RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 TRPM6Q9BX84 2022 aa12.8□□□□□ -0.36
SGCE-203ENST00000425444 TSPAN11A1L157 253 aa12.8□□□□□ -0.36
SGCE-203ENST00000425444 H3BM21 787 aa12.8□□□□□ -0.36
SGCE-203ENST00000425444 TMEM253P0C7T8 217 aa12.8□□□□□ -0.36
SGCE-203ENST00000425444 CSNK1DP48730 415 aa12.8□□□□□ -0.36
SGCE-203ENST00000425444 SCNN1BP51168 640 aa12.8□□□□□ -0.36
SGCE-203ENST00000425444 ADKP55263 362 aaKnown RBP12.8□□□□□ -0.36
SGCE-203ENST00000425444 AP1S1P61966 158 aa12.8□□□□□ -0.36
SGCE-203ENST00000425444 ZNF211Q13398 564 aaPredicted RBP12.8□□□□□ -0.36
SGCE-203ENST00000425444 UGP2Q16851 508 aa12.8□□□□□ -0.36
SGCE-203ENST00000425444 ZNF542PQ5EBM4 170 aa12.8□□□□□ -0.36
SGCE-203ENST00000425444 PARGQ86W56 976 aa12.8□□□□□ -0.36
SGCE-203ENST00000425444 HCAR2Q8TDS4 363 aa12.8□□□□□ -0.36
SGCE-203ENST00000425444 ASB12Q8WXK4 309 aa12.8□□□□□ -0.36
SGCE-203ENST00000425444 EXTL1Q92935 676 aa12.8□□□□□ -0.36
SGCE-203ENST00000425444 BMFQ96LC9 184 aa12.8□□□□□ -0.36
SGCE-203ENST00000425444 ZNF599Q96NL3 588 aa12.8□□□□□ -0.36
SGCE-203ENST00000425444 PSKH2Q96QS6 385 aa12.8□□□□□ -0.36
SGCE-203ENST00000425444 CCNL2Q96S94 520 aaPredicted RBP12.8□□□□□ -0.36
SGCE-203ENST00000425444 TRIM5Q9C035 493 aa12.8□□□□□ -0.36
SGCE-203ENST00000425444 ABCG4Q9H172 646 aa12.8□□□□□ -0.36
SGCE-203ENST00000425444 PCDH12Q9NPG4 1184 aa12.8□□□□□ -0.36
SGCE-203ENST00000425444 SPTLC3Q9NUV7 552 aa12.8□□□□□ -0.36
SGCE-203ENST00000425444 SATB2Q9UPW6 733 aa12.8□□□□□ -0.36
SGCE-203ENST00000425444 ATP8A1Q9Y2Q0 1164 aa12.8□□□□□ -0.36
SGCE-203ENST00000425444 COQ6Q9Y2Z9 468 aa12.8□□□□□ -0.36
SGCE-203ENST00000425444 PRRC2CQ9Y520 2896 aaKnown RBP12.79□□□□□ -0.36
SGCE-203ENST00000425444 DOCK9Q9BZ29 2069 aa12.79□□□□□ -0.36
SGCE-203ENST00000425444 AKR1B15C9JRZ8 316 aaPredicted RBP12.79□□□□□ -0.36
SGCE-203ENST00000425444 MUSKO15146 869 aa12.79□□□□□ -0.36
SGCE-203ENST00000425444 FFAR2O15552 330 aa12.79□□□□□ -0.36
SGCE-203ENST00000425444 BUB1BO60566 1050 aaPredicted RBP12.79□□□□□ -0.36
SGCE-203ENST00000425444 PIAS2O75928 621 aa12.79□□□□□ -0.36
SGCE-203ENST00000425444 PRKCGP05129 697 aa12.79□□□□□ -0.36
SGCE-203ENST00000425444 KRT7P08729 469 aa12.79□□□□□ -0.36
SGCE-203ENST00000425444 CD48P09326 243 aa12.79□□□□□ -0.36
SGCE-203ENST00000425444 FAM87AP0C7U9 286 aa12.79□□□□□ -0.36
SGCE-203ENST00000425444 ALPPL2P10696 532 aa12.79□□□□□ -0.36
SGCE-203ENST00000425444 ITGB6P18564 788 aa12.79□□□□□ -0.36
SGCE-203ENST00000425444 DGKAP23743 735 aa12.79□□□□□ -0.36
SGCE-203ENST00000425444 HSPA9P38646 679 aaKnown RBP12.79□□□□□ -0.36
SGCE-203ENST00000425444 THOP1P52888 689 aa12.79□□□□□ -0.36
SGCE-203ENST00000425444 HNRNPKP61978 463 aaKnown RBP eCLIP12.79□□□□□ -0.361e-10■■■■■ 35.6
SGCE-203ENST00000425444 SKOR1P84550 965 aa12.79□□□□□ -0.36
SGCE-203ENST00000425444 SLC10A7Q0GE19 358 aa12.79□□□□□ -0.36
SGCE-203ENST00000425444 MMRN1Q13201 1228 aa12.79□□□□□ -0.36
SGCE-203ENST00000425444 CLN3Q13286 438 aa12.79□□□□□ -0.36
SGCE-203ENST00000425444 DPYSL3Q14195 570 aa12.79□□□□□ -0.36
SGCE-203ENST00000425444 MESDQ14696 234 aa12.79□□□□□ -0.36
SGCE-203ENST00000425444 ASTE1Q2TB18 679 aaPredicted RBP12.79□□□□□ -0.36
SGCE-203ENST00000425444 TMEM52BQ4KMG9 183 aa12.79□□□□□ -0.36
SGCE-203ENST00000425444 IGF2-ASQ6U949 168 aa12.79□□□□□ -0.36
SGCE-203ENST00000425444 CPNE8Q86YQ8 564 aa12.79□□□□□ -0.36
SGCE-203ENST00000425444 KCTD6Q8NC69 237 aa12.79□□□□□ -0.36
SGCE-203ENST00000425444 IFT43Q96FT9 208 aa12.79□□□□□ -0.36
SGCE-203ENST00000425444 SLC46A1Q96NT5 459 aa12.79□□□□□ -0.36
SGCE-203ENST00000425444 KLF6Q99612 283 aaPredicted RBP12.79□□□□□ -0.36
SGCE-203ENST00000425444 CHP1Q99653 195 aa12.79□□□□□ -0.36
SGCE-203ENST00000425444 ANP32EQ9BTT0 268 aa12.79□□□□□ -0.36
SGCE-203ENST00000425444 NHEJ1Q9H9Q4 299 aaPredicted RBP12.79□□□□□ -0.36
SGCE-203ENST00000425444 UCKL1Q9NWZ5 548 aa12.79□□□□□ -0.36
SGCE-203ENST00000425444 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.79□□□□□ -0.36
SGCE-203ENST00000425444 SETD2Q9BYW2 2564 aaPredicted RBP12.79□□□□□ -0.36
SGCE-203ENST00000425444 SPTY2D1-AS1A0A0U1RR47 76 aa12.78□□□□□ -0.36
SGCE-203ENST00000425444 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.78□□□□□ -0.36
SGCE-203ENST00000425444 NEMP2A6NFY4 417 aa12.78□□□□□ -0.36
SGCE-203ENST00000425444 RIOK3O14730 519 aaKnown RBP12.78□□□□□ -0.36
SGCE-203ENST00000425444 MFSD11O43934 449 aa12.78□□□□□ -0.36
SGCE-203ENST00000425444 LZTS3O60299 673 aaPredicted RBP12.78□□□□□ -0.36
SGCE-203ENST00000425444 MAFKO60675 156 aa12.78□□□□□ -0.36
SGCE-203ENST00000425444 SFTPCP11686 197 aa12.78□□□□□ -0.36
SGCE-203ENST00000425444 MAN1A1P33908 653 aa12.78□□□□□ -0.36
SGCE-203ENST00000425444 IGFALSP35858 605 aa12.78□□□□□ -0.36
SGCE-203ENST00000425444 MMP12P39900 470 aa12.78□□□□□ -0.36
SGCE-203ENST00000425444 INHBCP55103 352 aa12.78□□□□□ -0.36
SGCE-203ENST00000425444 PFN3P60673 137 aa12.78□□□□□ -0.36
SGCE-203ENST00000425444 POLR2LP62875 67 aaKnown RBP12.78□□□□□ -0.36
SGCE-203ENST00000425444 NSUN2Q08J23 767 aaKnown RBP eCLIP12.78□□□□□ -0.36
SGCE-203ENST00000425444 PTK2BQ14289 1009 aa12.78□□□□□ -0.36
SGCE-203ENST00000425444 FZD2Q14332 565 aa12.78□□□□□ -0.36
SGCE-203ENST00000425444 LRRC14Q15048 493 aa12.78□□□□□ -0.36
SGCE-203ENST00000425444 IRF4Q15306 451 aa12.78□□□□□ -0.36
SGCE-203ENST00000425444 ATP13A4Q4VNC1 1196 aa12.78□□□□□ -0.36
SGCE-203ENST00000425444 MARC1Q5VT66 337 aa12.78□□□□□ -0.36
SGCE-203ENST00000425444 FOXR1Q6PIV2 292 aa12.78□□□□□ -0.36
SGCE-203ENST00000425444 USP53Q70EK8 1073 aa12.78□□□□□ -0.36
SGCE-203ENST00000425444 ZSWIM9Q86XI8 627 aa12.78□□□□□ -0.36
SGCE-203ENST00000425444 MAP7D3Q8IWC1 876 aa12.78□□□□□ -0.36
SGCE-203ENST00000425444 PDCD6IPQ8WUM4 868 aaKnown RBP12.78□□□□□ -0.36
SGCE-203ENST00000425444 ZNF670Q9BS34 389 aa12.78□□□□□ -0.36
SGCE-203ENST00000425444 GPR27Q9NS67 375 aa12.78□□□□□ -0.36
SGCE-203ENST00000425444 MAN2B2Q9Y2E5 1009 aa12.78□□□□□ -0.36
SGCE-203ENST00000425444 TTC24A2A3L6 582 aaPredicted RBP12.77□□□□□ -0.37
SGCE-203ENST00000425444 NEBLO76041 1014 aa12.77□□□□□ -0.37
SGCE-203ENST00000425444 CSF2P04141 144 aa12.77□□□□□ -0.37
SGCE-203ENST00000425444 PCCBP05166 539 aa12.77□□□□□ -0.37
SGCE-203ENST00000425444 ELFN1P0C7U0 828 aa12.77□□□□□ -0.37
SGCE-203ENST00000425444 CKMT1AP12532 417 aa12.77□□□□□ -0.37
SGCE-203ENST00000425444 NME1P15531 152 aaKnown RBP12.77□□□□□ -0.37
SGCE-203ENST00000425444 JUNDP17535 347 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms