P55085 397 aa4.99□□□□□ -1.61
PFDN4-202ENST00000441080 ARF3P61204 181 aaPredicted RBP4.99□□□□□ -1.61
PFDN4-202ENST00000441080 ARF1P84077 181 aaKnown RBP4.99□□□□□ -1.61
PFDN4-202ENST00000441080 MAMLD1Q13495 774 aa4.99□□□□□ -1.61
PFDN4-202ENST00000441080 EIF4A2Q14240 407 aaKnown RBP4.99□□□□□ -1.61
PFDN4-202ENST00000441080 PLCB4Q15147 1175 aa4.99□□□□□ -1.61
PFDN4-202ENST00000441080 USP41Q3LFD5 358 aa4.99□□□□□ -1.61
PFDN4-202ENST00000441080 EFHC1Q5JVL4 640 aa4.99□□□□□ -1.61
PFDN4-202ENST00000441080 C6orf141Q5SZD1 244 aa4.99□□□□□ -1.61
PFDN4-202ENST00000441080 HYIQ5T013 277 aa4.99□□□□□ -1.61
PFDN4-202ENST00000441080 HIST2H2BCQ6DN03 193 aa4.99□□□□□ -1.61
PFDN4-202ENST00000441080 HIST2H2BDQ6DRA6 164 aa4.99□□□□□ -1.61
PFDN4-202ENST00000441080 TTI2Q6NXR4 508 aa4.99□□□□□ -1.61
PFDN4-202ENST00000441080 NCEH1Q6PIU2 408 aa4.99□□□□□ -1.61
PFDN4-202ENST00000441080 NEK10Q6ZWH5 1172 aa4.99□□□□□ -1.61
PFDN4-202ENST00000441080 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.99□□□□□ -1.61
PFDN4-202ENST00000441080 HAPLN4Q86UW8 402 aa4.99□□□□□ -1.61
PFDN4-202ENST00000441080 SLC41A2Q96JW4 573 aa4.99□□□□□ -1.61
PFDN4-202ENST00000441080 TMEM47Q9BQJ4 181 aa4.99□□□□□ -1.61
PFDN4-202ENST00000441080 CHCHD6Q9BRQ6 235 aa4.99□□□□□ -1.61
PFDN4-202ENST00000441080 SLC25A33Q9BSK2 321 aa4.99□□□□□ -1.61
PFDN4-202ENST00000441080 ITPAQ9BY32 194 aa4.99□□□□□ -1.61
PFDN4-202ENST00000441080 KRTAP9-8Q9BYQ0 159 aa4.99□□□□□ -1.61
PFDN4-202ENST00000441080 IFIH1Q9BYX4 1025 aaKnown RBP4.99□□□□□ -1.61
PFDN4-202ENST00000441080 MKKSQ9NPJ1 570 aaPredicted RBP4.99□□□□□ -1.61
PFDN4-202ENST00000441080 GPR108Q9NPR9 543 aa4.99□□□□□ -1.61
PFDN4-202ENST00000441080 SLCO3A1Q9UIG8 710 aa4.99□□□□□ -1.61
PFDN4-202ENST00000441080 RCOR1Q9UKL0 485 aa4.99□□□□□ -1.61
PFDN4-202ENST00000441080 CEPT1Q9Y6K0 416 aa4.99□□□□□ -1.61
PFDN4-202ENST00000441080 FAM237AA0A1B0GTK4 181 aa4.98□□□□□ -1.61
PFDN4-202ENST00000441080 A0A1W2PQF6 199 aa4.98□□□□□ -1.61
PFDN4-202ENST00000441080 LINC01553A4QN01 128 aa4.98□□□□□ -1.61
PFDN4-202ENST00000441080 FAM90A8PA6NJQ4 464 aa4.98□□□□□ -1.61
PFDN4-202ENST00000441080 LIPT2A6NK58 231 aa4.98□□□□□ -1.61
PFDN4-202ENST00000441080 ZIC3O60481 467 aa4.98□□□□□ -1.61
PFDN4-202ENST00000441080 KCNJ13O60928 360 aa4.98□□□□□ -1.61
PFDN4-202ENST00000441080 ZBED4O75132 1171 aa4.98□□□□□ -1.61
PFDN4-202ENST00000441080 NKX2-2O95096 273 aa4.98□□□□□ -1.61
PFDN4-202ENST00000441080 GLUD1P00367 558 aa4.98□□□□□ -1.61
PFDN4-202ENST00000441080 EIF2S1P05198 315 aaKnown RBP4.98□□□□□ -1.61
PFDN4-202ENST00000441080 CYC1P08574 325 aa4.98□□□□□ -1.61
PFDN4-202ENST00000441080 FAM90A13PP0C7W8 464 aa4.98□□□□□ -1.61
PFDN4-202ENST00000441080 FAM90A24PP0C7X0 464 aa4.98□□□□□ -1.61
PFDN4-202ENST00000441080 SNHG28P0DPA3 235 aa4.98□□□□□ -1.61
PFDN4-202ENST00000441080 ZNF182P17025 639 aaPredicted RBP4.98□□□□□ -1.61
PFDN4-202ENST00000441080 HNRNPH1P31943 449 aaKnown RBP4.98□□□□□ -1.61
PFDN4-202ENST00000441080 GLUD2P49448 558 aa4.98□□□□□ -1.61
PFDN4-202ENST00000441080 EGR4Q05215 589 aa4.98□□□□□ -1.61
PFDN4-202ENST00000441080 TRAF2Q12933 501 aa4.98□□□□□ -1.61
PFDN4-202ENST00000441080 C2orf68Q2NKX9 166 aa4.98□□□□□ -1.61
PFDN4-202ENST00000441080 PPP6R3Q5H9R7 873 aaPredicted RBP4.98□□□□□ -1.61
PFDN4-202ENST00000441080 CXorf66Q5JRM2 361 aaPredicted RBP4.98□□□□□ -1.61
PFDN4-202ENST00000441080 ANKRD54Q6NXT1 300 aa4.98□□□□□ -1.61
PFDN4-202ENST00000441080 B3GNT6Q6ZMB0 384 aa4.98□□□□□ -1.61
PFDN4-202ENST00000441080 ZC3HC1Q86WB0 502 aaKnown RBP4.98□□□□□ -1.61
PFDN4-202ENST00000441080 WDR63Q8IWG1 891 aa4.98□□□□□ -1.61
PFDN4-202ENST00000441080 CCDC13Q8IYE1 715 aa4.98□□□□□ -1.61
PFDN4-202ENST00000441080 DSELQ8IZU8 1212 aa4.98□□□□□ -1.61
PFDN4-202ENST00000441080 FAM216AQ8WUB2 273 aa4.98□□□□□ -1.61
PFDN4-202ENST00000441080 ARHGEF2Q92974 986 aaKnown RBP4.98□□□□□ -1.61
PFDN4-202ENST00000441080 WDFY2Q96P53 400 aa4.98□□□□□ -1.61
PFDN4-202ENST00000441080 TMEM204Q9BSN7 226 aa4.98□□□□□ -1.61
PFDN4-202ENST00000441080 C1QTNF5Q9BXJ0 243 aa4.98□□□□□ -1.61
PFDN4-202ENST00000441080 SEZ6LQ9BYH1 1024 aa4.98□□□□□ -1.61
PFDN4-202ENST00000441080 NDST4Q9H3R1 872 aa4.98□□□□□ -1.61
PFDN4-202ENST00000441080 ESRP2Q9H6T0 727 aaKnown RBP4.98□□□□□ -1.61
PFDN4-202ENST00000441080 POLR1BQ9H9Y6 1135 aa4.98□□□□□ -1.61
PFDN4-202ENST00000441080 BLOC1S4Q9NUP1 217 aa4.98□□□□□ -1.61
PFDN4-202ENST00000441080 CORO1CQ9ULV4 474 aaPredicted RBP4.98□□□□□ -1.61
PFDN4-202ENST00000441080 ADAM18Q9Y3Q7 739 aa4.98□□□□□ -1.61
PFDN4-202ENST00000441080 LAS1LQ9Y4W2 734 aaKnown RBP4.98□□□□□ -1.61
PFDN4-202ENST00000441080 ACAA1P09110 424 aaPredicted RBP4.97□□□□□ -1.61
PFDN4-202ENST00000441080 EIF2S3P41091 472 aaKnown RBP4.97□□□□□ -1.61
PFDN4-202ENST00000441080 COMPP49747 757 aaPredicted RBP4.97□□□□□ -1.61
PFDN4-202ENST00000441080 FHL1Q13642 323 aa4.97□□□□□ -1.61
PFDN4-202ENST00000441080 EFNB3Q15768 340 aa4.97□□□□□ -1.61
PFDN4-202ENST00000441080 HLFQ16534 295 aa4.97□□□□□ -1.61
PFDN4-202ENST00000441080 SLC45A4Q5BKX6 768 aa4.97□□□□□ -1.61
PFDN4-202ENST00000441080 PDXDC1Q6P996 788 aa4.97□□□□□ -1.61
PFDN4-202ENST00000441080 IKBIPQ70UQ0 350 aa4.97□□□□□ -1.61
PFDN4-202ENST00000441080 ARHGAP12Q8IWW6 846 aa4.97□□□□□ -1.61
PFDN4-202ENST00000441080 IQCF1Q8N6M8 205 aa4.97□□□□□ -1.61
PFDN4-202ENST00000441080 ELP5Q8TE02 316 aa4.97□□□□□ -1.61
PFDN4-202ENST00000441080 PHF21BQ96EK2 531 aa4.97□□□□□ -1.61
PFDN4-202ENST00000441080 ZNF479Q96JC4 524 aa4.97□□□□□ -1.61
PFDN4-202ENST00000441080 TMEM68Q96MH6 324 aa4.97□□□□□ -1.61
PFDN4-202ENST00000441080 WACQ9BTA9 647 aa4.97□□□□□ -1.61
PFDN4-202ENST00000441080 HINT3Q9NQE9 182 aaKnown RBP4.97□□□□□ -1.61
PFDN4-202ENST00000441080 EIF2B3Q9NR50 452 aaKnown RBP4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms