RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 RPL6Q02878 288 aaKnown RBP11.03□□□□□ -0.64
CHD4-202ENST00000430771 DMWDQ09019 674 aa11.03□□□□□ -0.64
CHD4-202ENST00000430771 CUL1Q13616 776 aa11.03□□□□□ -0.64
CHD4-202ENST00000430771 SEPT6Q14141 434 aa11.03□□□□□ -0.64
CHD4-202ENST00000430771 CNGA3Q16281 694 aa11.03□□□□□ -0.64
CHD4-202ENST00000430771 HIF1AQ16665 826 aa11.03□□□□□ -0.64
CHD4-202ENST00000430771 LRRC66Q68CR7 880 aa11.03□□□□□ -0.64
CHD4-202ENST00000430771 ZC3H14Q6PJT7 736 aaKnown RBP11.03□□□□□ -0.64
CHD4-202ENST00000430771 CEP128Q6ZU80 1094 aa11.03□□□□□ -0.64
CHD4-202ENST00000430771 ZNF534Q76KX8 674 aa11.03□□□□□ -0.64
CHD4-202ENST00000430771 TRIM69Q86WT6 500 aa11.03□□□□□ -0.64
CHD4-202ENST00000430771 IFT20Q8IY31 132 aa11.03□□□□□ -0.64
CHD4-202ENST00000430771 RAVER1Q8IY67 606 aaKnown RBP11.03□□□□□ -0.64
CHD4-202ENST00000430771 PDIK1LQ8N165 341 aa11.03□□□□□ -0.64
CHD4-202ENST00000430771 LRRN4CLQ8ND94 238 aa11.03□□□□□ -0.64
CHD4-202ENST00000430771 PTCD2Q8WV60 388 aaKnown RBP11.03□□□□□ -0.64
CHD4-202ENST00000430771 GAB3Q8WWW8 586 aa11.03□□□□□ -0.64
CHD4-202ENST00000430771 RLN3Q8WXF3 142 aa11.03□□□□□ -0.64
CHD4-202ENST00000430771 RHOXF2Q9BQY4 288 aa11.03□□□□□ -0.64
CHD4-202ENST00000430771 C1QTNF7Q9BXJ2 289 aa11.03□□□□□ -0.64
CHD4-202ENST00000430771 GPR63Q9BZJ6 419 aa11.03□□□□□ -0.64
CHD4-202ENST00000430771 FOXP3Q9BZS1 431 aa11.03□□□□□ -0.64
CHD4-202ENST00000430771 PHACTR1Q9C0D0 580 aa11.03□□□□□ -0.64
CHD4-202ENST00000430771 ZFYVE1Q9HBF4 777 aa11.03□□□□□ -0.64
CHD4-202ENST00000430771 EPB41L5Q9HCM4 733 aa11.03□□□□□ -0.64
CHD4-202ENST00000430771 RAD18Q9NS91 495 aa11.03□□□□□ -0.64
CHD4-202ENST00000430771 KCTD5Q9NXV2 234 aa11.03□□□□□ -0.64
CHD4-202ENST00000430771 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.03□□□□□ -0.64
CHD4-202ENST00000430771 PKD2L2Q9NZM6 624 aa11.03□□□□□ -0.64
CHD4-202ENST00000430771 SAMD15Q9P1V8 674 aa11.03□□□□□ -0.64
CHD4-202ENST00000430771 MTRF1LQ9UGC7 380 aaKnown RBP11.03□□□□□ -0.64
CHD4-202ENST00000430771 GGT7Q9UJ14 662 aa11.03□□□□□ -0.64
CHD4-202ENST00000430771 PCDHGA2Q9Y5H1 932 aa11.03□□□□□ -0.64
CHD4-202ENST00000430771 ZNF318Q5VUA4 2279 aa11.02□□□□□ -0.64
CHD4-202ENST00000430771 PLXNA2O75051 1894 aa11.02□□□□□ -0.64
CHD4-202ENST00000430771 TBC1D3DA0A087WVF3 549 aa11.02□□□□□ -0.65
CHD4-202ENST00000430771 TBC1D3IA0A087WXS9 549 aa11.02□□□□□ -0.65
CHD4-202ENST00000430771 TBC1D3EA0A087X179 549 aa11.02□□□□□ -0.65
CHD4-202ENST00000430771 TBC1D3KA0A087X1G2 549 aa11.02□□□□□ -0.65
CHD4-202ENST00000430771 ESYT3A0FGR9 886 aa11.02□□□□□ -0.65
CHD4-202ENST00000430771 HEATR9A2RTY3 570 aa11.02□□□□□ -0.65
CHD4-202ENST00000430771 TBC1D3FA6NER0 549 aaPredicted RBP11.02□□□□□ -0.65
CHD4-202ENST00000430771 PRR23AA6NEV1 266 aa11.02□□□□□ -0.65
CHD4-202ENST00000430771 C2orf81A6NN90 581 aa11.02□□□□□ -0.65
CHD4-202ENST00000430771 MEI4A8MW99 385 aa11.02□□□□□ -0.65
CHD4-202ENST00000430771 TBC1D3LB9A6J9 549 aa11.02□□□□□ -0.65
CHD4-202ENST00000430771 MAP3K13O43283 966 aa11.02□□□□□ -0.65
CHD4-202ENST00000430771 LZTS3O60299 673 aaPredicted RBP11.02□□□□□ -0.65
CHD4-202ENST00000430771 RNGTTO60942 597 aaKnown RBP11.02□□□□□ -0.65
CHD4-202ENST00000430771 TM7SF2O76062 418 aa11.02□□□□□ -0.65
CHD4-202ENST00000430771 TBC1D3HP0C7X1 549 aa11.02□□□□□ -0.65
CHD4-202ENST00000430771 PIRTP0C851 137 aa11.02□□□□□ -0.65
CHD4-202ENST00000430771 SP9P0CG40 484 aa11.02□□□□□ -0.65
CHD4-202ENST00000430771 C6P13671 934 aa11.02□□□□□ -0.65
CHD4-202ENST00000430771 LHCGRP22888 699 aa11.02□□□□□ -0.65
CHD4-202ENST00000430771 ACSL1P33121 698 aa11.02□□□□□ -0.65
CHD4-202ENST00000430771 GRIA1P42261 906 aa11.02□□□□□ -0.65
CHD4-202ENST00000430771 MAGEA3P43357 314 aa11.02□□□□□ -0.65
CHD4-202ENST00000430771 NPY2RP49146 381 aa11.02□□□□□ -0.65
CHD4-202ENST00000430771 SESN2P58004 480 aaPredicted RBP11.02□□□□□ -0.65
CHD4-202ENST00000430771 TAS2R38P59533 333 aa11.02□□□□□ -0.65
CHD4-202ENST00000430771 HLTFQ14527 1009 aaKnown RBP eCLIP11.02□□□□□ -0.65
CHD4-202ENST00000430771 POU6F1Q14863 301 aa11.02□□□□□ -0.65
CHD4-202ENST00000430771 TAF1AQ15573 450 aaPredicted RBP11.02□□□□□ -0.65
CHD4-202ENST00000430771 SETMARQ53H47 684 aaPredicted RBP11.02□□□□□ -0.65
CHD4-202ENST00000430771 ZDHHC20Q5W0Z9 365 aa11.02□□□□□ -0.65
CHD4-202ENST00000430771 KIAA0895LQ68EN5 471 aa11.02□□□□□ -0.65
CHD4-202ENST00000430771 TBC1D3GQ6DHY5 549 aa11.02□□□□□ -0.65
CHD4-202ENST00000430771 TBC1D3CQ6IPX1 549 aa11.02□□□□□ -0.65
CHD4-202ENST00000430771 DENND5AQ6IQ26 1287 aa11.02□□□□□ -0.65
CHD4-202ENST00000430771 NLRP9Q7RTR0 991 aa11.02□□□□□ -0.65
CHD4-202ENST00000430771 LYSMD3Q7Z3D4 306 aa11.02□□□□□ -0.65
CHD4-202ENST00000430771 HORMAD1Q86X24 394 aa11.02□□□□□ -0.65
CHD4-202ENST00000430771 TBC1D3Q8IZP1 549 aaPredicted RBP11.02□□□□□ -0.65
CHD4-202ENST00000430771 ZCCHC9Q8N567 271 aaKnown RBP11.02□□□□□ -0.65
CHD4-202ENST00000430771 BRSK1Q8TDC3 778 aa11.02□□□□□ -0.65
CHD4-202ENST00000430771 UBXN4Q92575 508 aa11.02□□□□□ -0.65
CHD4-202ENST00000430771 NELL1Q92832 810 aa11.02□□□□□ -0.65
CHD4-202ENST00000430771 FOXJ1Q92949 421 aa11.02□□□□□ -0.65
CHD4-202ENST00000430771 RANBP9Q96S59 729 aa11.02□□□□□ -0.65
CHD4-202ENST00000430771 LRFN3Q9BTN0 628 aa11.02□□□□□ -0.65
CHD4-202ENST00000430771 WRAP53Q9BUR4 548 aaKnown RBP11.02□□□□□ -0.65
CHD4-202ENST00000430771 GPR174Q9BXC1 333 aa11.02□□□□□ -0.65
CHD4-202ENST00000430771 MRM3Q9HC36 420 aaKnown RBP11.02□□□□□ -0.65
CHD4-202ENST00000430771 PIH1D1Q9NWS0 290 aaKnown RBP11.02□□□□□ -0.65
CHD4-202ENST00000430771 GRHL1Q9NZI5 618 aa11.02□□□□□ -0.65
CHD4-202ENST00000430771 DMGDHQ9UI17 866 aaKnown RBP11.02□□□□□ -0.65
CHD4-202ENST00000430771 PKP3Q9Y446 797 aa11.02□□□□□ -0.65
CHD4-202ENST00000430771 LRRK1Q38SD2 2015 aa11.02□□□□□ -0.65
CHD4-202ENST00000430771 A0A1W2PQU0 124 aa11.01□□□□□ -0.65
CHD4-202ENST00000430771 RGSL1A5PLK6 1076 aa11.01□□□□□ -0.65
CHD4-202ENST00000430771 BHMG1C9JSJ3 638 aaPredicted RBP11.01□□□□□ -0.65
CHD4-202ENST00000430771 DLL1O00548 723 aa11.01□□□□□ -0.65
CHD4-202ENST00000430771 EIF3HO15372 352 aaKnown RBP eCLIP11.01□□□□□ -0.65
CHD4-202ENST00000430771 STX7O15400 261 aaKnown RBP11.01□□□□□ -0.65
CHD4-202ENST00000430771 C1SP09871 688 aa11.01□□□□□ -0.65
CHD4-202ENST00000430771 MCM3P25205 808 aa11.01□□□□□ -0.65
CHD4-202ENST00000430771 MGAT1P26572 445 aa11.01□□□□□ -0.65
CHD4-202ENST00000430771 HMGCLP35914 325 aa11.01□□□□□ -0.65
CHD4-202ENST00000430771 LIG3P49916 1009 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms