RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 PPP2R5EQ16537 467 aa23.71■■□□□ 1.39
VARS-217ENST00000440048 TXLNBQ8N3L3 684 aa23.71■■□□□ 1.39
VARS-217ENST00000440048 MCCC1Q96RQ3 725 aaPredicted RBP23.71■■□□□ 1.39
VARS-217ENST00000440048 TDRD1Q9BXT4 1180 aaKnown RBP23.71■■□□□ 1.39
VARS-217ENST00000440048 SEPT10Q9P0V9 454 aa23.71■■□□□ 1.39
VARS-217ENST00000440048 KLF15Q9UIH9 416 aa23.71■■□□□ 1.39
VARS-217ENST00000440048 CHKBQ9Y259 395 aa23.71■■□□□ 1.39
VARS-217ENST00000440048 GOLGA4Q13439 2230 aaKnown RBP23.7■■□□□ 1.38
VARS-217ENST00000440048 MACROD2A1Z1Q3 448 aa23.7■■□□□ 1.38
VARS-217ENST00000440048 GOLGA8CPA6NN73 597 aa23.7■■□□□ 1.38
VARS-217ENST00000440048 HEXIM1O94992 359 aaKnown RBP23.7■■□□□ 1.38
VARS-217ENST00000440048 LDOC1O95751 146 aaPredicted RBP23.7■■□□□ 1.38
VARS-217ENST00000440048 PCCBP05166 539 aa23.7■■□□□ 1.38
VARS-217ENST00000440048 NME1P15531 152 aaKnown RBP23.7■■□□□ 1.38
VARS-217ENST00000440048 LHCGRP22888 699 aa23.7■■□□□ 1.38
VARS-217ENST00000440048 HNRNPKP61978 463 aaKnown RBP eCLIP23.7■■□□□ 1.38
VARS-217ENST00000440048 ACOX1Q15067 660 aa23.7■■□□□ 1.38
VARS-217ENST00000440048 PRKD1Q15139 912 aaPredicted RBP23.7■■□□□ 1.38
VARS-217ENST00000440048 USP45Q70EL2 814 aa23.7■■□□□ 1.38
VARS-217ENST00000440048 PLA2G15Q8NCC3 412 aa23.7■■□□□ 1.38
VARS-217ENST00000440048 P3H4Q92791 437 aa23.7■■□□□ 1.38
VARS-217ENST00000440048 CNDP2Q96KP4 475 aaKnown RBP23.7■■□□□ 1.38
VARS-217ENST00000440048 COQ10AQ96MF6 247 aa23.7■■□□□ 1.38
VARS-217ENST00000440048 SMIM14Q96QK8 99 aa23.7■■□□□ 1.38
VARS-217ENST00000440048 HEMGNQ9BXL5 484 aa23.7■■□□□ 1.38
VARS-217ENST00000440048 CCDC66A2RUB6 948 aa23.69■■□□□ 1.38
VARS-217ENST00000440048 HYAL3O43820 417 aaPredicted RBP23.69■■□□□ 1.38
VARS-217ENST00000440048 PRLP01236 227 aa23.69■■□□□ 1.38
VARS-217ENST00000440048 ALPIP09923 528 aa23.69■■□□□ 1.38
VARS-217ENST00000440048 SPINK2P20155 84 aa23.69■■□□□ 1.38
VARS-217ENST00000440048 CA4P22748 312 aa23.69■■□□□ 1.38
VARS-217ENST00000440048 CD86P42081 329 aa23.69■■□□□ 1.38
VARS-217ENST00000440048 PEX5P50542 639 aa23.69■■□□□ 1.38
VARS-217ENST00000440048 COPS2P61201 443 aa23.69■■□□□ 1.38
VARS-217ENST00000440048 SKOR1P84550 965 aa23.69■■□□□ 1.38
VARS-217ENST00000440048 MTM1Q13496 603 aa23.69■■□□□ 1.38
VARS-217ENST00000440048 MACC1Q6ZN28 852 aa23.69■■□□□ 1.38
VARS-217ENST00000440048 BBS12Q6ZW61 710 aa23.69■■□□□ 1.38
VARS-217ENST00000440048 RAB44Q7Z6P3 723 aaPredicted RBP23.69■■□□□ 1.38
VARS-217ENST00000440048 TSPAN33Q86UF1 283 aa23.69■■□□□ 1.38
VARS-217ENST00000440048 NT5DC3Q86UY8 548 aa23.69■■□□□ 1.38
VARS-217ENST00000440048 NDUFAF2Q8N183 169 aa23.69■■□□□ 1.38
VARS-217ENST00000440048 CBARPQ8N350 705 aaPredicted RBP23.69■■□□□ 1.38
VARS-217ENST00000440048 CHCHD4Q8N4Q1 142 aa23.69■■□□□ 1.38
VARS-217ENST00000440048 TFB1MQ8WVM0 346 aaKnown RBP23.69■■□□□ 1.38
VARS-217ENST00000440048 ADAMTS14Q8WXS8 1223 aa23.69■■□□□ 1.38
VARS-217ENST00000440048 HAUS1Q96CS2 278 aa23.69■■□□□ 1.38
VARS-217ENST00000440048 AGAP3Q96P47 875 aa23.69■■□□□ 1.38
VARS-217ENST00000440048 APOOQ9BUR5 198 aa23.69■■□□□ 1.38
VARS-217ENST00000440048 PNMA8BQ9ULN7 279 aaPredicted RBP23.69■■□□□ 1.38
VARS-217ENST00000440048 OR1A2Q9Y585 309 aa23.69■■□□□ 1.38
VARS-217ENST00000440048 FRYQ5TBA9 3013 aa23.69■■□□□ 1.38
VARS-217ENST00000440048 IGF2RP11717 2491 aa23.68■■□□□ 1.38
VARS-217ENST00000440048 AKAP13Q12802 2813 aa23.68■■□□□ 1.38
VARS-217ENST00000440048 A0A0J9YYE9 177 aa23.68■■□□□ 1.38
VARS-217ENST00000440048 H3BM21 787 aa23.68■■□□□ 1.38
VARS-217ENST00000440048 TRIM38O00635 465 aa23.68■■□□□ 1.38
VARS-217ENST00000440048 ENC1O14682 589 aa23.68■■□□□ 1.38
VARS-217ENST00000440048 DKK1O94907 266 aa23.68■■□□□ 1.38
VARS-217ENST00000440048 TRBC1P01850 177 aa23.68■■□□□ 1.38
VARS-217ENST00000440048 JUNDP17535 347 aa23.68■■□□□ 1.38
VARS-217ENST00000440048 HNF1BP35680 557 aa23.68■■□□□ 1.38
VARS-217ENST00000440048 EPHB1P54762 984 aa23.68■■□□□ 1.38
VARS-217ENST00000440048 DENND2CQ68D51 928 aa23.68■■□□□ 1.38
VARS-217ENST00000440048 HSD11B1LQ7Z5J1 315 aa23.68■■□□□ 1.38
VARS-217ENST00000440048 HERPUD2Q9BSE4 406 aa23.68■■□□□ 1.38
VARS-217ENST00000440048 PCDH9Q9HC56 1237 aa23.68■■□□□ 1.38
VARS-217ENST00000440048 A0A0U1RQS6 177 aa23.67■■□□□ 1.38
VARS-217ENST00000440048 FFAR2O15552 330 aa23.67■■□□□ 1.38
VARS-217ENST00000440048 GIMD1P0DJR0 217 aa23.67■■□□□ 1.38
VARS-217ENST00000440048 PTPN3P26045 913 aa23.67■■□□□ 1.38
VARS-217ENST00000440048 RWDD2BP57060 319 aa23.67■■□□□ 1.38
VARS-217ENST00000440048 RPL26P61254 145 aaKnown RBP23.67■■□□□ 1.38
VARS-217ENST00000440048 ARHGEF7Q14155 803 aa23.67■■□□□ 1.38
VARS-217ENST00000440048 NFATC4Q14934 902 aa23.67■■□□□ 1.38
VARS-217ENST00000440048 TEX44Q53QW1 395 aa23.67■■□□□ 1.38
VARS-217ENST00000440048 CRTC1Q6UUV9 634 aa23.67■■□□□ 1.38
VARS-217ENST00000440048 ZC3H18Q86VM9 953 aaKnown RBP23.67■■□□□ 1.38
VARS-217ENST00000440048 ZNF548Q8NEK5 533 aaPredicted RBP23.67■■□□□ 1.38
VARS-217ENST00000440048 LPCAT1Q8NF37 534 aa23.67■■□□□ 1.38
VARS-217ENST00000440048 OR4C6Q8NH72 309 aa23.67■■□□□ 1.38
VARS-217ENST00000440048 ALG3Q92685 438 aa23.67■■□□□ 1.38
VARS-217ENST00000440048 NUS1Q96E22 293 aa23.67■■□□□ 1.38
VARS-217ENST00000440048 IMP4Q96G21 291 aaKnown RBP23.67■■□□□ 1.38
VARS-217ENST00000440048 RBM15Q96T37 977 aaKnown RBP eCLIP23.67■■□□□ 1.38
VARS-217ENST00000440048 SCNM1Q9BWG6 230 aa23.67■■□□□ 1.38
VARS-217ENST00000440048 OSBPL8Q9BZF1 889 aa23.67■■□□□ 1.38
VARS-217ENST00000440048 SLC25A51Q9H1U9 297 aa23.67■■□□□ 1.38
VARS-217ENST00000440048 AMFRQ9UKV5 643 aa23.67■■□□□ 1.38
VARS-217ENST00000440048 RPL26L1Q9UNX3 145 aaKnown RBP23.67■■□□□ 1.38
VARS-217ENST00000440048 ADGRG1Q9Y653 693 aa23.67■■□□□ 1.38
VARS-217ENST00000440048 PTPRBP23467 1997 aa23.66■■□□□ 1.38
VARS-217ENST00000440048 PSMD11O00231 422 aa23.66■■□□□ 1.38
VARS-217ENST00000440048 SIGLEC6O43699 453 aa23.66■■□□□ 1.38
VARS-217ENST00000440048 PTPN7P35236 360 aa23.66■■□□□ 1.38
VARS-217ENST00000440048 ETV3P41162 512 aa23.66■■□□□ 1.38
VARS-217ENST00000440048 DNAJC3Q13217 504 aa23.66■■□□□ 1.38
VARS-217ENST00000440048 ZNF211Q13398 564 aaPredicted RBP23.66■■□□□ 1.38
VARS-217ENST00000440048 ESRP1Q6NXG1 681 aaKnown RBP23.66■■□□□ 1.38
VARS-217ENST00000440048 PEX26Q7Z412 305 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms