RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 VIPR1P32241 457 aa19.92■□□□□ 0.78
SHROOM1-204ENST00000440118 HK3P52790 923 aa19.92■□□□□ 0.78
SHROOM1-204ENST00000440118 TAS2R40P59535 323 aa19.92■□□□□ 0.78
SHROOM1-204ENST00000440118 SRP54P61011 504 aaKnown RBP19.92■□□□□ 0.78
SHROOM1-204ENST00000440118 GALNT2Q10471 571 aa19.92■□□□□ 0.78
SHROOM1-204ENST00000440118 TRAF2Q12933 501 aa19.92■□□□□ 0.78
SHROOM1-204ENST00000440118 AGERQ15109 404 aa19.92■□□□□ 0.78
SHROOM1-204ENST00000440118 ALG11Q2TAA5 492 aa19.92■□□□□ 0.78
SHROOM1-204ENST00000440118 ATP13A4Q4VNC1 1196 aa19.92■□□□□ 0.78
SHROOM1-204ENST00000440118 USP45Q70EL2 814 aa19.92■□□□□ 0.78
SHROOM1-204ENST00000440118 PCDH19Q8TAB3 1148 aa19.92■□□□□ 0.78
SHROOM1-204ENST00000440118 DCBLD2Q96PD2 775 aa19.92■□□□□ 0.78
SHROOM1-204ENST00000440118 SEMA3CQ99985 751 aa19.92■□□□□ 0.78
SHROOM1-204ENST00000440118 WDR26Q9H7D7 661 aa19.92■□□□□ 0.78
SHROOM1-204ENST00000440118 NHEJ1Q9H9Q4 299 aaPredicted RBP19.92■□□□□ 0.78
SHROOM1-204ENST00000440118 SIRPGQ9P1W8 387 aa19.92■□□□□ 0.78
SHROOM1-204ENST00000440118 MOSPD1Q9UJG1 213 aa19.92■□□□□ 0.78
SHROOM1-204ENST00000440118 PHTF1Q9UMS5 762 aa19.92■□□□□ 0.78
SHROOM1-204ENST00000440118 LHX6Q9UPM6 363 aa19.92■□□□□ 0.78
SHROOM1-204ENST00000440118 ZFYVE26Q68DK2 2539 aa19.92■□□□□ 0.78
SHROOM1-204ENST00000440118 RP1P56715 2156 aa19.91■□□□□ 0.78
SHROOM1-204ENST00000440118 ASXL3Q9C0F0 2248 aa19.91■□□□□ 0.78
SHROOM1-204ENST00000440118 HTRA2O43464 458 aaPredicted RBP19.91■□□□□ 0.78
SHROOM1-204ENST00000440118 CAPNS1P04632 268 aa19.91■□□□□ 0.78
SHROOM1-204ENST00000440118 CR2P20023 1033 aa19.91■□□□□ 0.78
SHROOM1-204ENST00000440118 CA4P22748 312 aa19.91■□□□□ 0.78
SHROOM1-204ENST00000440118 IL4RP24394 825 aa19.91■□□□□ 0.78
SHROOM1-204ENST00000440118 EPHB1P54762 984 aa19.91■□□□□ 0.78
SHROOM1-204ENST00000440118 PAFAH1B3Q15102 231 aaKnown RBP19.91■□□□□ 0.78
SHROOM1-204ENST00000440118 IFI16Q16666 785 aaKnown RBP19.91■□□□□ 0.78
SHROOM1-204ENST00000440118 C6orf132Q5T0Z8 1188 aa19.91■□□□□ 0.78
SHROOM1-204ENST00000440118 GUSBP11Q6P575 273 aa19.91■□□□□ 0.78
SHROOM1-204ENST00000440118 GKN2Q86XP6 184 aa19.91■□□□□ 0.78
SHROOM1-204ENST00000440118 RHOT2Q8IXI1 618 aa19.91■□□□□ 0.78
SHROOM1-204ENST00000440118 DCBLD1Q8N8Z6 715 aa19.91■□□□□ 0.78
SHROOM1-204ENST00000440118 PLA2G15Q8NCC3 412 aa19.91■□□□□ 0.78
SHROOM1-204ENST00000440118 CCNYQ8ND76 341 aa19.91■□□□□ 0.78
SHROOM1-204ENST00000440118 SLC35G2Q8TBE7 412 aa19.91■□□□□ 0.78
SHROOM1-204ENST00000440118 FAM71BQ8TC56 605 aa19.91■□□□□ 0.78
SHROOM1-204ENST00000440118 NAT6Q93015 286 aa19.91■□□□□ 0.78
SHROOM1-204ENST00000440118 CHP1Q99653 195 aa19.91■□□□□ 0.78
SHROOM1-204ENST00000440118 TRIM5Q9C035 493 aa19.91■□□□□ 0.78
SHROOM1-204ENST00000440118 NRSN2Q9GZP1 204 aa19.91■□□□□ 0.78
SHROOM1-204ENST00000440118 GULP1Q9UBP9 304 aa19.91■□□□□ 0.78
SHROOM1-204ENST00000440118 PNMA8BQ9ULN7 279 aaPredicted RBP19.91■□□□□ 0.78
SHROOM1-204ENST00000440118 ADAMTS20P59510 1910 aa19.9■□□□□ 0.78
SHROOM1-204ENST00000440118 LY6G6EA0A0G2JKS1 128 aa19.9■□□□□ 0.78
SHROOM1-204ENST00000440118 AKR1B15C9JRZ8 316 aaPredicted RBP19.9■□□□□ 0.78
SHROOM1-204ENST00000440118 PGLSO95336 258 aa19.9■□□□□ 0.78
SHROOM1-204ENST00000440118 TNFP01375 233 aa19.9■□□□□ 0.78
SHROOM1-204ENST00000440118 ARSEP51690 589 aa19.9■□□□□ 0.78
SHROOM1-204ENST00000440118 KIAA1024LP59773 190 aa19.9■□□□□ 0.78
SHROOM1-204ENST00000440118 CNGA3Q16281 694 aa19.9■□□□□ 0.78
SHROOM1-204ENST00000440118 ASTE1Q2TB18 679 aaPredicted RBP19.9■□□□□ 0.78
SHROOM1-204ENST00000440118 C19orf48Q6RUI8 117 aa19.9■□□□□ 0.78
SHROOM1-204ENST00000440118 CRTC1Q6UUV9 634 aa19.9■□□□□ 0.78
SHROOM1-204ENST00000440118 PDXPQ96GD0 296 aa19.9■□□□□ 0.78
SHROOM1-204ENST00000440118 MAK16Q9BXY0 300 aaKnown RBP19.9■□□□□ 0.78
SHROOM1-204ENST00000440118 RAI2Q9Y5P3 530 aa19.9■□□□□ 0.78
SHROOM1-204ENST00000440118 U3KQA8 63 aa19.9■□□□□ 0.78
SHROOM1-204ENST00000440118 PDE2AO00408 941 aaPredicted RBP19.89■□□□□ 0.77
SHROOM1-204ENST00000440118 YY2O15391 372 aa19.89■□□□□ 0.77
SHROOM1-204ENST00000440118 CSO75390 466 aaKnown RBP19.89■□□□□ 0.77
SHROOM1-204ENST00000440118 HEXIM1O94992 359 aaKnown RBP19.89■□□□□ 0.77
SHROOM1-204ENST00000440118 CELA2BP08218 269 aaPredicted RBP19.89■□□□□ 0.77
SHROOM1-204ENST00000440118 TNNT1P13805 278 aa19.89■□□□□ 0.77
SHROOM1-204ENST00000440118 CTPS1P17812 591 aa19.89■□□□□ 0.77
SHROOM1-204ENST00000440118 SLC35F3Q8IY50 421 aa19.89■□□□□ 0.77
SHROOM1-204ENST00000440118 CACTIN-AS1Q8N1I8 211 aa19.89■□□□□ 0.77
SHROOM1-204ENST00000440118 ARL10Q8N8L6 244 aa19.89■□□□□ 0.77
SHROOM1-204ENST00000440118 OR56A4Q8NGH8 313 aa19.89■□□□□ 0.77
SHROOM1-204ENST00000440118 FUBP1Q96AE4 644 aaKnown RBP19.89■□□□□ 0.77
SHROOM1-204ENST00000440118 NSMCE3Q96MG7 304 aa19.89■□□□□ 0.77
SHROOM1-204ENST00000440118 BOCQ9BWV1 1114 aa19.89■□□□□ 0.77
SHROOM1-204ENST00000440118 CLPBQ9H078 707 aa19.89■□□□□ 0.77
SHROOM1-204ENST00000440118 PHPT1Q9NRX4 125 aaPredicted RBP19.89■□□□□ 0.77
SHROOM1-204ENST00000440118 RBM22Q9NW64 420 aaKnown RBP eCLIP19.89■□□□□ 0.77
SHROOM1-204ENST00000440118 KCTD5Q9NXV2 234 aa19.89■□□□□ 0.77
SHROOM1-204ENST00000440118 RALYQ9UKM9 306 aaKnown RBP19.89■□□□□ 0.77
SHROOM1-204ENST00000440118 GPR34Q9UPC5 381 aa19.89■□□□□ 0.77
SHROOM1-204ENST00000440118 EME2A4GXA9 379 aaPredicted RBP19.88■□□□□ 0.77
SHROOM1-204ENST00000440118 NPIPB15A6NHN6 443 aaPredicted RBP19.88■□□□□ 0.77
SHROOM1-204ENST00000440118 MATN3O15232 486 aa19.88■□□□□ 0.77
SHROOM1-204ENST00000440118 KRT1P04264 644 aa19.88■□□□□ 0.77
SHROOM1-204ENST00000440118 KDELR1P24390 212 aa19.88■□□□□ 0.77
SHROOM1-204ENST00000440118 CCNCP24863 283 aa19.88■□□□□ 0.77
SHROOM1-204ENST00000440118 ARHGAP25P42331 645 aa19.88■□□□□ 0.77
SHROOM1-204ENST00000440118 GBE1Q04446 702 aa19.88■□□□□ 0.77
SHROOM1-204ENST00000440118 RAET1GQ6H3X3 334 aa19.88■□□□□ 0.77
SHROOM1-204ENST00000440118 PNCKQ6P2M8 343 aa19.88■□□□□ 0.77
SHROOM1-204ENST00000440118 TEX26Q8N6G2 289 aa19.88■□□□□ 0.77
SHROOM1-204ENST00000440118 TPCN2Q8NHX9 752 aa19.88■□□□□ 0.77
SHROOM1-204ENST00000440118 HNRNPLLQ8WVV9 542 aaKnown RBP19.88■□□□□ 0.77
SHROOM1-204ENST00000440118 SPOCK2Q92563 424 aa19.88■□□□□ 0.77
SHROOM1-204ENST00000440118 SUDS3Q9H7L9 328 aaPredicted RBP19.88■□□□□ 0.77
SHROOM1-204ENST00000440118 GPSM3Q9Y4H4 160 aa19.88■□□□□ 0.77
SHROOM1-204ENST00000440118 PCDHB1Q9Y5F3 818 aa19.88■□□□□ 0.77
SHROOM1-204ENST00000440118 HEY1Q9Y5J3 304 aa19.88■□□□□ 0.77
SHROOM1-204ENST00000440118 PSMD11O00231 422 aa19.87■□□□□ 0.77
SHROOM1-204ENST00000440118 SPOPO43791 374 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms