RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 ALDH1A1P00352 501 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 GOT2P00505 430 aaKnown RBP10.44□□□□□ -0.74
CD44-210ENST00000434472 SERPINF2P08697 491 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 PRKAR2AP13861 404 aaKnown RBP10.44□□□□□ -0.74
CD44-210ENST00000434472 CES1P23141 567 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 OR1E1P30953 314 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 ETFBP38117 255 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 ACADVLP49748 655 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 ACLYP53396 1101 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 CDKN2DP55273 166 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 PKNOX1P55347 436 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 HERVK_113P63132 956 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 PRKCZQ05513 592 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 TAF10Q12962 218 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 TRIM32Q13049 653 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 GPR17Q13304 367 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 PDAP1Q13442 181 aaKnown RBP10.44□□□□□ -0.74
CD44-210ENST00000434472 GRM2Q14416 872 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 PDK3Q15120 406 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 LRRC36Q1X8D7 754 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 AGKQ53H12 422 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 ALG1LQ6GMV1 187 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 GK5Q6ZS86 529 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 ISCA2Q86U28 154 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 MIB1Q86YT6 1006 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 PGBD5Q8N414 524 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 BHLHE22Q8NFJ8 381 aaPredicted RBP10.44□□□□□ -0.74
CD44-210ENST00000434472 ANKRD49Q8WVL7 239 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 ASB9Q96DX5 294 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 TMA16Q96EY4 203 aaKnown RBP10.44□□□□□ -0.74
CD44-210ENST00000434472 DCUN1D1Q96GG9 259 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 MARK4Q96L34 752 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 TUBGCP5Q96RT8 1024 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 NPAS2Q99743 824 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 ERVK-6Q9BXR3 956 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 UNKQ9C0B0 810 aaKnown RBP10.44□□□□□ -0.74
CD44-210ENST00000434472 ARHGAP39Q9C0H5 1083 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 TFB2MQ9H5Q4 396 aaKnown RBP10.44□□□□□ -0.74
CD44-210ENST00000434472 ALG9Q9H6U8 611 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 SYTL2Q9HCH5 934 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 CATSPERZQ9NTU4 200 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 ADA2Q9NZK5 511 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 NDUFA13Q9P0J0 144 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 SEPT3Q9UH03 358 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 CNOT11Q9UKZ1 510 aaKnown RBP10.44□□□□□ -0.74
CD44-210ENST00000434472 SRCAPQ6ZRS2 3230 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 MYLKQ15746 1914 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 FRMPD3Q5JV73 1810 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 PRSS51A0A1B0GVH4 220 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 CCDC189A1A4V9 331 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 FAM155AB1AL88 458 aaPredicted RBP10.44□□□□□ -0.74
CD44-210ENST00000434472 H0YJX3 145 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 ACOT8O14734 319 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 PFDN6O15212 129 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 RNASEH1O60930 286 aaKnown RBP10.44□□□□□ -0.74
CD44-210ENST00000434472 VPS4BO75351 444 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 SUPT7LO94864 414 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 HMBSP08397 361 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 FGF4P08620 206 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 ZDHHC11BP0C7U3 371 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 CD1DP15813 335 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 KCNA5P22460 613 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 FGFR3P22607 806 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 ARSDP51689 593 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 CHN2P52757 468 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 ATP6V0D1P61421 351 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 MRPS22P82650 360 aaKnown RBP10.44□□□□□ -0.74
CD44-210ENST00000434472 FOLH1Q04609 750 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 LRP8Q14114 963 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 TRIM25Q14258 630 aaKnown RBP10.44□□□□□ -0.74
CD44-210ENST00000434472 MGAT5BQ3V5L5 792 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 UNC50Q53HI1 259 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 GPR158Q5T848 1215 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 RNF220Q5VTB9 566 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 FAM171A1Q5VUB5 890 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 IRAK1BP1Q5VVH5 260 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 REP15Q6BDI9 236 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 TRAF7Q6Q0C0 670 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 ABI1Q8IZP0 508 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 MARVELD2Q8N4S9 558 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 ATAD1Q8NBU5 361 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 OR4L1Q8NH43 312 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 BLOC1S5Q8TDH9 187 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 LINC01599Q8WXQ3 324 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 USP13Q92995 863 aaPredicted RBP10.44□□□□□ -0.74
CD44-210ENST00000434472 ROPN1LQ96C74 230 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 PHF21BQ96EK2 531 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 TBATAQ96M53 351 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 GLT1D1Q96MS3 346 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 TCF12Q99081 682 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 TSEN34Q9BSV6 310 aaKnown RBP10.44□□□□□ -0.74
CD44-210ENST00000434472 AARSD1Q9BTE6 412 aaKnown RBP10.44□□□□□ -0.74
CD44-210ENST00000434472 MARCH4Q9P2E8 410 aaPredicted RBP10.44□□□□□ -0.74
CD44-210ENST00000434472 RIMS3Q9UJD0 308 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 CROTQ9UKG9 612 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 TMCO1Q9UM00 188 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 FIS1Q9Y3D6 152 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 PCDHGA7Q9Y5G6 932 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 MRPL42Q9Y6G3 142 aaKnown RBP10.44□□□□□ -0.74
CD44-210ENST00000434472 CCDC162PA2VCL2 907 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms