RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 TCTN1Q2MV58 587 aa3.38□□□□□ -1.87
CLK1-204ENST00000432425 PAPPA-AS1Q5QFB9 102 aa3.38□□□□□ -1.87
CLK1-204ENST00000432425 GSG1LQ6UXU4 331 aa3.38□□□□□ -1.87
CLK1-204ENST00000432425 GDPD4Q6W3E5 623 aa3.38□□□□□ -1.87
CLK1-204ENST00000432425 KRBA2Q6ZNG9 492 aa3.38□□□□□ -1.87
CLK1-204ENST00000432425 ZNF771Q7L3S4 317 aaPredicted RBP3.38□□□□□ -1.87
CLK1-204ENST00000432425 ZNF441Q8N8Z8 693 aa3.38□□□□□ -1.87
CLK1-204ENST00000432425 BEST2Q8NFU1 509 aa3.38□□□□□ -1.87
CLK1-204ENST00000432425 FIG4Q92562 907 aa3.38□□□□□ -1.87
CLK1-204ENST00000432425 MAGEE1Q9HCI5 957 aa3.38□□□□□ -1.87
CLK1-204ENST00000432425 C20orf141Q9NUB4 165 aa3.38□□□□□ -1.87
CLK1-204ENST00000432425 GREB1LQ9C091 1923 aaPredicted RBP3.38□□□□□ -1.87
CLK1-204ENST00000432425 MID1O15344 667 aa3.37□□□□□ -1.87
CLK1-204ENST00000432425 XPNPEP2O43895 674 aa3.37□□□□□ -1.87
CLK1-204ENST00000432425 LMX1BO60663 402 aa3.37□□□□□ -1.87
CLK1-204ENST00000432425 RFPL2O75678 378 aa3.37□□□□□ -1.87
CLK1-204ENST00000432425 KCNA5P22460 613 aa3.37□□□□□ -1.87
CLK1-204ENST00000432425 ZBTB17Q13105 803 aa3.37□□□□□ -1.87
CLK1-204ENST00000432425 CTF1Q16619 201 aa3.37□□□□□ -1.87
CLK1-204ENST00000432425 STPG1Q5TH74 334 aa3.37□□□□□ -1.87
CLK1-204ENST00000432425 FOXP4Q8IVH2 680 aaPredicted RBP3.37□□□□□ -1.87
CLK1-204ENST00000432425 HEMGNQ9BXL5 484 aa3.37□□□□□ -1.87
CLK1-204ENST00000432425 DDX4Q9NQI0 724 aaKnown RBP3.37□□□□□ -1.87
CLK1-204ENST00000432425 DGKBQ9Y6T7 804 aa3.37□□□□□ -1.87
CLK1-204ENST00000432425 TSPAN4O14817 238 aa3.36□□□□□ -1.87
CLK1-204ENST00000432425 SOCS5O75159 536 aa3.36□□□□□ -1.87
CLK1-204ENST00000432425 PLGP00747 810 aaPredicted RBP3.36□□□□□ -1.87
CLK1-204ENST00000432425 TFP02787 698 aa3.36□□□□□ -1.87
CLK1-204ENST00000432425 AGAP20933 346 aa3.36□□□□□ -1.87
CLK1-204ENST00000432425 MCM3P25205 808 aa3.36□□□□□ -1.87
CLK1-204ENST00000432425 CNTFP26441 200 aa3.36□□□□□ -1.87
CLK1-204ENST00000432425 IL15P40933 162 aaPredicted RBP3.36□□□□□ -1.87
CLK1-204ENST00000432425 TLE2Q04725 743 aa3.36□□□□□ -1.87
CLK1-204ENST00000432425 ARL16Q0P5N6 197 aa3.36□□□□□ -1.87
CLK1-204ENST00000432425 LCTLQ6UWM7 567 aa3.36□□□□□ -1.87
CLK1-204ENST00000432425 MTSS1LQ765P7 747 aa3.36□□□□□ -1.87
CLK1-204ENST00000432425 TAOK1Q7L7X3 1001 aa3.36□□□□□ -1.87
CLK1-204ENST00000432425 LINGO2Q7L985 606 aa3.36□□□□□ -1.87
CLK1-204ENST00000432425 TDRPQ86YL5 185 aa3.36□□□□□ -1.87
CLK1-204ENST00000432425 DCUN1D3Q8IWE4 304 aa3.36□□□□□ -1.87
CLK1-204ENST00000432425 ZCCHC10Q8TBK6 192 aa3.36□□□□□ -1.87
CLK1-204ENST00000432425 MAGEC3Q8TD91 643 aa3.36□□□□□ -1.87
CLK1-204ENST00000432425 KIF1BPQ96EK5 621 aa3.36□□□□□ -1.87
CLK1-204ENST00000432425 MAELQ96JY0 434 aaKnown RBP3.36□□□□□ -1.87
CLK1-204ENST00000432425 UBXN10Q96LJ8 280 aa3.36□□□□□ -1.87
CLK1-204ENST00000432425 UHRF2Q96PU4 802 aa3.36□□□□□ -1.87
CLK1-204ENST00000432425 TMEM160Q9NX00 188 aa3.36□□□□□ -1.87
CLK1-204ENST00000432425 HSPB7Q9UBY9 170 aa3.36□□□□□ -1.87
CLK1-204ENST00000432425 KCNS2Q9ULS6 477 aa3.36□□□□□ -1.87
CLK1-204ENST00000432425 ARID4BQ4LE39 1312 aaPredicted RBP3.36□□□□□ -1.87
CLK1-204ENST00000432425 PRSS47A8MTI9 375 aa3.36□□□□□ -1.87
CLK1-204ENST00000432425 AKR1B15C9JRZ8 316 aaPredicted RBP3.36□□□□□ -1.87
CLK1-204ENST00000432425 TNPO2O14787 897 aaKnown RBP3.36□□□□□ -1.87
CLK1-204ENST00000432425 HNRNPA1P09651 372 aaKnown RBP eCLIP3.36□□□□□ -1.87
CLK1-204ENST00000432425 G6PDP11413 515 aa3.36□□□□□ -1.87
CLK1-204ENST00000432425 COX7A2P14406 83 aa3.36□□□□□ -1.87
CLK1-204ENST00000432425 TCEA1P23193 301 aaKnown RBP3.36□□□□□ -1.87
CLK1-204ENST00000432425 EIF2S3P41091 472 aaKnown RBP3.36□□□□□ -1.87
CLK1-204ENST00000432425 ZNF132P52740 706 aa3.36□□□□□ -1.87
CLK1-204ENST00000432425 RAD23BP54727 409 aa3.36□□□□□ -1.87
CLK1-204ENST00000432425 SEC61BP60468 96 aaKnown RBP3.36□□□□□ -1.87
CLK1-204ENST00000432425 UFM1P61960 85 aa3.36□□□□□ -1.87
CLK1-204ENST00000432425 VAMP2P63027 116 aa3.36□□□□□ -1.87
CLK1-204ENST00000432425 RPP30P78346 268 aaKnown RBP3.36□□□□□ -1.87
CLK1-204ENST00000432425 BIRC3Q13489 604 aa3.36□□□□□ -1.87
CLK1-204ENST00000432425 TRPC3Q13507 836 aa3.36□□□□□ -1.87
CLK1-204ENST00000432425 CAMK1Q14012 370 aa3.36□□□□□ -1.87
CLK1-204ENST00000432425 RNPS1Q15287 305 aaKnown RBP3.36□□□□□ -1.87
CLK1-204ENST00000432425 GPR68Q15743 365 aa3.36□□□□□ -1.87
CLK1-204ENST00000432425 SYT16Q17RD7 645 aa3.36□□□□□ -1.87
CLK1-204ENST00000432425 ACCSLQ4AC99 568 aa3.36□□□□□ -1.87
CLK1-204ENST00000432425 SGO1Q5FBB7 561 aa3.36□□□□□ -1.87
CLK1-204ENST00000432425 CYP26C1Q6V0L0 522 aa3.36□□□□□ -1.87
CLK1-204ENST00000432425 FOXL2NBQ6ZUU3 175 aa3.36□□□□□ -1.87
CLK1-204ENST00000432425 DHX40Q8IX18 779 aaKnown RBP3.36□□□□□ -1.87
CLK1-204ENST00000432425 ZBTB2Q8N680 514 aa3.36□□□□□ -1.87
CLK1-204ENST00000432425 PPM1EQ8WY54 764 aa3.36□□□□□ -1.87
CLK1-204ENST00000432425 RND1Q92730 232 aa3.36□□□□□ -1.87
CLK1-204ENST00000432425 KLHL15Q96M94 604 aa3.36□□□□□ -1.87
CLK1-204ENST00000432425 MPHOSPH8Q99549 860 aa3.36□□□□□ -1.87
CLK1-204ENST00000432425 FUZQ9BT04 418 aa3.36□□□□□ -1.87
CLK1-204ENST00000432425 HAUS8Q9BT25 410 aa3.36□□□□□ -1.87
CLK1-204ENST00000432425 H2AFJQ9BTM1 129 aa3.36□□□□□ -1.87
CLK1-204ENST00000432425 MKKSQ9NPJ1 570 aaPredicted RBP3.36□□□□□ -1.87
CLK1-204ENST00000432425 PPP1R14DQ9NXH3 145 aa3.36□□□□□ -1.87
CLK1-204ENST00000432425 C1RLQ9NZP8 487 aa3.36□□□□□ -1.87
CLK1-204ENST00000432425 ERRFI1Q9UJM3 462 aaPredicted RBP3.36□□□□□ -1.87
CLK1-204ENST00000432425 FBXO9Q9UK97 447 aaPredicted RBP3.36□□□□□ -1.87
CLK1-204ENST00000432425 POU2F3Q9UKI9 436 aa3.36□□□□□ -1.87
CLK1-204ENST00000432425 TBX20Q9UMR3 447 aa3.36□□□□□ -1.87
CLK1-204ENST00000432425 LSM4Q9Y4Z0 139 aaKnown RBP3.36□□□□□ -1.87
CLK1-204ENST00000432425 STON1Q9Y6Q2 735 aa3.36□□□□□ -1.87
CLK1-204ENST00000432425 TMEM202A6NGA9 273 aa3.35□□□□□ -1.87
CLK1-204ENST00000432425 TTC36A6NLP5 189 aa3.35□□□□□ -1.87
CLK1-204ENST00000432425 CRYAAP02489 173 aa3.35□□□□□ -1.87
CLK1-204ENST00000432425 SP1P08047 785 aa3.35□□□□□ -1.87
CLK1-204ENST00000432425 RRM1P23921 792 aa3.35□□□□□ -1.87
CLK1-204ENST00000432425 GGT5P36269 586 aa3.35□□□□□ -1.87
CLK1-204ENST00000432425 GABRB2P47870 512 aa3.35□□□□□ -1.87
CLK1-204ENST00000432425 PPM1FP49593 454 aaPredicted RBP3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms