RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 WASH4PA8MWX3 477 aa18.37■□□□□ 0.53
UPK3BP1-201ENST00000428678 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.37■□□□□ 0.53
UPK3BP1-201ENST00000428678 FGF10O15520 208 aaPredicted RBP18.37■□□□□ 0.53
UPK3BP1-201ENST00000428678 TEX33O43247 280 aa18.37■□□□□ 0.53
UPK3BP1-201ENST00000428678 CCP110O43303 1012 aa18.37■□□□□ 0.53
UPK3BP1-201ENST00000428678 ALDH4A1P30038 563 aa18.37■□□□□ 0.53
UPK3BP1-201ENST00000428678 RGRP47804 291 aa18.37■□□□□ 0.53
UPK3BP1-201ENST00000428678 ATP1A2P50993 1020 aa18.37■□□□□ 0.53
UPK3BP1-201ENST00000428678 OR1D5P58170 312 aa18.37■□□□□ 0.53
UPK3BP1-201ENST00000428678 RALGDSQ12967 914 aa18.37■□□□□ 0.53
UPK3BP1-201ENST00000428678 PTP4A2Q12974 167 aa18.37■□□□□ 0.53
UPK3BP1-201ENST00000428678 LIPIQ6XZB0 460 aa18.37■□□□□ 0.53
UPK3BP1-201ENST00000428678 SRLQ86TD4 932 aa18.37■□□□□ 0.53
UPK3BP1-201ENST00000428678 RCBTB1Q8NDN9 531 aa18.37■□□□□ 0.53
UPK3BP1-201ENST00000428678 CELF6Q96J87 481 aaKnown RBP18.37■□□□□ 0.53
UPK3BP1-201ENST00000428678 NUDT22Q9BRQ3 303 aa18.37■□□□□ 0.53
UPK3BP1-201ENST00000428678 LGR4Q9BXB1 951 aa18.37■□□□□ 0.53
UPK3BP1-201ENST00000428678 GANQ9H2C0 597 aa18.37■□□□□ 0.53
UPK3BP1-201ENST00000428678 FZD10Q9ULW2 581 aa18.37■□□□□ 0.53
UPK3BP1-201ENST00000428678 TEX15Q9BXT5 2789 aa18.36■□□□□ 0.53
UPK3BP1-201ENST00000428678 PRSS38A1L453 326 aa18.36■□□□□ 0.53
UPK3BP1-201ENST00000428678 B4GAT1O43505 415 aa18.36■□□□□ 0.53
UPK3BP1-201ENST00000428678 ZFC3H1O60293 1989 aaKnown RBP18.36■□□□□ 0.53
UPK3BP1-201ENST00000428678 PRAMEF11O60813 436 aa18.36■□□□□ 0.53
UPK3BP1-201ENST00000428678 HOXC4P09017 264 aaPredicted RBP18.36■□□□□ 0.53
UPK3BP1-201ENST00000428678 SOX5P35711 763 aa18.36■□□□□ 0.53
UPK3BP1-201ENST00000428678 BIRC2Q13490 618 aa18.36■□□□□ 0.53
UPK3BP1-201ENST00000428678 TSR1Q2NL82 804 aaKnown RBP18.36■□□□□ 0.53
UPK3BP1-201ENST00000428678 DPCR1Q3MIW9 517 aa18.36■□□□□ 0.53
UPK3BP1-201ENST00000428678 TSEN2Q8NCE0 465 aaKnown RBP18.36■□□□□ 0.53
UPK3BP1-201ENST00000428678 B3GNT4Q9C0J1 378 aa18.36■□□□□ 0.53
UPK3BP1-201ENST00000428678 LRRC19Q9H756 370 aa18.36■□□□□ 0.53
UPK3BP1-201ENST00000428678 CARS2Q9HA77 564 aaKnown RBP18.36■□□□□ 0.53
UPK3BP1-201ENST00000428678 SPATS2LQ9NUQ6 558 aaKnown RBP18.36■□□□□ 0.53
UPK3BP1-201ENST00000428678 TAB2Q9NYJ8 693 aa18.36■□□□□ 0.53
UPK3BP1-201ENST00000428678 USP9YO00507 2555 aaPredicted RBP18.36■□□□□ 0.53
UPK3BP1-201ENST00000428678 SPTAN1Q13813 2472 aaKnown RBP18.35■□□□□ 0.53
UPK3BP1-201ENST00000428678 RELNP78509 3460 aa18.35■□□□□ 0.53
UPK3BP1-201ENST00000428678 ANKRD62A6NC57 917 aa18.35■□□□□ 0.53
UPK3BP1-201ENST00000428678 A8MX80 341 aa18.35■□□□□ 0.53
UPK3BP1-201ENST00000428678 PDE2AO00408 941 aaPredicted RBP18.35■□□□□ 0.53
UPK3BP1-201ENST00000428678 HGSO14964 777 aaPredicted RBP18.35■□□□□ 0.53
UPK3BP1-201ENST00000428678 PALMO75781 387 aa18.35■□□□□ 0.53
UPK3BP1-201ENST00000428678 CALB1P05937 261 aa18.35■□□□□ 0.53
UPK3BP1-201ENST00000428678 UNGP13051 313 aaPredicted RBP18.35■□□□□ 0.53
UPK3BP1-201ENST00000428678 TRIM23P36406 574 aa18.35■□□□□ 0.53
UPK3BP1-201ENST00000428678 STAT1P42224 750 aa18.35■□□□□ 0.53
UPK3BP1-201ENST00000428678 KLK7P49862 253 aa18.35■□□□□ 0.53
UPK3BP1-201ENST00000428678 ZNF143P52747 638 aaPredicted RBP18.35■□□□□ 0.53
UPK3BP1-201ENST00000428678 GSCP56915 257 aaPredicted RBP18.35■□□□□ 0.53
UPK3BP1-201ENST00000428678 TPI1P60174 286 aa18.35■□□□□ 0.53
UPK3BP1-201ENST00000428678 POLR2FP61218 127 aaKnown RBP18.35■□□□□ 0.53
UPK3BP1-201ENST00000428678 UBE2HP62256 183 aa18.35■□□□□ 0.53
UPK3BP1-201ENST00000428678 BCL2L1Q07817 233 aa18.35■□□□□ 0.53
UPK3BP1-201ENST00000428678 ACOX1Q15067 660 aa18.35■□□□□ 0.53
UPK3BP1-201ENST00000428678 TCP11X2Q5H9J9 407 aa18.35■□□□□ 0.53
UPK3BP1-201ENST00000428678 PNCKQ6P2M8 343 aa18.35■□□□□ 0.53
UPK3BP1-201ENST00000428678 BORAQ6PGQ7 559 aa18.35■□□□□ 0.53
UPK3BP1-201ENST00000428678 DPPA4Q7L190 304 aa18.35■□□□□ 0.53
UPK3BP1-201ENST00000428678 PTRH1Q86Y79 214 aaKnown RBP18.35■□□□□ 0.53
UPK3BP1-201ENST00000428678 PELI3Q8N2H9 469 aa18.35■□□□□ 0.53
UPK3BP1-201ENST00000428678 C3orf20Q8ND61 904 aa18.35■□□□□ 0.53
UPK3BP1-201ENST00000428678 ZDHHC1Q8WTX9 485 aa18.35■□□□□ 0.53
UPK3BP1-201ENST00000428678 CCDC74BQ96LY2 380 aa18.35■□□□□ 0.53
UPK3BP1-201ENST00000428678 TAAR9Q96RI9 348 aa18.35■□□□□ 0.53
UPK3BP1-201ENST00000428678 PCDHB18PQ96TA0 734 aa18.35■□□□□ 0.53
UPK3BP1-201ENST00000428678 SLC12A9Q9BXP2 914 aa18.35■□□□□ 0.53
UPK3BP1-201ENST00000428678 ADNPQ9H2P0 1102 aa18.35■□□□□ 0.53
UPK3BP1-201ENST00000428678 NLRC4Q9NPP4 1024 aa18.35■□□□□ 0.53
UPK3BP1-201ENST00000428678 FAM207AQ9NSI2 230 aaPredicted RBP18.35■□□□□ 0.53
UPK3BP1-201ENST00000428678 SAMSN1Q9NSI8 373 aaKnown RBP18.35■□□□□ 0.53
UPK3BP1-201ENST00000428678 DONSONQ9NYP3 566 aa18.35■□□□□ 0.53
UPK3BP1-201ENST00000428678 SEPT3Q9UH03 358 aa18.35■□□□□ 0.53
UPK3BP1-201ENST00000428678 IGHV5-10-1A0A0J9YXX1 117 aa18.34■□□□□ 0.53
UPK3BP1-201ENST00000428678 SIGLEC16A6NMB1 481 aa18.34■□□□□ 0.53
UPK3BP1-201ENST00000428678 ZW10O43264 779 aa18.34■□□□□ 0.53
UPK3BP1-201ENST00000428678 CCNB1P14635 433 aa18.34■□□□□ 0.53
UPK3BP1-201ENST00000428678 ERCC5P28715 1186 aaPredicted RBP18.34■□□□□ 0.53
UPK3BP1-201ENST00000428678 CSNK1DP48730 415 aa18.34■□□□□ 0.53
UPK3BP1-201ENST00000428678 PAPOLAP51003 745 aaKnown RBP18.34■□□□□ 0.53
UPK3BP1-201ENST00000428678 NDST2P52849 883 aa18.34■□□□□ 0.53
UPK3BP1-201ENST00000428678 POLR2LP62875 67 aaKnown RBP18.34■□□□□ 0.53
UPK3BP1-201ENST00000428678 ILF3Q12906 894 aaKnown RBP eCLIP18.34■□□□□ 0.53
UPK3BP1-201ENST00000428678 CLEC16AQ2KHT3 1053 aa18.34■□□□□ 0.53
UPK3BP1-201ENST00000428678 AFMIDQ63HM1 303 aa18.34■□□□□ 0.53
UPK3BP1-201ENST00000428678 DNAJC24Q6P3W2 148 aa18.34■□□□□ 0.53
UPK3BP1-201ENST00000428678 ZNF438Q7Z4V0 828 aa18.34■□□□□ 0.53
UPK3BP1-201ENST00000428678 IL22RA1Q8N6P7 574 aa18.34■□□□□ 0.53
UPK3BP1-201ENST00000428678 GPBAR1Q8TDU6 330 aa18.34■□□□□ 0.53
UPK3BP1-201ENST00000428678 NKD1Q969G9 470 aa18.34■□□□□ 0.53
UPK3BP1-201ENST00000428678 PMEPA1Q969W9 287 aa18.34■□□□□ 0.53
UPK3BP1-201ENST00000428678 ECHDC3Q96DC8 303 aa18.34■□□□□ 0.53
UPK3BP1-201ENST00000428678 MCEEQ96PE7 176 aa18.34■□□□□ 0.53
UPK3BP1-201ENST00000428678 CINPQ9BW66 212 aaPredicted RBP18.34■□□□□ 0.53
UPK3BP1-201ENST00000428678 GSDMCQ9BYG8 508 aa18.34■□□□□ 0.53
UPK3BP1-201ENST00000428678 SEPT11Q9NVA2 429 aaKnown RBP18.34■□□□□ 0.53
UPK3BP1-201ENST00000428678 DACH1Q9UI36 760 aa18.34■□□□□ 0.53
UPK3BP1-201ENST00000428678 ARHGAP42A6NI28 874 aa18.33■□□□□ 0.52
UPK3BP1-201ENST00000428678 ECEL1O95672 775 aa18.33■□□□□ 0.52
UPK3BP1-201ENST00000428678 FGF1P05230 155 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms