RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 PPP4R4Q6NUP7 873 aa7.55□□□□□ -1.2
SMARCC1-202ENST00000425518 C14orf80Q86SX3 495 aa7.55□□□□□ -1.2
SMARCC1-202ENST00000425518 ZBTB46Q86UZ6 589 aa7.55□□□□□ -1.2
SMARCC1-202ENST00000425518 PTGR2Q8N8N7 351 aaPredicted RBP7.55□□□□□ -1.2
SMARCC1-202ENST00000425518 DNAJB14Q8TBM8 379 aa7.55□□□□□ -1.2
SMARCC1-202ENST00000425518 DPF3Q92784 378 aa7.55□□□□□ -1.2
SMARCC1-202ENST00000425518 TSPAN17Q96FV3 270 aa7.55□□□□□ -1.2
SMARCC1-202ENST00000425518 KCNA7Q96RP8 456 aa7.55□□□□□ -1.2
SMARCC1-202ENST00000425518 ABHD16BQ9H3Z7 469 aa7.55□□□□□ -1.2
SMARCC1-202ENST00000425518 GSTO2Q9H4Y5 243 aa7.55□□□□□ -1.2
SMARCC1-202ENST00000425518 CATSPERBQ9H7T0 1116 aa7.55□□□□□ -1.2
SMARCC1-202ENST00000425518 SMOXQ9NWM0 555 aa7.55□□□□□ -1.2
SMARCC1-202ENST00000425518 EBF1Q9UH73 591 aa7.55□□□□□ -1.2
SMARCC1-202ENST00000425518 SLC8A2Q9UPR5 921 aa7.55□□□□□ -1.2
SMARCC1-202ENST00000425518 ZNF638Q14966 1978 aaKnown RBP7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 DHRS12A0PJE2 317 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 BTBD19C9JJ37 291 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 HHLA1C9JL84 531 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 PDHXO00330 501 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 NME4O00746 187 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 INPP4BO15327 924 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 CACNG3O60359 315 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 B3GAT3O94766 335 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 THP07101 528 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 IMPDH1P20839 514 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 DNAJB1P25685 340 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 ADRA1AP35348 466 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 ALDH3B2P48448 385 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 PGFP49763 221 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 ENTPD1P49961 510 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 SERPINH1P50454 418 aaKnown RBP7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 ARSDP51689 593 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 YBX1P67809 324 aaKnown RBP7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 GRB7Q14451 532 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 ACAP2Q15057 778 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 PFKFB4Q16877 469 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 RAB41Q5JT25 222 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 TMEM207Q6UWW9 146 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 LARP4Q71RC2 724 aaKnown RBP eCLIP7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 BHLHA9Q7RTU4 235 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 SLC22A9Q8IVM8 553 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 OFCC1Q8IZS5 231 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 CLYBLQ8N0X4 340 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 RIN3Q8TB24 985 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 CALML6Q8TD86 181 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 TRPC4APQ8TEL6 797 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 TOP1MTQ969P6 601 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 MAML3Q96JK9 1138 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 PPP1R10Q96QC0 940 aaKnown RBP7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 MARCH4Q9P2E8 410 aaPredicted RBP7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 GIPC1O14908 333 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 CRCPO75575 148 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 CTSHP09668 335 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 LINC00032P0C843 101 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 CES1P23141 567 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 CCR1P32246 355 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 BRCC3P46736 316 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 SCNN1GP51170 649 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 CLCN5P51795 746 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 MAPK10P53779 464 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 EMP3P54852 163 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 FOXA1P55317 472 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 SH3BP2P78314 561 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 TIGD5Q53EQ6 642 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 UNC50Q53HI1 259 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 KLHL35Q6PF15 583 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 CYHR1Q6ZMK1 362 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 FAM43BQ6ZT52 329 aaPredicted RBP7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 ERMP1Q7Z2K6 904 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 ISCA2Q86U28 154 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 CAMK1DQ8IU85 385 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 TFAP2CQ92754 450 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 PRKD2Q9BZL6 878 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 SOX17Q9H6I2 414 aaPredicted RBP7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 MAP10Q9P2G4 905 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 CDH9Q9ULB4 789 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 CDC14AQ9UNH5 594 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 TDRKHQ9Y2W6 561 aaKnown RBP7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 NDUFAF1Q9Y375 327 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 A0A087WXM4 84 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 H0YJX3 145 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 TMX2-CTNND1H3BSU7 103 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 PIP5K1BO14986 540 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 PIRTP0C851 137 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 MTHFD1P11586 935 aaKnown RBP7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 GFAPP14136 432 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 NCK1P16333 377 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 FASP25445 335 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 PCSK1P29120 753 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 PSMD8P48556 350 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 ZNF135P52742 658 aaPredicted RBP7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 ECT2LQ008S8 904 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 DSC2Q02487 901 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 INPP5AQ14642 412 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 HABP4Q5JVS0 413 aaKnown RBP7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 ZNF678Q5SXM1 525 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 IQSEC1Q6DN90 963 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 SCIMPQ6UWF3 145 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 SLC15A3Q8IY34 581 aa7.54□□□□□ -1.2
SMARCC1-202ENST00000425518 CPNE9Q8IYJ1 553 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms