RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 RNASEH2AO75792 299 aaKnown RBP10.45□□□□□ -0.74
CLSTN1-203ENST00000435891 IPO13O94829 963 aaKnown RBP10.45□□□□□ -0.74
CLSTN1-203ENST00000435891 PAMP19021 973 aa10.45□□□□□ -0.74
CLSTN1-203ENST00000435891 LEPRP48357 1165 aaKnown RBP10.45□□□□□ -0.74
CLSTN1-203ENST00000435891 SERPINH1P50454 418 aaKnown RBP10.45□□□□□ -0.74
CLSTN1-203ENST00000435891 HUNKP57058 714 aa10.45□□□□□ -0.74
CLSTN1-203ENST00000435891 PLOD1Q02809 727 aaPredicted RBP10.45□□□□□ -0.74
CLSTN1-203ENST00000435891 ADGRE1Q14246 886 aa10.45□□□□□ -0.74
CLSTN1-203ENST00000435891 DSC3Q14574 896 aa10.45□□□□□ -0.74
CLSTN1-203ENST00000435891 HECTD2Q5U5R9 776 aa10.45□□□□□ -0.74
CLSTN1-203ENST00000435891 PAOXQ6QHF9 649 aa10.45□□□□□ -0.74
CLSTN1-203ENST00000435891 BEND5Q7L4P6 421 aa10.45□□□□□ -0.74
CLSTN1-203ENST00000435891 ARPINQ7Z6K5 226 aa10.45□□□□□ -0.74
CLSTN1-203ENST00000435891 CILP2Q8IUL8 1156 aa10.45□□□□□ -0.74
CLSTN1-203ENST00000435891 PTCD2Q8WV60 388 aaKnown RBP10.45□□□□□ -0.74
CLSTN1-203ENST00000435891 IGSF8Q969P0 613 aa10.45□□□□□ -0.74
CLSTN1-203ENST00000435891 SUSD3Q96L08 255 aa10.45□□□□□ -0.74
CLSTN1-203ENST00000435891 SLC39A3Q9BRY0 314 aa10.45□□□□□ -0.74
CLSTN1-203ENST00000435891 ATP13A1Q9HD20 1204 aa10.45□□□□□ -0.74
CLSTN1-203ENST00000435891 ADA2Q9NZK5 511 aa10.45□□□□□ -0.74
CLSTN1-203ENST00000435891 PTGDR2Q9Y5Y4 395 aa10.45□□□□□ -0.74
CLSTN1-203ENST00000435891 MYO16Q9Y6X6 1858 aa10.44□□□□□ -0.74
CLSTN1-203ENST00000435891 LRRC14BA6NHZ5 514 aa10.44□□□□□ -0.74
CLSTN1-203ENST00000435891 PEX1O43933 1283 aa10.44□□□□□ -0.74
CLSTN1-203ENST00000435891 PIRTP0C851 137 aa10.44□□□□□ -0.74
CLSTN1-203ENST00000435891 PSMD7P51665 324 aa10.44□□□□□ -0.74
CLSTN1-203ENST00000435891 CLCN2P51788 898 aa10.44□□□□□ -0.74
CLSTN1-203ENST00000435891 HK2P52789 917 aa10.44□□□□□ -0.74
CLSTN1-203ENST00000435891 CDH13P55290 713 aa10.44□□□□□ -0.74
CLSTN1-203ENST00000435891 DNAJB13P59910 316 aa10.44□□□□□ -0.74
CLSTN1-203ENST00000435891 CDKL1Q00532 357 aa10.44□□□□□ -0.74
CLSTN1-203ENST00000435891 DMPKQ09013 629 aa10.44□□□□□ -0.74
CLSTN1-203ENST00000435891 FAM83EQ2M2I3 478 aa10.44□□□□□ -0.74
CLSTN1-203ENST00000435891 MS4A13Q5J8X5 152 aa10.44□□□□□ -0.74
CLSTN1-203ENST00000435891 TIGD7Q6NT04 549 aaPredicted RBP10.44□□□□□ -0.74
CLSTN1-203ENST00000435891 LAYNQ6UX15 382 aa10.44□□□□□ -0.74
CLSTN1-203ENST00000435891 ZNF354CQ86Y25 554 aa10.44□□□□□ -0.74
CLSTN1-203ENST00000435891 TICAM1Q8IUC6 712 aa10.44□□□□□ -0.74
CLSTN1-203ENST00000435891 CCDC117Q8IWD4 279 aaPredicted RBP10.44□□□□□ -0.74
CLSTN1-203ENST00000435891 GALNT4Q8N4A0 578 aa10.44□□□□□ -0.74
CLSTN1-203ENST00000435891 KLHDC9Q8NEP7 349 aa10.44□□□□□ -0.74
CLSTN1-203ENST00000435891 ATP6V1E2Q96A05 226 aa10.44□□□□□ -0.74
CLSTN1-203ENST00000435891 SLC39A13Q96H72 371 aa10.44□□□□□ -0.74
CLSTN1-203ENST00000435891 UBXN10Q96LJ8 280 aa10.44□□□□□ -0.74
CLSTN1-203ENST00000435891 C3orf30Q96M34 536 aa10.44□□□□□ -0.74
CLSTN1-203ENST00000435891 ARHGAP39Q9C0H5 1083 aa10.44□□□□□ -0.74
CLSTN1-203ENST00000435891 C6orf203Q9P0P8 240 aaPredicted RBP10.44□□□□□ -0.74
CLSTN1-203ENST00000435891 GIMAP2Q9UG22 337 aa10.44□□□□□ -0.74
CLSTN1-203ENST00000435891 VPS28Q9UK41 221 aa10.44□□□□□ -0.74
CLSTN1-203ENST00000435891 ACTL7AQ9Y615 435 aa10.44□□□□□ -0.74
CLSTN1-203ENST00000435891 TMEM247A6NEH6 219 aa10.44□□□□□ -0.74
CLSTN1-203ENST00000435891 BCAS2O75934 225 aaPredicted RBP10.44□□□□□ -0.74
CLSTN1-203ENST00000435891 PRSS56P0CW18 603 aa10.44□□□□□ -0.74
CLSTN1-203ENST00000435891 SMIM18P0DKX4 95 aa10.44□□□□□ -0.74
CLSTN1-203ENST00000435891 PMLP29590 882 aa10.44□□□□□ -0.74
CLSTN1-203ENST00000435891 OXCT1P55809 520 aa10.44□□□□□ -0.74
CLSTN1-203ENST00000435891 FKBP1BP68106 108 aa10.44□□□□□ -0.74
CLSTN1-203ENST00000435891 PTK2BQ14289 1009 aa10.44□□□□□ -0.74
CLSTN1-203ENST00000435891 HERC3Q15034 1050 aa10.44□□□□□ -0.74
CLSTN1-203ENST00000435891 IL23RQ5VWK5 629 aa10.44□□□□□ -0.74
CLSTN1-203ENST00000435891 B3GNT6Q6ZMB0 384 aa10.44□□□□□ -0.74
CLSTN1-203ENST00000435891 CHSY3Q70JA7 882 aa10.44□□□□□ -0.74
CLSTN1-203ENST00000435891 THEM5Q8N1Q8 247 aa10.44□□□□□ -0.74
CLSTN1-203ENST00000435891 OR52K2Q8NGK3 314 aa10.44□□□□□ -0.74
CLSTN1-203ENST00000435891 EXT2Q93063 718 aa10.44□□□□□ -0.74
CLSTN1-203ENST00000435891 PTERQ96BW5 349 aa10.44□□□□□ -0.74
CLSTN1-203ENST00000435891 SLC45A3Q96JT2 553 aa10.44□□□□□ -0.74
CLSTN1-203ENST00000435891 GRIP2Q9C0E4 1043 aa10.44□□□□□ -0.74
CLSTN1-203ENST00000435891 GSTO2Q9H4Y5 243 aa10.44□□□□□ -0.74
CLSTN1-203ENST00000435891 ARNT2Q9HBZ2 717 aa10.44□□□□□ -0.74
CLSTN1-203ENST00000435891 TBC1D13Q9NVG8 400 aa10.44□□□□□ -0.74
CLSTN1-203ENST00000435891 UXTQ9UBK9 157 aaPredicted RBP10.44□□□□□ -0.74
CLSTN1-203ENST00000435891 RBMX2Q9Y388 322 aaKnown RBP10.44□□□□□ -0.74
CLSTN1-203ENST00000435891 DOCK4Q8N1I0 1966 aa10.44□□□□□ -0.74
CLSTN1-203ENST00000435891 PATJQ8NI35 1801 aa10.44□□□□□ -0.74
CLSTN1-203ENST00000435891 PRSS51A0A1B0GVH4 220 aa10.44□□□□□ -0.74
CLSTN1-203ENST00000435891 HEATR9A2RTY3 570 aa10.44□□□□□ -0.74
CLSTN1-203ENST00000435891 SLC22A2O15244 555 aa10.44□□□□□ -0.74
CLSTN1-203ENST00000435891 CRTAMO95727 393 aa10.44□□□□□ -0.74
CLSTN1-203ENST00000435891 SLC4A1P02730 911 aa10.44□□□□□ -0.74
CLSTN1-203ENST00000435891 HMBSP08397 361 aa10.44□□□□□ -0.74
CLSTN1-203ENST00000435891 LTA4HP09960 611 aaKnown RBP10.44□□□□□ -0.74
CLSTN1-203ENST00000435891 PIM1P11309 404 aaPredicted RBP10.44□□□□□ -0.74
CLSTN1-203ENST00000435891 CHN2P52757 468 aa10.44□□□□□ -0.74
CLSTN1-203ENST00000435891 NAA20P61599 178 aa10.44□□□□□ -0.74
CLSTN1-203ENST00000435891 XIAPP98170 497 aa10.44□□□□□ -0.74
CLSTN1-203ENST00000435891 EFEMP1Q12805 493 aa10.44□□□□□ -0.74
CLSTN1-203ENST00000435891 AGKQ53H12 422 aa10.44□□□□□ -0.74
CLSTN1-203ENST00000435891 SIRPB2Q5JXA9 342 aa10.44□□□□□ -0.74
CLSTN1-203ENST00000435891 C6orf52Q5T4I8 152 aa10.44□□□□□ -0.74
CLSTN1-203ENST00000435891 SETD3Q86TU7 594 aaPredicted RBP10.44□□□□□ -0.74
CLSTN1-203ENST00000435891 MIB1Q86YT6 1006 aa10.44□□□□□ -0.74
CLSTN1-203ENST00000435891 UPF1Q92900 1129 aaKnown RBP eCLIP10.44□□□□□ -0.742e-11■■■■■ 33.7
CLSTN1-203ENST00000435891 B3GALT6Q96L58 329 aa10.44□□□□□ -0.74
CLSTN1-203ENST00000435891 TBATAQ96M53 351 aa10.44□□□□□ -0.74
CLSTN1-203ENST00000435891 LRGUKQ96M69 825 aa10.44□□□□□ -0.74
CLSTN1-203ENST00000435891 NDEL1Q9GZM8 345 aa10.44□□□□□ -0.74
CLSTN1-203ENST00000435891 PRDM5Q9NQX1 630 aaPredicted RBP10.44□□□□□ -0.74
CLSTN1-203ENST00000435891 TRMT13Q9NUP7 481 aaKnown RBP10.44□□□□□ -0.74
CLSTN1-203ENST00000435891 GMIPQ9P107 970 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms