RNA–Protein interactions for RNA: ENST00000428101.6

LMO1-202, Transcript of LIM domain only 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LMO1, Length 1,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-202ENST00000428101 RCOR3Q9P2K3 495 aaPredicted RBP27.32■■□□□ 1.96
LMO1-202ENST00000428101 BPTFQ12830 3046 aa27.31■■□□□ 1.96
LMO1-202ENST00000428101 A0A1W2PNU3 283 aaPredicted RBP27.31■■□□□ 1.96
LMO1-202ENST00000428101 DXOO77932 396 aaKnown RBP27.31■■□□□ 1.96
LMO1-202ENST00000428101 TNFP01375 233 aa27.31■■□□□ 1.96
LMO1-202ENST00000428101 HOXC4P09017 264 aaPredicted RBP27.31■■□□□ 1.96
LMO1-202ENST00000428101 SERPINB6P35237 376 aa27.31■■□□□ 1.96
LMO1-202ENST00000428101 TRAF2Q12933 501 aa27.31■■□□□ 1.96
LMO1-202ENST00000428101 ZSCAN23Q3MJ62 389 aa27.31■■□□□ 1.96
LMO1-202ENST00000428101 KYQ8NBH2 561 aa27.31■■□□□ 1.96
LMO1-202ENST00000428101 PDCD6IPQ8WUM4 868 aaKnown RBP27.31■■□□□ 1.96
LMO1-202ENST00000428101 SCG3Q8WXD2 468 aaKnown RBP27.31■■□□□ 1.96
LMO1-202ENST00000428101 OR1E3Q8WZA6 343 aa27.31■■□□□ 1.96
LMO1-202ENST00000428101 COQ10AQ96MF6 247 aa27.31■■□□□ 1.96
LMO1-202ENST00000428101 RBM15Q96T37 977 aaKnown RBP eCLIP27.31■■□□□ 1.96
LMO1-202ENST00000428101 CCDC3Q9BQI4 270 aa27.31■■□□□ 1.96
LMO1-202ENST00000428101 POLR1BQ9H9Y6 1135 aa27.31■■□□□ 1.96
LMO1-202ENST00000428101 SIRPGQ9P1W8 387 aa27.31■■□□□ 1.96
LMO1-202ENST00000428101 GULP1Q9UBP9 304 aa27.31■■□□□ 1.96
LMO1-202ENST00000428101 ENTPD2Q9Y5L3 495 aa27.31■■□□□ 1.96
LMO1-202ENST00000428101 A0A1W2PQ67 120 aa27.3■■□□□ 1.96
LMO1-202ENST00000428101 TCEA3O75764 348 aa27.3■■□□□ 1.96
LMO1-202ENST00000428101 HNRNPH3P31942 346 aaKnown RBP27.3■■□□□ 1.96
LMO1-202ENST00000428101 MMP13P45452 471 aa27.3■■□□□ 1.96
LMO1-202ENST00000428101 ACOX1Q15067 660 aa27.3■■□□□ 1.96
LMO1-202ENST00000428101 CNGA3Q16281 694 aa27.3■■□□□ 1.96
LMO1-202ENST00000428101 ATP13A4Q4VNC1 1196 aa27.3■■□□□ 1.96
LMO1-202ENST00000428101 MARC1Q5VT66 337 aa27.3■■□□□ 1.96
LMO1-202ENST00000428101 PNCKQ6P2M8 343 aa27.3■■□□□ 1.96
LMO1-202ENST00000428101 RBM44Q6ZP01 1051 aaKnown RBP27.3■■□□□ 1.96
LMO1-202ENST00000428101 GKN2Q86XP6 184 aa27.3■■□□□ 1.96
LMO1-202ENST00000428101 CBARPQ8N350 705 aaPredicted RBP27.3■■□□□ 1.96
LMO1-202ENST00000428101 TEX26Q8N6G2 289 aa27.3■■□□□ 1.96
LMO1-202ENST00000428101 OR56A4Q8NGH8 313 aa27.3■■□□□ 1.96
LMO1-202ENST00000428101 ZNF564Q8TBZ8 553 aaPredicted RBP27.3■■□□□ 1.96
LMO1-202ENST00000428101 ATXN7L3BQ96GX2 97 aa27.3■■□□□ 1.96
LMO1-202ENST00000428101 ZNF578Q96N58 590 aaPredicted RBP27.3■■□□□ 1.96
LMO1-202ENST00000428101 LGR4Q9BXB1 951 aa27.3■■□□□ 1.96
LMO1-202ENST00000428101 XPO4Q9C0E2 1151 aaKnown RBP27.3■■□□□ 1.96
LMO1-202ENST00000428101 FGF22Q9HCT0 170 aa27.3■■□□□ 1.96
LMO1-202ENST00000428101 MRPL40Q9NQ50 206 aaKnown RBP27.3■■□□□ 1.96
LMO1-202ENST00000428101 GPR34Q9UPC5 381 aa27.3■■□□□ 1.96
LMO1-202ENST00000428101 RAI2Q9Y5P3 530 aa27.3■■□□□ 1.96
LMO1-202ENST00000428101 ARHGEF17Q96PE2 2063 aaPredicted RBP27.29■■□□□ 1.96
LMO1-202ENST00000428101 CACNB4O00305 520 aaPredicted RBP27.29■■□□□ 1.96
LMO1-202ENST00000428101 CPP00450 1065 aa27.29■■□□□ 1.96
LMO1-202ENST00000428101 SSR1P43307 286 aaKnown RBP27.29■■□□□ 1.96
LMO1-202ENST00000428101 DPYSL3Q14195 570 aa27.29■■□□□ 1.96
LMO1-202ENST00000428101 HADHQ16836 314 aaKnown RBP27.29■■□□□ 1.96
LMO1-202ENST00000428101 RALGPS1Q5JS13 557 aa27.29■■□□□ 1.96
LMO1-202ENST00000428101 LSMEM2Q8N112 164 aa27.29■■□□□ 1.96
LMO1-202ENST00000428101 BBS5Q8N3I7 341 aa27.29■■□□□ 1.96
LMO1-202ENST00000428101 NSMCE1Q8WV22 266 aa27.29■■□□□ 1.96
LMO1-202ENST00000428101 GRAMD1AQ96CP6 724 aa27.29■■□□□ 1.96
LMO1-202ENST00000428101 HIC2Q96JB3 615 aa27.29■■□□□ 1.96
LMO1-202ENST00000428101 BBC3Q96PG8 261 aaPredicted RBP27.29■■□□□ 1.96
LMO1-202ENST00000428101 RABGEF1Q9UJ41 708 aa27.29■■□□□ 1.96
LMO1-202ENST00000428101 PHTF1Q9UMS5 762 aa27.29■■□□□ 1.96
LMO1-202ENST00000428101 SATB2Q9UPW6 733 aa27.29■■□□□ 1.96
LMO1-202ENST00000428101 MFSD11O43934 449 aa27.28■■□□□ 1.96
LMO1-202ENST00000428101 HEXIM1O94992 359 aaKnown RBP27.28■■□□□ 1.96
LMO1-202ENST00000428101 VIPR1P32241 457 aa27.28■■□□□ 1.96
LMO1-202ENST00000428101 CCDC173Q0VFZ6 552 aa27.28■■□□□ 1.96
LMO1-202ENST00000428101 LRRC49Q8IUZ0 686 aa27.28■■□□□ 1.96
LMO1-202ENST00000428101 PRORYQ9H606 182 aa27.28■■□□□ 1.96
LMO1-202ENST00000428101 ASCL3Q9NQ33 180 aa27.28■■□□□ 1.96
LMO1-202ENST00000428101 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP27.28■■□□□ 1.96
LMO1-202ENST00000428101 UNC13CQ8NB66 2214 aa27.27■■□□□ 1.96
LMO1-202ENST00000428101 NTN3O00634 580 aaPredicted RBP27.27■■□□□ 1.96
LMO1-202ENST00000428101 TNFRSF10CO14798 259 aa27.27■■□□□ 1.96
LMO1-202ENST00000428101 PGLSO95336 258 aa27.27■■□□□ 1.96
LMO1-202ENST00000428101 LHCGRP22888 699 aa27.27■■□□□ 1.96
LMO1-202ENST00000428101 PDX1P52945 283 aa27.27■■□□□ 1.96
LMO1-202ENST00000428101 PTPRRQ15256 657 aa27.27■■□□□ 1.96
LMO1-202ENST00000428101 NCBP2-AS2Q69YL0 99 aa27.27■■□□□ 1.96
LMO1-202ENST00000428101 WDR48Q8TAF3 677 aa27.27■■□□□ 1.96
LMO1-202ENST00000428101 NUS1Q96E22 293 aa27.27■■□□□ 1.96
LMO1-202ENST00000428101 PACSIN1Q9BY11 444 aa27.27■■□□□ 1.96
LMO1-202ENST00000428101 WDR26Q9H7D7 661 aa27.27■■□□□ 1.96
LMO1-202ENST00000428101 NT5MQ9NPB1 228 aa27.27■■□□□ 1.96
LMO1-202ENST00000428101 PROSCO94903 275 aa27.26■■□□□ 1.95
LMO1-202ENST00000428101 GARSP41250 739 aaKnown RBP27.26■■□□□ 1.95
LMO1-202ENST00000428101 TAS2R40P59535 323 aa27.26■■□□□ 1.95
LMO1-202ENST00000428101 ERVPABLB-1P60509 514 aa27.26■■□□□ 1.95
LMO1-202ENST00000428101 GALNT2Q10471 571 aa27.26■■□□□ 1.95
LMO1-202ENST00000428101 PAFAH1B3Q15102 231 aaKnown RBP27.26■■□□□ 1.95
LMO1-202ENST00000428101 C3orf38Q5JPI3 329 aa27.26■■□□□ 1.95
LMO1-202ENST00000428101 HSD11B1LQ7Z5J1 315 aa27.26■■□□□ 1.95
LMO1-202ENST00000428101 SPACA3Q8IXA5 215 aa27.26■■□□□ 1.95
LMO1-202ENST00000428101 GPR156Q8NFN8 814 aa27.26■■□□□ 1.95
LMO1-202ENST00000428101 PIH1D2Q8WWB5 315 aa27.26■■□□□ 1.95
LMO1-202ENST00000428101 CCDC74AQ96AQ1 378 aa27.26■■□□□ 1.95
LMO1-202ENST00000428101 SCRN2Q96FV2 425 aa27.26■■□□□ 1.95
LMO1-202ENST00000428101 PRR11Q96HE9 360 aaPredicted RBP27.26■■□□□ 1.95
LMO1-202ENST00000428101 TMEM168Q9H0V1 697 aa27.26■■□□□ 1.95
LMO1-202ENST00000428101 CTTNBP2NLQ9P2B4 639 aa27.26■■□□□ 1.95
LMO1-202ENST00000428101 UVRAGQ9P2Y5 699 aa27.26■■□□□ 1.95
LMO1-202ENST00000428101 PPIL1Q9Y3C6 166 aa27.26■■□□□ 1.95
LMO1-202ENST00000428101 NPIPB15A6NHN6 443 aaPredicted RBP27.25■■□□□ 1.95
LMO1-202ENST00000428101 CYP2A6P11509 494 aaPredicted RBP27.25■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms