RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 CASS4Q9NQ75 786 aa9.08□□□□□ -0.96
COPB1-202ENST00000439561 POLE4Q9NR33 117 aa9.08□□□□□ -0.96
COPB1-202ENST00000439561 TRHDEQ9UKU6 1024 aa9.08□□□□□ -0.96
COPB1-202ENST00000439561 BAG5Q9UL15 447 aa9.08□□□□□ -0.96
COPB1-202ENST00000439561 ORC6Q9Y5N6 252 aa9.08□□□□□ -0.96
COPB1-202ENST00000439561 U3KQV3 271 aa9.08□□□□□ -0.96
COPB1-202ENST00000439561 COL5A3P25940 1745 aaPredicted RBP9.07□□□□□ -0.96
COPB1-202ENST00000439561 LRRC14BA6NHZ5 514 aa9.07□□□□□ -0.96
COPB1-202ENST00000439561 AP3B1O00203 1094 aa9.07□□□□□ -0.96
COPB1-202ENST00000439561 NME4O00746 187 aa9.07□□□□□ -0.96
COPB1-202ENST00000439561 CNOT3O75175 753 aaKnown RBP9.07□□□□□ -0.96
COPB1-202ENST00000439561 DLGAP3O95886 979 aa9.07□□□□□ -0.96
COPB1-202ENST00000439561 PIRTP0C851 137 aa9.07□□□□□ -0.96
COPB1-202ENST00000439561 CYP2C9P11712 490 aa9.07□□□□□ -0.96
COPB1-202ENST00000439561 FCGR1AP12314 374 aa9.07□□□□□ -0.96
COPB1-202ENST00000439561 CYP2B6P20813 491 aa9.07□□□□□ -0.96
COPB1-202ENST00000439561 PSMB9P28065 219 aa9.07□□□□□ -0.96
COPB1-202ENST00000439561 TAF6P49848 677 aa9.07□□□□□ -0.96
COPB1-202ENST00000439561 ECT2LQ008S8 904 aa9.07□□□□□ -0.96
COPB1-202ENST00000439561 LIPEQ05469 1076 aa9.07□□□□□ -0.96
COPB1-202ENST00000439561 AASDHQ4L235 1098 aaPredicted RBP9.07□□□□□ -0.96
COPB1-202ENST00000439561 CELF3Q5SZQ8 465 aaKnown RBP9.07□□□□□ -0.96
COPB1-202ENST00000439561 PIWIL3Q7Z3Z3 882 aaKnown RBP9.07□□□□□ -0.96
COPB1-202ENST00000439561 PIM3Q86V86 326 aa9.07□□□□□ -0.96
COPB1-202ENST00000439561 HEATR4Q86WZ0 1026 aa9.07□□□□□ -0.96
COPB1-202ENST00000439561 BLOC1S5Q8TDH9 187 aa9.07□□□□□ -0.96
COPB1-202ENST00000439561 AFG1LQ8WV93 481 aa9.07□□□□□ -0.96
COPB1-202ENST00000439561 PPM1MQ96MI6 270 aa9.07□□□□□ -0.96
COPB1-202ENST00000439561 ZNF560Q96MR9 790 aa9.07□□□□□ -0.96
COPB1-202ENST00000439561 C17orf80Q9BSJ5 609 aa9.07□□□□□ -0.96
COPB1-202ENST00000439561 TBCDQ9BTW9 1192 aa9.07□□□□□ -0.96
COPB1-202ENST00000439561 THUMPD3Q9BV44 507 aaKnown RBP9.07□□□□□ -0.96
COPB1-202ENST00000439561 EIF2AQ9BY44 585 aaKnown RBP9.07□□□□□ -0.96
COPB1-202ENST00000439561 SPATC1LQ9H0A9 340 aa9.07□□□□□ -0.96
COPB1-202ENST00000439561 BRD8Q9H0E9 1235 aa9.07□□□□□ -0.96
COPB1-202ENST00000439561 ALG2Q9H553 416 aa9.07□□□□□ -0.96
COPB1-202ENST00000439561 STRCQ7RTU9 1775 aa9.07□□□□□ -0.96
COPB1-202ENST00000439561 A0A087X1B8 175 aa9.07□□□□□ -0.96
COPB1-202ENST00000439561 OR51F1A6NGY5 319 aa9.07□□□□□ -0.96
COPB1-202ENST00000439561 CCDC154A6NI56 674 aa9.07□□□□□ -0.96
COPB1-202ENST00000439561 YJEFN3A6XGL0 299 aa9.07□□□□□ -0.96
COPB1-202ENST00000439561 HS6ST1O60243 411 aa9.07□□□□□ -0.96
COPB1-202ENST00000439561 NPHS1O60500 1241 aa9.07□□□□□ -0.96
COPB1-202ENST00000439561 SYNCRIPO60506 623 aaKnown RBP9.07□□□□□ -0.96
COPB1-202ENST00000439561 DEAF1O75398 565 aaPredicted RBP9.07□□□□□ -0.96
COPB1-202ENST00000439561 GABBR2O75899 941 aa9.07□□□□□ -0.96
COPB1-202ENST00000439561 C8BP07358 591 aa9.07□□□□□ -0.96
COPB1-202ENST00000439561 TGFB3P10600 412 aa9.07□□□□□ -0.96
COPB1-202ENST00000439561 BDNFP23560 247 aa9.07□□□□□ -0.96
COPB1-202ENST00000439561 ICAM3P32942 547 aa9.07□□□□□ -0.96
COPB1-202ENST00000439561 IL5RAQ01344 420 aa9.07□□□□□ -0.96
COPB1-202ENST00000439561 CHRNB3Q05901 458 aa9.07□□□□□ -0.96
COPB1-202ENST00000439561 CD300CQ08708 224 aa9.07□□□□□ -0.96
COPB1-202ENST00000439561 NFATC3Q12968 1075 aa9.07□□□□□ -0.96
COPB1-202ENST00000439561 LRP8Q14114 963 aa9.07□□□□□ -0.96
COPB1-202ENST00000439561 NHSL2Q5HYW2 709 aa9.07□□□□□ -0.96
COPB1-202ENST00000439561 SPESP1Q6UW49 350 aa9.07□□□□□ -0.96
COPB1-202ENST00000439561 ARHGAP36Q6ZRI8 547 aa9.07□□□□□ -0.96
COPB1-202ENST00000439561 LYSMD3Q7Z3D4 306 aa9.07□□□□□ -0.96
COPB1-202ENST00000439561 TFAP2DQ7Z6R9 452 aa9.07□□□□□ -0.96
COPB1-202ENST00000439561 SLCO6A1Q86UG4 719 aa9.07□□□□□ -0.96
COPB1-202ENST00000439561 B3GALNT2Q8NCR0 500 aa9.07□□□□□ -0.96
COPB1-202ENST00000439561 TBC1D15Q8TC07 691 aa9.07□□□□□ -0.96
COPB1-202ENST00000439561 CAPSLQ8WWF8 208 aa9.07□□□□□ -0.96
COPB1-202ENST00000439561 IRGQQ8WZA9 623 aa9.07□□□□□ -0.96
COPB1-202ENST00000439561 HTRA1Q92743 480 aa9.07□□□□□ -0.96
COPB1-202ENST00000439561 ESAMQ96AP7 390 aa9.07□□□□□ -0.96
COPB1-202ENST00000439561 CCDC97Q96F63 343 aaPredicted RBP9.07□□□□□ -0.96
COPB1-202ENST00000439561 ZMAT2Q96NC0 199 aaKnown RBP9.07□□□□□ -0.96
COPB1-202ENST00000439561 HERC2P3Q9BVR0 1158 aa9.07□□□□□ -0.96
COPB1-202ENST00000439561 SLC2A11Q9BYW1 496 aa9.07□□□□□ -0.96
COPB1-202ENST00000439561 HMG20AQ9NP66 347 aa9.07□□□□□ -0.96
COPB1-202ENST00000439561 NT5MQ9NPB1 228 aa9.07□□□□□ -0.96
COPB1-202ENST00000439561 ABCB10Q9NRK6 738 aa9.07□□□□□ -0.96
COPB1-202ENST00000439561 RGS18Q9NS28 235 aa9.07□□□□□ -0.96
COPB1-202ENST00000439561 MRGBPQ9NV56 204 aa9.07□□□□□ -0.96
COPB1-202ENST00000439561 SLC38A7Q9NVC3 462 aa9.07□□□□□ -0.96
COPB1-202ENST00000439561 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.07□□□□□ -0.96
COPB1-202ENST00000439561 VPS28Q9UK41 221 aa9.07□□□□□ -0.96
COPB1-202ENST00000439561 CNOT11Q9UKZ1 510 aaKnown RBP9.07□□□□□ -0.96
COPB1-202ENST00000439561 PNMA8BQ9ULN7 279 aaPredicted RBP9.07□□□□□ -0.96
COPB1-202ENST00000439561 FAM50BQ9Y247 325 aa9.07□□□□□ -0.96
COPB1-202ENST00000439561 TMA7Q9Y2S6 64 aaKnown RBP9.07□□□□□ -0.96
COPB1-202ENST00000439561 NCAM2O15394 837 aa9.07□□□□□ -0.96
COPB1-202ENST00000439561 NOBOXO60393 691 aa9.07□□□□□ -0.96
COPB1-202ENST00000439561 XYLBO75191 536 aa9.07□□□□□ -0.96
COPB1-202ENST00000439561 LRIG2O94898 1065 aa9.07□□□□□ -0.96
COPB1-202ENST00000439561 DPEP1P16444 411 aa9.07□□□□□ -0.96
COPB1-202ENST00000439561 TKTP29401 623 aaKnown RBP9.07□□□□□ -0.96
COPB1-202ENST00000439561 CCR1P32246 355 aa9.07□□□□□ -0.96
COPB1-202ENST00000439561 GSSP48637 474 aa9.07□□□□□ -0.96
COPB1-202ENST00000439561 CLCN2P51788 898 aa9.07□□□□□ -0.96
COPB1-202ENST00000439561 BTBD8Q5XKL5 378 aa9.07□□□□□ -0.96
COPB1-202ENST00000439561 WSCD1Q658N2 575 aa9.07□□□□□ -0.96
COPB1-202ENST00000439561 TWF2Q6IBS0 349 aaKnown RBP9.07□□□□□ -0.96
COPB1-202ENST00000439561 NANOGP8Q6NSW7 305 aa9.07□□□□□ -0.96
COPB1-202ENST00000439561 DLK2Q6UY11 383 aa9.07□□□□□ -0.96
COPB1-202ENST00000439561 CLEC14AQ86T13 490 aa9.07□□□□□ -0.96
COPB1-202ENST00000439561 SLC22A9Q8IVM8 553 aa9.07□□□□□ -0.96
COPB1-202ENST00000439561 ANKRD13AQ8IZ07 590 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms