RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 TMEM272A0A1B0GTI8 110 aa3.07□□□□□ -1.92
HMGB1P9-201ENST00000429856 A0A1W2PPC1 479 aa3.07□□□□□ -1.92
HMGB1P9-201ENST00000429856 CBY3A6NI87 242 aa3.07□□□□□ -1.92
HMGB1P9-201ENST00000429856 KIF1CO43896 1103 aaKnown RBP3.07□□□□□ -1.92
HMGB1P9-201ENST00000429856 TGDSO95455 350 aa3.07□□□□□ -1.92
HMGB1P9-201ENST00000429856 CBX6O95503 412 aa3.07□□□□□ -1.92
HMGB1P9-201ENST00000429856 RB1P06400 928 aa3.07□□□□□ -1.92
HMGB1P9-201ENST00000429856 CHRNB1P11230 501 aa3.07□□□□□ -1.92
HMGB1P9-201ENST00000429856 FMO4P31512 558 aa3.07□□□□□ -1.92
HMGB1P9-201ENST00000429856 CTNNA1P35221 906 aaKnown RBP3.07□□□□□ -1.92
HMGB1P9-201ENST00000429856 PIP4K2AP48426 406 aaPredicted RBP3.07□□□□□ -1.92
HMGB1P9-201ENST00000429856 F2RL1P55085 397 aa3.07□□□□□ -1.92
HMGB1P9-201ENST00000429856 CALD1Q05682 793 aaKnown RBP3.07□□□□□ -1.92
HMGB1P9-201ENST00000429856 RUNX2Q13950 521 aa3.07□□□□□ -1.92
HMGB1P9-201ENST00000429856 PTGR1Q14914 329 aa3.07□□□□□ -1.92
HMGB1P9-201ENST00000429856 RPE65Q16518 533 aa3.07□□□□□ -1.92
HMGB1P9-201ENST00000429856 ME3Q16798 604 aa3.07□□□□□ -1.92
HMGB1P9-201ENST00000429856 LEXMQ3ZCV2 418 aa3.07□□□□□ -1.92
HMGB1P9-201ENST00000429856 DAB2IPQ5VWQ8 1189 aa3.07□□□□□ -1.92
HMGB1P9-201ENST00000429856 KIAA1161Q6NSJ0 714 aa3.07□□□□□ -1.92
HMGB1P9-201ENST00000429856 DLK2Q6UY11 383 aa3.07□□□□□ -1.92
HMGB1P9-201ENST00000429856 RRM2BQ7LG56 351 aa3.07□□□□□ -1.92
HMGB1P9-201ENST00000429856 TADA2BQ86TJ2 420 aa3.07□□□□□ -1.92
HMGB1P9-201ENST00000429856 AACSQ86V21 672 aa3.07□□□□□ -1.92
HMGB1P9-201ENST00000429856 KBTBD6Q86V97 674 aa3.07□□□□□ -1.92
HMGB1P9-201ENST00000429856 CCDC25Q86WR0 208 aa3.07□□□□□ -1.92
HMGB1P9-201ENST00000429856 TDRPQ86YL5 185 aa3.07□□□□□ -1.92
HMGB1P9-201ENST00000429856 CAMK1DQ8IU85 385 aa3.07□□□□□ -1.92
HMGB1P9-201ENST00000429856 ARHGAP12Q8IWW6 846 aa3.07□□□□□ -1.92
HMGB1P9-201ENST00000429856 DHX40Q8IX18 779 aaKnown RBP3.07□□□□□ -1.92
HMGB1P9-201ENST00000429856 CPXM2Q8N436 756 aa3.07□□□□□ -1.92
HMGB1P9-201ENST00000429856 POC5Q8NA72 575 aa3.07□□□□□ -1.92
HMGB1P9-201ENST00000429856 TMEM174Q8WUU8 243 aa3.07□□□□□ -1.92
HMGB1P9-201ENST00000429856 HSPH1Q92598 858 aa3.07□□□□□ -1.92
HMGB1P9-201ENST00000429856 GTF3C6Q969F1 213 aa3.07□□□□□ -1.92
HMGB1P9-201ENST00000429856 VPS33AQ96AX1 596 aa3.07□□□□□ -1.92
HMGB1P9-201ENST00000429856 ELMOD3Q96FG2 381 aa3.07□□□□□ -1.92
HMGB1P9-201ENST00000429856 PGAP3Q96FM1 320 aaPredicted RBP3.07□□□□□ -1.92
HMGB1P9-201ENST00000429856 ZNF419Q96HQ0 510 aaPredicted RBP3.07□□□□□ -1.92
HMGB1P9-201ENST00000429856 GCNAQ96QF7 691 aa3.07□□□□□ -1.92
HMGB1P9-201ENST00000429856 APOL6Q9BWW8 343 aa3.07□□□□□ -1.92
HMGB1P9-201ENST00000429856 NUF2Q9BZD4 464 aa3.07□□□□□ -1.92
HMGB1P9-201ENST00000429856 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.07□□□□□ -1.92
HMGB1P9-201ENST00000429856 TKTL2Q9H0I9 626 aa3.07□□□□□ -1.92
HMGB1P9-201ENST00000429856 FBRSL1Q9HCM7 1045 aaKnown RBP3.07□□□□□ -1.92
HMGB1P9-201ENST00000429856 MRPL15Q9P015 296 aaKnown RBP3.07□□□□□ -1.92
HMGB1P9-201ENST00000429856 SEL1LQ9UBV2 794 aa3.07□□□□□ -1.92
HMGB1P9-201ENST00000429856 FBXL17Q9UF56 701 aa3.07□□□□□ -1.92
HMGB1P9-201ENST00000429856 CNOT8Q9UFF9 292 aaKnown RBP3.07□□□□□ -1.92
HMGB1P9-201ENST00000429856 NENFQ9UMX5 172 aa3.07□□□□□ -1.92
HMGB1P9-201ENST00000429856 TRBV5-7A0A0A0MS05 114 aa3.06□□□□□ -1.92
HMGB1P9-201ENST00000429856 OR2A25A4D2G3 310 aa3.06□□□□□ -1.92
HMGB1P9-201ENST00000429856 CD8B2A6NJW9 211 aa3.06□□□□□ -1.92
HMGB1P9-201ENST00000429856 A6NNC1 897 aa3.06□□□□□ -1.92
HMGB1P9-201ENST00000429856 A8MXE2 369 aa3.06□□□□□ -1.92
HMGB1P9-201ENST00000429856 ERVV-2B6SEH9 535 aa3.06□□□□□ -1.92
HMGB1P9-201ENST00000429856 CHL1O00533 1208 aa3.06□□□□□ -1.92
HMGB1P9-201ENST00000429856 CTDSP2O14595 271 aa3.06□□□□□ -1.92
HMGB1P9-201ENST00000429856 ADAMDEC1O15204 470 aa3.06□□□□□ -1.92
HMGB1P9-201ENST00000429856 PAPSS1O43252 624 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P9-201ENST00000429856 STRNO43815 780 aa3.06□□□□□ -1.92
HMGB1P9-201ENST00000429856 HBP1O60381 514 aa3.06□□□□□ -1.92
HMGB1P9-201ENST00000429856 CRYABP02511 175 aaKnown RBP3.06□□□□□ -1.92
HMGB1P9-201ENST00000429856 AFPP02771 609 aaKnown RBP3.06□□□□□ -1.92
HMGB1P9-201ENST00000429856 HEXAP06865 529 aa3.06□□□□□ -1.92
HMGB1P9-201ENST00000429856 FGF2P09038 288 aa3.06□□□□□ -1.92
HMGB1P9-201ENST00000429856 IL7RP16871 459 aa3.06□□□□□ -1.92
HMGB1P9-201ENST00000429856 TNFRSF1BP20333 461 aa3.06□□□□□ -1.92
HMGB1P9-201ENST00000429856 KLRC2P26717 231 aa3.06□□□□□ -1.92
HMGB1P9-201ENST00000429856 TNNT3P45378 269 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P9-201ENST00000429856 SLC15A1P46059 708 aa3.06□□□□□ -1.92
HMGB1P9-201ENST00000429856 RASSF2P50749 326 aa3.06□□□□□ -1.92
HMGB1P9-201ENST00000429856 CLCN3P51790 818 aa3.06□□□□□ -1.92
HMGB1P9-201ENST00000429856 PMS2P54278 862 aa3.06□□□□□ -1.92
HMGB1P9-201ENST00000429856 RAD23AP54725 363 aa3.06□□□□□ -1.92
HMGB1P9-201ENST00000429856 CLDN2P57739 230 aa3.06□□□□□ -1.92
HMGB1P9-201ENST00000429856 CYP4A11Q02928 519 aa3.06□□□□□ -1.92
HMGB1P9-201ENST00000429856 AIMP1Q12904 312 aaKnown RBP3.06□□□□□ -1.92
HMGB1P9-201ENST00000429856 CSTF3Q12996 717 aaKnown RBP3.06□□□□□ -1.92
HMGB1P9-201ENST00000429856 PPP2R5CQ13362 524 aa3.06□□□□□ -1.92
HMGB1P9-201ENST00000429856 TNFAIP1Q13829 316 aa3.06□□□□□ -1.92
HMGB1P9-201ENST00000429856 FGFBP1Q14512 234 aa3.06□□□□□ -1.92
HMGB1P9-201ENST00000429856 RNPS1Q15287 305 aaKnown RBP3.06□□□□□ -1.92
HMGB1P9-201ENST00000429856 CXorf66Q5JRM2 361 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P9-201ENST00000429856 KRBOX4Q5JUW0 171 aa3.06□□□□□ -1.92
HMGB1P9-201ENST00000429856 ENTPD8Q5MY95 495 aa3.06□□□□□ -1.92
HMGB1P9-201ENST00000429856 Q5PR19 223 aa3.06□□□□□ -1.92
HMGB1P9-201ENST00000429856 TBC1D9BQ66K14 1250 aa3.06□□□□□ -1.92
HMGB1P9-201ENST00000429856 TXNDC8Q6A555 127 aa3.06□□□□□ -1.92
HMGB1P9-201ENST00000429856 LRRC8EQ6NSJ5 796 aa3.06□□□□□ -1.92
HMGB1P9-201ENST00000429856 HMBOX1Q6NT76 420 aa3.06□□□□□ -1.92
HMGB1P9-201ENST00000429856 DCLRE1AQ6PJP8 1040 aa3.06□□□□□ -1.92
HMGB1P9-201ENST00000429856 TSSK4Q6SA08 328 aa3.06□□□□□ -1.92
HMGB1P9-201ENST00000429856 PARM1Q6UWI2 310 aa3.06□□□□□ -1.92
HMGB1P9-201ENST00000429856 CFAP77Q6ZQR2 320 aa3.06□□□□□ -1.92
HMGB1P9-201ENST00000429856 FAM83HQ6ZRV2 1179 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P9-201ENST00000429856 GET4Q7L5D6 327 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P9-201ENST00000429856 SLFN11Q7Z7L1 901 aa3.06□□□□□ -1.92
HMGB1P9-201ENST00000429856 GPAT4Q86UL3 456 aa3.06□□□□□ -1.92
HMGB1P9-201ENST00000429856 TRIM74Q86UV6 250 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms