RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 SHROOM3Q8TF72 1996 aa7.93□□□□□ -1.14
HMGA1P4-201ENST00000428643 A0A0U1RQS6 177 aa7.93□□□□□ -1.14
HMGA1P4-201ENST00000428643 CCDC151A5D8V7 595 aa7.93□□□□□ -1.14
HMGA1P4-201ENST00000428643 PRR23AA6NEV1 266 aa7.93□□□□□ -1.14
HMGA1P4-201ENST00000428643 C2orf81A6NN90 581 aa7.93□□□□□ -1.14
HMGA1P4-201ENST00000428643 E7ESA3 106 aa7.93□□□□□ -1.14
HMGA1P4-201ENST00000428643 BUD23O43709 281 aaKnown RBP7.93□□□□□ -1.14
HMGA1P4-201ENST00000428643 ACSL3O95573 720 aa7.93□□□□□ -1.14
HMGA1P4-201ENST00000428643 POLBP06746 335 aa7.93□□□□□ -1.14
HMGA1P4-201ENST00000428643 ELFN1P0C7U0 828 aa7.93□□□□□ -1.14
HMGA1P4-201ENST00000428643 AOC1P19801 751 aa7.93□□□□□ -1.14
HMGA1P4-201ENST00000428643 ADRA1DP25100 572 aa7.93□□□□□ -1.14
HMGA1P4-201ENST00000428643 DRD3P35462 400 aa7.93□□□□□ -1.14
HMGA1P4-201ENST00000428643 MMP12P39900 470 aa7.93□□□□□ -1.14
HMGA1P4-201ENST00000428643 MAGEA4P43358 317 aa7.93□□□□□ -1.14
HMGA1P4-201ENST00000428643 MAGEA9P43362 315 aa7.93□□□□□ -1.14
HMGA1P4-201ENST00000428643 CCR3P51677 355 aa7.93□□□□□ -1.14
HMGA1P4-201ENST00000428643 PMS2P54278 862 aa7.93□□□□□ -1.14
HMGA1P4-201ENST00000428643 ELP6Q0PNE2 266 aa7.93□□□□□ -1.14
HMGA1P4-201ENST00000428643 ARHGEF7Q14155 803 aa7.93□□□□□ -1.14
HMGA1P4-201ENST00000428643 TAF1AQ15573 450 aaPredicted RBP7.93□□□□□ -1.14
HMGA1P4-201ENST00000428643 SMAD1Q15797 465 aaKnown RBP7.93□□□□□ -1.14
HMGA1P4-201ENST00000428643 CNGA3Q16281 694 aa7.93□□□□□ -1.14
HMGA1P4-201ENST00000428643 PCID2Q5JVF3 399 aa7.93□□□□□ -1.14
HMGA1P4-201ENST00000428643 PIP5KL1Q5T9C9 394 aa7.93□□□□□ -1.14
HMGA1P4-201ENST00000428643 AGBL4Q5VU57 503 aa7.93□□□□□ -1.14
HMGA1P4-201ENST00000428643 NLRP9Q7RTR0 991 aa7.93□□□□□ -1.14
HMGA1P4-201ENST00000428643 TSPAN33Q86UF1 283 aa7.93□□□□□ -1.14
HMGA1P4-201ENST00000428643 PALM2Q8IXS6 379 aa7.93□□□□□ -1.14
HMGA1P4-201ENST00000428643 TTC30BQ8N4P2 665 aa7.93□□□□□ -1.14
HMGA1P4-201ENST00000428643 OTUD6BQ8N6M0 293 aa7.93□□□□□ -1.14
HMGA1P4-201ENST00000428643 MDGA1Q8NFP4 955 aa7.93□□□□□ -1.14
HMGA1P4-201ENST00000428643 PTCD2Q8WV60 388 aaKnown RBP7.93□□□□□ -1.14
HMGA1P4-201ENST00000428643 RAB7BQ96AH8 199 aa7.93□□□□□ -1.14
HMGA1P4-201ENST00000428643 SCRN2Q96FV2 425 aa7.93□□□□□ -1.14
HMGA1P4-201ENST00000428643 SIGLEC10Q96LC7 697 aa7.93□□□□□ -1.14
HMGA1P4-201ENST00000428643 TTC25Q96NG3 672 aa7.93□□□□□ -1.14
HMGA1P4-201ENST00000428643 RANBP9Q96S59 729 aa7.93□□□□□ -1.14
HMGA1P4-201ENST00000428643 EBNA1BP2Q99848 306 aaKnown RBP7.93□□□□□ -1.14
HMGA1P4-201ENST00000428643 WDR83Q9BRX9 315 aaKnown RBP7.93□□□□□ -1.14
HMGA1P4-201ENST00000428643 TRIM56Q9BRZ2 755 aaKnown RBP7.93□□□□□ -1.14
HMGA1P4-201ENST00000428643 NAT9Q9BTE0 207 aa7.93□□□□□ -1.14
HMGA1P4-201ENST00000428643 TRABDQ9H4I3 376 aa7.93□□□□□ -1.14
HMGA1P4-201ENST00000428643 VPS37BQ9H9H4 285 aa7.93□□□□□ -1.14
HMGA1P4-201ENST00000428643 ZFYVE1Q9HBF4 777 aa7.93□□□□□ -1.14
HMGA1P4-201ENST00000428643 MAGEE1Q9HCI5 957 aa7.93□□□□□ -1.14
HMGA1P4-201ENST00000428643 GGT7Q9UJ14 662 aa7.93□□□□□ -1.14
HMGA1P4-201ENST00000428643 FZD4Q9ULV1 537 aa7.93□□□□□ -1.14
HMGA1P4-201ENST00000428643 SOX13Q9UN79 622 aa7.93□□□□□ -1.14
HMGA1P4-201ENST00000428643 PKP3Q9Y446 797 aa7.93□□□□□ -1.14
HMGA1P4-201ENST00000428643 RPS6KL1Q9Y6S9 549 aa7.93□□□□□ -1.14
HMGA1P4-201ENST00000428643 MIA3Q5JRA6 1907 aa7.92□□□□□ -1.14
HMGA1P4-201ENST00000428643 TCF20Q9UGU0 1960 aaKnown RBP7.92□□□□□ -1.14
HMGA1P4-201ENST00000428643 NUP205Q92621 2012 aa7.92□□□□□ -1.14
HMGA1P4-201ENST00000428643 MAGEB16A2A368 324 aa7.92□□□□□ -1.14
HMGA1P4-201ENST00000428643 FAM47DPA6NHR8 397 aa7.92□□□□□ -1.14
HMGA1P4-201ENST00000428643 GOLGA8CPA6NN73 597 aa7.92□□□□□ -1.14
HMGA1P4-201ENST00000428643 CCL22O00626 93 aa7.92□□□□□ -1.14
HMGA1P4-201ENST00000428643 AURKAO14965 403 aa7.92□□□□□ -1.14
HMGA1P4-201ENST00000428643 AREL1O15033 823 aa7.92□□□□□ -1.14
HMGA1P4-201ENST00000428643 STX7O15400 261 aaKnown RBP7.92□□□□□ -1.14
HMGA1P4-201ENST00000428643 SLC7A4O43246 635 aa7.92□□□□□ -1.14
HMGA1P4-201ENST00000428643 SPINT1O43278 529 aa7.92□□□□□ -1.14
HMGA1P4-201ENST00000428643 LDB2O43679 373 aa7.92□□□□□ -1.14
HMGA1P4-201ENST00000428643 PI15O43692 258 aa7.92□□□□□ -1.14
HMGA1P4-201ENST00000428643 PCDH8O95206 1070 aa7.92□□□□□ -1.14
HMGA1P4-201ENST00000428643 CLDN7O95471 211 aa7.92□□□□□ -1.14
HMGA1P4-201ENST00000428643 TTC4O95801 387 aa7.92□□□□□ -1.14
HMGA1P4-201ENST00000428643 PAMP19021 973 aa7.92□□□□□ -1.14
HMGA1P4-201ENST00000428643 LPOP22079 712 aaPredicted RBP7.92□□□□□ -1.14
HMGA1P4-201ENST00000428643 LHCGRP22888 699 aa7.92□□□□□ -1.14
HMGA1P4-201ENST00000428643 NMBRP28336 390 aa7.92□□□□□ -1.14
HMGA1P4-201ENST00000428643 CXCL12P48061 93 aa7.92□□□□□ -1.14
HMGA1P4-201ENST00000428643 PXNP49023 591 aaPredicted RBP7.92□□□□□ -1.14
HMGA1P4-201ENST00000428643 LIG3P49916 1009 aa7.92□□□□□ -1.14
HMGA1P4-201ENST00000428643 TPMTP51580 245 aa7.92□□□□□ -1.14
HMGA1P4-201ENST00000428643 ZNF140P52738 457 aaPredicted RBP7.92□□□□□ -1.14
HMGA1P4-201ENST00000428643 STC1P52823 247 aa7.92□□□□□ -1.14
HMGA1P4-201ENST00000428643 ADPRHP54922 357 aa7.92□□□□□ -1.14
HMGA1P4-201ENST00000428643 TMPRSS15P98073 1019 aa7.92□□□□□ -1.14
HMGA1P4-201ENST00000428643 PDE1BQ01064 536 aa7.92□□□□□ -1.14
HMGA1P4-201ENST00000428643 RALGDSQ12967 914 aa7.92□□□□□ -1.14
HMGA1P4-201ENST00000428643 CRYMQ14894 314 aa7.92□□□□□ -1.14
HMGA1P4-201ENST00000428643 ACOX1Q15067 660 aa7.92□□□□□ -1.14
HMGA1P4-201ENST00000428643 KYNUQ16719 465 aa7.92□□□□□ -1.14
HMGA1P4-201ENST00000428643 TSTD2Q5T7W7 516 aa7.92□□□□□ -1.14
HMGA1P4-201ENST00000428643 ARMC3Q5W041 872 aa7.92□□□□□ -1.14
HMGA1P4-201ENST00000428643 ALS2CLQ60I27 953 aa7.92□□□□□ -1.14
HMGA1P4-201ENST00000428643 FBXO38Q6PIJ6 1188 aa7.92□□□□□ -1.14
HMGA1P4-201ENST00000428643 CRTC1Q6UUV9 634 aa7.92□□□□□ -1.14
HMGA1P4-201ENST00000428643 CES3Q6UWW8 571 aa7.92□□□□□ -1.14
HMGA1P4-201ENST00000428643 UNC5AQ6ZN44 842 aa7.92□□□□□ -1.14
HMGA1P4-201ENST00000428643 USP30Q70CQ3 517 aa7.92□□□□□ -1.14
HMGA1P4-201ENST00000428643 TRMT10CQ7L0Y3 403 aaKnown RBP7.92□□□□□ -1.14
HMGA1P4-201ENST00000428643 KBTBD6Q86V97 674 aa7.92□□□□□ -1.14
HMGA1P4-201ENST00000428643 CCNJLQ8IV13 435 aa7.92□□□□□ -1.14
HMGA1P4-201ENST00000428643 IGDCC3Q8IVU1 814 aa7.92□□□□□ -1.14
HMGA1P4-201ENST00000428643 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.92□□□□□ -1.14
HMGA1P4-201ENST00000428643 OR14C36Q8NHC7 312 aa7.92□□□□□ -1.14
HMGA1P4-201ENST00000428643 BRSK1Q8TDC3 778 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms