RNA–Protein interactions for RNA: ENST00000435914.1

PNKDP1-201, Transcript of PNKD pseudogene 1, humanhuman

BASIC

Gene PNKDP1, Length 430 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKDP1-201ENST00000435914 HAUS4Q9H6D7 363 aa6.2□□□□□ -1.42
PNKDP1-201ENST00000435914 ATP13A3Q9H7F0 1226 aa6.2□□□□□ -1.42
PNKDP1-201ENST00000435914 MRPL40Q9NQ50 206 aaKnown RBP6.2□□□□□ -1.42
PNKDP1-201ENST00000435914 SEPT11Q9NVA2 429 aaKnown RBP6.2□□□□□ -1.42
PNKDP1-201ENST00000435914 ETNK2Q9NVF9 386 aa6.2□□□□□ -1.42
PNKDP1-201ENST00000435914 TMEM63CQ9P1W3 806 aa6.2□□□□□ -1.42
PNKDP1-201ENST00000435914 KLQ9UEF7 1012 aa6.2□□□□□ -1.42
PNKDP1-201ENST00000435914 PCSK1NQ9UHG2 260 aa6.2□□□□□ -1.42
PNKDP1-201ENST00000435914 PPIL1Q9Y3C6 166 aa6.2□□□□□ -1.42
PNKDP1-201ENST00000435914 PCDHGA7Q9Y5G6 932 aa6.2□□□□□ -1.42
PNKDP1-201ENST00000435914 ST14Q9Y5Y6 855 aa6.2□□□□□ -1.42
PNKDP1-201ENST00000435914 TLN1Q9Y490 2541 aaKnown RBP6.2□□□□□ -1.42
PNKDP1-201ENST00000435914 ZFC3H1O60293 1989 aaKnown RBP6.19□□□□□ -1.42
PNKDP1-201ENST00000435914 TTC24A2A3L6 582 aaPredicted RBP6.19□□□□□ -1.42
PNKDP1-201ENST00000435914 EIF4E1BA6NMX2 242 aaKnown RBP6.19□□□□□ -1.42
PNKDP1-201ENST00000435914 TMCO5BA8MYB1 307 aa6.19□□□□□ -1.42
PNKDP1-201ENST00000435914 PLD2O14939 933 aa6.19□□□□□ -1.42
PNKDP1-201ENST00000435914 PRPSAP2O60256 369 aa6.19□□□□□ -1.42
PNKDP1-201ENST00000435914 FZD6O60353 706 aa6.19□□□□□ -1.42
PNKDP1-201ENST00000435914 MAFKO60675 156 aa6.19□□□□□ -1.42
PNKDP1-201ENST00000435914 SOCS5O75159 536 aa6.19□□□□□ -1.42
PNKDP1-201ENST00000435914 HEXIM1O94992 359 aaKnown RBP6.19□□□□□ -1.42
PNKDP1-201ENST00000435914 TNFSF15O95150 251 aa6.19□□□□□ -1.42
PNKDP1-201ENST00000435914 SOD1P00441 154 aa6.19□□□□□ -1.42
PNKDP1-201ENST00000435914 TNFP01375 233 aa6.19□□□□□ -1.42
PNKDP1-201ENST00000435914 FTLP02792 175 aaPredicted RBP6.19□□□□□ -1.42
PNKDP1-201ENST00000435914 PCCBP05166 539 aa6.19□□□□□ -1.42
PNKDP1-201ENST00000435914 RPLP0P05388 317 aaKnown RBP6.19□□□□□ -1.42
PNKDP1-201ENST00000435914 CEACAM5P06731 702 aa6.19□□□□□ -1.42
PNKDP1-201ENST00000435914 GLB1P16278 677 aa6.19□□□□□ -1.42
PNKDP1-201ENST00000435914 CDK11BP21127 795 aaKnown RBP6.19□□□□□ -1.42
PNKDP1-201ENST00000435914 XPAP23025 273 aaPredicted RBP6.19□□□□□ -1.42
PNKDP1-201ENST00000435914 IL4RP24394 825 aa6.19□□□□□ -1.42
PNKDP1-201ENST00000435914 HTR1BP28222 390 aa6.19□□□□□ -1.42
PNKDP1-201ENST00000435914 TEAD1P28347 426 aa6.19□□□□□ -1.42
PNKDP1-201ENST00000435914 RBMS1P29558 406 aaKnown RBP6.19□□□□□ -1.42
PNKDP1-201ENST00000435914 UGT1A5P35504 534 aa6.19□□□□□ -1.42
PNKDP1-201ENST00000435914 PBX1P40424 430 aa6.19□□□□□ -1.42
PNKDP1-201ENST00000435914 SCNN1BP51168 640 aa6.19□□□□□ -1.42
PNKDP1-201ENST00000435914 BCL2L1Q07817 233 aa6.19□□□□□ -1.42
PNKDP1-201ENST00000435914 TRAF2Q12933 501 aa6.19□□□□□ -1.42
PNKDP1-201ENST00000435914 EIF3IQ13347 325 aaKnown RBP6.19□□□□□ -1.42
PNKDP1-201ENST00000435914 LBRQ14739 615 aaKnown RBP6.19□□□□□ -1.42
PNKDP1-201ENST00000435914 NR1I3Q14994 352 aa6.19□□□□□ -1.42
PNKDP1-201ENST00000435914 NR1D2Q14995 579 aa6.19□□□□□ -1.42
PNKDP1-201ENST00000435914 IQCB1Q15051 598 aa6.19□□□□□ -1.42
PNKDP1-201ENST00000435914 TCEA2Q15560 299 aa6.19□□□□□ -1.42
PNKDP1-201ENST00000435914 CNGA3Q16281 694 aa6.19□□□□□ -1.42
PNKDP1-201ENST00000435914 PPP6R3Q5H9R7 873 aaPredicted RBP6.19□□□□□ -1.42
PNKDP1-201ENST00000435914 FIGNQ5HY92 759 aa6.19□□□□□ -1.42
PNKDP1-201ENST00000435914 CCDC183Q5T5S1 534 aa6.19□□□□□ -1.42
PNKDP1-201ENST00000435914 TMCO4Q5TGY1 634 aa6.19□□□□□ -1.42
PNKDP1-201ENST00000435914 BROXQ5VW32 411 aa6.19□□□□□ -1.42
PNKDP1-201ENST00000435914 PNCKQ6P2M8 343 aa6.19□□□□□ -1.42
PNKDP1-201ENST00000435914 RD3Q7Z3Z2 195 aa6.19□□□□□ -1.42
PNKDP1-201ENST00000435914 ZNF438Q7Z4V0 828 aa6.19□□□□□ -1.42
PNKDP1-201ENST00000435914 POLNQ7Z5Q5 900 aa6.19□□□□□ -1.42
PNKDP1-201ENST00000435914 SPRED1Q7Z699 444 aa6.19□□□□□ -1.42
PNKDP1-201ENST00000435914 GKN2Q86XP6 184 aa6.19□□□□□ -1.42
PNKDP1-201ENST00000435914 NRROSQ86YC3 692 aa6.19□□□□□ -1.42
PNKDP1-201ENST00000435914 SLITRK4Q8IW52 837 aa6.19□□□□□ -1.42
PNKDP1-201ENST00000435914 ARL14Q8N4G2 192 aa6.19□□□□□ -1.42
PNKDP1-201ENST00000435914 LZTR1Q8N653 840 aa6.19□□□□□ -1.42
PNKDP1-201ENST00000435914 OR6C4Q8NGE1 309 aa6.19□□□□□ -1.42
PNKDP1-201ENST00000435914 FAM71BQ8TC56 605 aa6.19□□□□□ -1.42
PNKDP1-201ENST00000435914 GPBAR1Q8TDU6 330 aa6.19□□□□□ -1.42
PNKDP1-201ENST00000435914 PTCD2Q8WV60 388 aaKnown RBP6.19□□□□□ -1.42
PNKDP1-201ENST00000435914 SCG3Q8WXD2 468 aaKnown RBP6.19□□□□□ -1.42
PNKDP1-201ENST00000435914 SCARF2Q96GP6 870 aaPredicted RBP6.19□□□□□ -1.42
PNKDP1-201ENST00000435914 CSPG4P5Q96PW8 444 aa6.19□□□□□ -1.42
PNKDP1-201ENST00000435914 GFM1Q96RP9 751 aaKnown RBP6.19□□□□□ -1.42
PNKDP1-201ENST00000435914 MCCC1Q96RQ3 725 aaPredicted RBP6.19□□□□□ -1.42
PNKDP1-201ENST00000435914 NUDCD1Q96RS6 583 aa6.19□□□□□ -1.42
PNKDP1-201ENST00000435914 MGME1Q9BQP7 344 aa6.19□□□□□ -1.42
PNKDP1-201ENST00000435914 FUCA2Q9BTY2 467 aa6.19□□□□□ -1.42
PNKDP1-201ENST00000435914 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.19□□□□□ -1.42
PNKDP1-201ENST00000435914 CINPQ9BW66 212 aaPredicted RBP6.19□□□□□ -1.42
PNKDP1-201ENST00000435914 TEX101Q9BY14 249 aa6.19□□□□□ -1.42
PNKDP1-201ENST00000435914 FRMD8Q9BZ67 464 aaPredicted RBP6.19□□□□□ -1.42
PNKDP1-201ENST00000435914 FOXP3Q9BZS1 431 aa6.19□□□□□ -1.42
PNKDP1-201ENST00000435914 TMEM168Q9H0V1 697 aa6.19□□□□□ -1.42
PNKDP1-201ENST00000435914 LRRN3Q9H3W5 708 aa6.19□□□□□ -1.42
PNKDP1-201ENST00000435914 SIRPGQ9P1W8 387 aa6.19□□□□□ -1.42
PNKDP1-201ENST00000435914 GULP1Q9UBP9 304 aa6.19□□□□□ -1.42
PNKDP1-201ENST00000435914 B4GALT6Q9UBX8 382 aa6.19□□□□□ -1.42
PNKDP1-201ENST00000435914 CNOT8Q9UFF9 292 aaKnown RBP6.19□□□□□ -1.42
PNKDP1-201ENST00000435914 SEPT3Q9UH03 358 aa6.19□□□□□ -1.42
PNKDP1-201ENST00000435914 GPR34Q9UPC5 381 aa6.19□□□□□ -1.42
PNKDP1-201ENST00000435914 RNF215Q9Y6U7 377 aa6.19□□□□□ -1.42
PNKDP1-201ENST00000435914 MYO18BQ8IUG5 2567 aa6.19□□□□□ -1.42
PNKDP1-201ENST00000435914 SDK2Q58EX2 2172 aa6.18□□□□□ -1.42
PNKDP1-201ENST00000435914 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.18□□□□□ -1.42
PNKDP1-201ENST00000435914 PRSS38A1L453 326 aa6.18□□□□□ -1.42
PNKDP1-201ENST00000435914 NPIPB15A6NHN6 443 aaPredicted RBP6.18□□□□□ -1.42
PNKDP1-201ENST00000435914 DFFAO00273 331 aa6.18□□□□□ -1.42
PNKDP1-201ENST00000435914 CACNB4O00305 520 aaPredicted RBP6.18□□□□□ -1.42
PNKDP1-201ENST00000435914 NVLO15381 856 aaKnown RBP6.18□□□□□ -1.42
PNKDP1-201ENST00000435914 B4GAT1O43505 415 aa6.18□□□□□ -1.42
PNKDP1-201ENST00000435914 NUDT21O43809 227 aaKnown RBP6.18□□□□□ -1.42
PNKDP1-201ENST00000435914 RNF8O76064 485 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms