RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 KLK10O43240 276 aa15.57■□□□□ 0.08
SEC13-210ENST00000428626 HTRA2O43464 458 aaPredicted RBP15.57■□□□□ 0.08
SEC13-210ENST00000428626 NOBOXO60393 691 aa15.57■□□□□ 0.08
SEC13-210ENST00000428626 MAFKO60675 156 aa15.57■□□□□ 0.08
SEC13-210ENST00000428626 FUCA1P04066 466 aa15.57■□□□□ 0.08
SEC13-210ENST00000428626 ALPIP09923 528 aa15.57■□□□□ 0.08
SEC13-210ENST00000428626 ELFN1P0C7U0 828 aa15.57■□□□□ 0.08
SEC13-210ENST00000428626 RARAP10276 462 aa15.57■□□□□ 0.08
SEC13-210ENST00000428626 PCK1P35558 622 aa15.57■□□□□ 0.08
SEC13-210ENST00000428626 AP1S1P61966 158 aa15.57■□□□□ 0.08
SEC13-210ENST00000428626 TRAF2Q12933 501 aa15.57■□□□□ 0.08
SEC13-210ENST00000428626 CNGA3Q16281 694 aa15.57■□□□□ 0.08
SEC13-210ENST00000428626 ARHGAP40Q5TG30 622 aa15.57■□□□□ 0.08
SEC13-210ENST00000428626 TMCO4Q5TGY1 634 aa15.57■□□□□ 0.08
SEC13-210ENST00000428626 CAVIN1Q6NZI2 390 aaKnown RBP15.57■□□□□ 0.08
SEC13-210ENST00000428626 CPNE8Q86YQ8 564 aa15.57■□□□□ 0.08
SEC13-210ENST00000428626 OR56A4Q8NGH8 313 aa15.57■□□□□ 0.08
SEC13-210ENST00000428626 SPOCK2Q92563 424 aa15.57■□□□□ 0.08
SEC13-210ENST00000428626 HSPH1Q92598 858 aa15.57■□□□□ 0.08
SEC13-210ENST00000428626 GRAMD1AQ96CP6 724 aa15.57■□□□□ 0.08
SEC13-210ENST00000428626 COQ10AQ96MF6 247 aa15.57■□□□□ 0.08
SEC13-210ENST00000428626 CSPG4P5Q96PW8 444 aa15.57■□□□□ 0.08
SEC13-210ENST00000428626 FOXP3Q9BZS1 431 aa15.57■□□□□ 0.08
SEC13-210ENST00000428626 ZWILCHQ9H900 591 aa15.57■□□□□ 0.08
SEC13-210ENST00000428626 SEPT3Q9UH03 358 aa15.57■□□□□ 0.08
SEC13-210ENST00000428626 SMTNL1A8MU46 457 aa15.56■□□□□ 0.08
SEC13-210ENST00000428626 TK2O00142 265 aa15.56■□□□□ 0.08
SEC13-210ENST00000428626 TNFP01375 233 aa15.56■□□□□ 0.08
SEC13-210ENST00000428626 RPLP0P05388 317 aaKnown RBP15.56■□□□□ 0.08
SEC13-210ENST00000428626 LHCGRP22888 699 aa15.56■□□□□ 0.08
SEC13-210ENST00000428626 PBX1P40424 430 aa15.56■□□□□ 0.08
SEC13-210ENST00000428626 MAXP61244 160 aa15.56■□□□□ 0.08
SEC13-210ENST00000428626 SLC25A11Q02978 314 aaKnown RBP15.56■□□□□ 0.08
SEC13-210ENST00000428626 IHHQ14623 411 aa15.56■□□□□ 0.08
SEC13-210ENST00000428626 FILIP1LQ4L180 1135 aa15.56■□□□□ 0.08
SEC13-210ENST00000428626 PNCKQ6P2M8 343 aa15.56■□□□□ 0.08
SEC13-210ENST00000428626 OGFOD3Q6PK18 319 aa15.56■□□□□ 0.08
SEC13-210ENST00000428626 TMPRSS9Q7Z410 1059 aa15.56■□□□□ 0.08
SEC13-210ENST00000428626 CLEC14AQ86T13 490 aa15.56■□□□□ 0.08
SEC13-210ENST00000428626 GKN2Q86XP6 184 aa15.56■□□□□ 0.08
SEC13-210ENST00000428626 CBARPQ8N350 705 aaPredicted RBP15.56■□□□□ 0.08
SEC13-210ENST00000428626 WDR36Q8NI36 951 aaKnown RBP15.56■□□□□ 0.08
SEC13-210ENST00000428626 SMIM14Q96QK8 99 aa15.56■□□□□ 0.08
SEC13-210ENST00000428626 THAP2Q9H0W7 228 aa15.56■□□□□ 0.08
SEC13-210ENST00000428626 NOD2Q9HC29 1040 aa15.56■□□□□ 0.08
SEC13-210ENST00000428626 PCDH18Q9HCL0 1135 aa15.56■□□□□ 0.08
SEC13-210ENST00000428626 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.56■□□□□ 0.08
SEC13-210ENST00000428626 ST14Q9Y5Y6 855 aa15.56■□□□□ 0.08
SEC13-210ENST00000428626 SCINQ9Y6U3 715 aa15.56■□□□□ 0.08
SEC13-210ENST00000428626 PIEZO2Q9H5I5 2752 aa15.55■□□□□ 0.08
SEC13-210ENST00000428626 COL6A6A6NMZ7 2263 aa15.55■□□□□ 0.08
SEC13-210ENST00000428626 CCDC187A0A096LP49 1063 aa15.55■□□□□ 0.08
SEC13-210ENST00000428626 D6RAR5 112 aa15.55■□□□□ 0.08
SEC13-210ENST00000428626 H3BRJ5 948 aa15.55■□□□□ 0.08
SEC13-210ENST00000428626 TNFSF15O95150 251 aa15.55■□□□□ 0.08
SEC13-210ENST00000428626 HOXC4P09017 264 aaPredicted RBP15.55■□□□□ 0.08
SEC13-210ENST00000428626 MYBL1P10243 752 aa15.55■□□□□ 0.08
SEC13-210ENST00000428626 HGFP14210 728 aa15.55■□□□□ 0.08
SEC13-210ENST00000428626 IL4RP24394 825 aa15.55■□□□□ 0.08
SEC13-210ENST00000428626 RBMS1P29558 406 aaKnown RBP15.55■□□□□ 0.08
SEC13-210ENST00000428626 ZNF135P52742 658 aaPredicted RBP15.55■□□□□ 0.08
SEC13-210ENST00000428626 TMPRSS3P57727 454 aa15.55■□□□□ 0.08
SEC13-210ENST00000428626 ACOX1Q15067 660 aa15.55■□□□□ 0.08
SEC13-210ENST00000428626 FIGNQ5HY92 759 aa15.55■□□□□ 0.08
SEC13-210ENST00000428626 RFLNAQ6ZTI6 216 aa15.55■□□□□ 0.08
SEC13-210ENST00000428626 HSD11B1LQ7Z5J1 315 aa15.55■□□□□ 0.08
SEC13-210ENST00000428626 ZNF843Q8N446 348 aa15.55■□□□□ 0.08
SEC13-210ENST00000428626 LZTR1Q8N653 840 aa15.55■□□□□ 0.08
SEC13-210ENST00000428626 WDR48Q8TAF3 677 aa15.55■□□□□ 0.08
SEC13-210ENST00000428626 SCG3Q8WXD2 468 aaKnown RBP15.55■□□□□ 0.08
SEC13-210ENST00000428626 LIN37Q96GY3 246 aaPredicted RBP15.55■□□□□ 0.08
SEC13-210ENST00000428626 ZNF599Q96NL3 588 aa15.55■□□□□ 0.08
SEC13-210ENST00000428626 GFM1Q96RP9 751 aaKnown RBP15.55■□□□□ 0.08
SEC13-210ENST00000428626 NUDCD1Q96RS6 583 aa15.55■□□□□ 0.08
SEC13-210ENST00000428626 MGME1Q9BQP7 344 aa15.55■□□□□ 0.08
SEC13-210ENST00000428626 DPH1Q9BZG8 443 aa15.55■□□□□ 0.08
SEC13-210ENST00000428626 CYP4F12Q9HCS2 524 aa15.55■□□□□ 0.08
SEC13-210ENST00000428626 ATXN7L1Q9ULK2 861 aaPredicted RBP15.55■□□□□ 0.08
SEC13-210ENST00000428626 NPIPB15A6NHN6 443 aaPredicted RBP15.54■□□□□ 0.08
SEC13-210ENST00000428626 CACNB4O00305 520 aaPredicted RBP15.54■□□□□ 0.08
SEC13-210ENST00000428626 HEXIM1O94992 359 aaKnown RBP15.54■□□□□ 0.08
SEC13-210ENST00000428626 CD48P09326 243 aa15.54■□□□□ 0.08
SEC13-210ENST00000428626 ETV3P41162 512 aa15.54■□□□□ 0.08
SEC13-210ENST00000428626 RENBPP51606 427 aa15.54■□□□□ 0.08
SEC13-210ENST00000428626 POLR2LP62875 67 aaKnown RBP15.54■□□□□ 0.08
SEC13-210ENST00000428626 MMRN1Q13201 1228 aa15.54■□□□□ 0.08
SEC13-210ENST00000428626 CLN3Q13286 438 aa15.54■□□□□ 0.08
SEC13-210ENST00000428626 ZNF235Q14590 738 aa15.54■□□□□ 0.08
SEC13-210ENST00000428626 BOLA3Q53S33 107 aa15.54■□□□□ 0.08
SEC13-210ENST00000428626 CERCAMQ5T4B2 595 aa15.54■□□□□ 0.08
SEC13-210ENST00000428626 DENND2CQ68D51 928 aa15.54■□□□□ 0.08
SEC13-210ENST00000428626 TMCO3Q6UWJ1 677 aa15.54■□□□□ 0.08
SEC13-210ENST00000428626 TAF8Q7Z7C8 310 aa15.54■□□□□ 0.08
SEC13-210ENST00000428626 TSPAN33Q86UF1 283 aa15.54■□□□□ 0.08
SEC13-210ENST00000428626 NRROSQ86YC3 692 aa15.54■□□□□ 0.08
SEC13-210ENST00000428626 Q8N9G6 341 aaPredicted RBP15.54■□□□□ 0.08
SEC13-210ENST00000428626 LSM14AQ8ND56 463 aaKnown RBP15.54■□□□□ 0.08
SEC13-210ENST00000428626 FAM46DQ8NEK8 389 aa15.54■□□□□ 0.08
SEC13-210ENST00000428626 ATL2Q8NHH9 583 aa15.54■□□□□ 0.08
SEC13-210ENST00000428626 PDCD6IPQ8WUM4 868 aaKnown RBP15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms