RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 VAT1Q99536 393 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 TRMT61BQ9BVS5 477 aaKnown RBP5.75□□□□□ -1.49
HERC4-206ENST00000427635 TRIM9Q9C026 710 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 TMPRSS4Q9NRS4 437 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 POU2F3Q9UKI9 436 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 TBC1D30Q9Y2I9 924 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 GSTK1Q9Y2Q3 226 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 DISP1Q96F81 1524 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 FAM221BA6H8Z2 402 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 GLTPD2A6NH11 291 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 TRIM38O00635 465 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 CSDE1O75534 798 aaKnown RBP5.75□□□□□ -1.49
HERC4-206ENST00000427635 CCL5P13501 91 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 ADSLP30566 484 aaPredicted RBP5.75□□□□□ -1.49
HERC4-206ENST00000427635 CTHP32929 405 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 ACTR1AP61163 376 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 LAPTM5Q13571 262 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 STXBP5Q5T5C0 1151 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 MSANTD2Q6P1R3 559 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 SLC30A10Q6XR72 485 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 NKAPQ8N5F7 415 aaKnown RBP5.75□□□□□ -1.49
HERC4-206ENST00000427635 SLC22A17Q8WUG5 538 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 OVCA2Q8WZ82 227 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 TTYH1Q9H313 450 aaPredicted RBP5.75□□□□□ -1.49
HERC4-206ENST00000427635 SHOC2Q9UQ13 582 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 PCDHA3Q9Y5H8 950 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 TRBV23OR9-2A0A075B6M9 112 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 TMEM150CB9EJG8 249 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 ACKR2O00590 384 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 RIPK2O43353 540 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 SGPL1O95470 568 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 ITGA2P17301 1181 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 TPH1P17752 444 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 OR1D2P34982 312 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 MECP2P51608 486 aaKnown RBP5.75□□□□□ -1.49
HERC4-206ENST00000427635 VBP1P61758 197 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 KLHL12Q53G59 568 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 HECTD2Q5U5R9 776 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 RTL4Q6ZR62 310 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 MTDHQ86UE4 582 aaKnown RBP5.75□□□□□ -1.49
HERC4-206ENST00000427635 CAND1Q86VP6 1230 aaKnown RBP5.75□□□□□ -1.49
HERC4-206ENST00000427635 SLC13A5Q86YT5 568 aaPredicted RBP5.75□□□□□ -1.49
HERC4-206ENST00000427635 SRFBP1Q8NEF9 429 aaKnown RBP5.75□□□□□ -1.49
HERC4-206ENST00000427635 OR4A15Q8NGL6 344 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 TEX47Q8TBZ9 253 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 ABHD5Q8WTS1 349 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 NDC1Q9BTX1 674 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 FNDC11Q9BVV2 318 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 TM6SF2Q9BZW4 377 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 SRMSQ9H3Y6 488 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 DNAJC28Q9NX36 388 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 HECAQ9UBI9 543 aaPredicted RBP5.75□□□□□ -1.49
HERC4-206ENST00000427635 IFT52Q9Y366 437 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 ABCC3O15438 1527 aa5.75□□□□□ -1.49
HERC4-206ENST00000427635 B4DGG1 531 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 WRBO00258 174 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 GSC2O15499 205 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 SERPINB7O75635 380 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 SCGNO76038 276 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 F2P00734 622 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 NPPAP01160 153 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 IRF2P14316 349 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 DRD4P21917 467 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 MYL9P24844 172 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 RFC2P35250 354 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 COILP38432 576 aaPredicted RBP5.74□□□□□ -1.49
HERC4-206ENST00000427635 RAD52P43351 418 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 CHN2P52757 468 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 MAPK10P53779 464 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 RTP1P59025 263 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 MGAT5Q09328 741 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 WSCD1Q658N2 575 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 PAOXQ6QHF9 649 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 LRIG3Q6UXM1 1119 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 KIAA0408Q6ZU52 694 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 SLC29A4Q7RTT9 530 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 ATG9AQ7Z3C6 839 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 DNAAF1Q8NEP3 725 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 EPS8L3Q8TE67 593 aaKnown RBP5.74□□□□□ -1.49
HERC4-206ENST00000427635 WFIKKN2Q8TEU8 576 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 RNF31Q96EP0 1072 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 MYO19Q96H55 970 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 ULBP1Q9BZM6 244 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 TMEM27Q9HBJ8 222 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 CNGB3Q9NQW8 809 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 DKKL1Q9UK85 242 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 FBXW2Q9UKT8 454 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 FAM205AQ6ZU69 1335 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 ERAL1O75616 437 aaKnown RBP5.74□□□□□ -1.49
HERC4-206ENST00000427635 PAEPP09466 180 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 DDX6P26196 483 aaKnown RBP eCLIP5.74□□□□□ -1.49
HERC4-206ENST00000427635 ARRB1P49407 418 aaPredicted RBP5.74□□□□□ -1.49
HERC4-206ENST00000427635 GDI2P50395 445 aaKnown RBP5.74□□□□□ -1.49
HERC4-206ENST00000427635 UGT2B15P54855 530 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 MTTPP55157 894 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 SLC6A3Q01959 620 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 SCRN3Q0VDG4 424 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 HSDL1Q3SXM5 330 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 MZT2BQ6NZ67 158 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 UNC5BQ8IZJ1 945 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms