RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 JCHAINP01591 159 aa15.72■□□□□ 0.11
SHOX2-202ENST00000425436 CTSLP07711 333 aa15.72■□□□□ 0.11
SHOX2-202ENST00000425436 SNRPAP09012 282 aaKnown RBP15.72■□□□□ 0.11
SHOX2-202ENST00000425436 SP9P0CG40 484 aa15.72■□□□□ 0.11
SHOX2-202ENST00000425436 CCNB1P14635 433 aa15.72■□□□□ 0.11
SHOX2-202ENST00000425436 RGRP47804 291 aa15.72■□□□□ 0.11
SHOX2-202ENST00000425436 RPS14P62263 151 aaKnown RBP15.72■□□□□ 0.11
SHOX2-202ENST00000425436 DNAJC3Q13217 504 aa15.72■□□□□ 0.11
SHOX2-202ENST00000425436 SPARCL1Q14515 664 aa15.72■□□□□ 0.11
SHOX2-202ENST00000425436 POM121L1PQ3SYA9 428 aa15.72■□□□□ 0.11
SHOX2-202ENST00000425436 ARSIQ5FYB1 569 aa15.72■□□□□ 0.11
SHOX2-202ENST00000425436 TMCO4Q5TGY1 634 aa15.72■□□□□ 0.11
SHOX2-202ENST00000425436 MARC1Q5VT66 337 aa15.72■□□□□ 0.11
SHOX2-202ENST00000425436 NAPEPLDQ6IQ20 393 aa15.72■□□□□ 0.11
SHOX2-202ENST00000425436 UNC5AQ6ZN44 842 aa15.72■□□□□ 0.11
SHOX2-202ENST00000425436 KLHDC8BQ8IXV7 354 aa15.72■□□□□ 0.11
SHOX2-202ENST00000425436 PGBD5Q8N414 524 aa15.72■□□□□ 0.11
SHOX2-202ENST00000425436 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.72■□□□□ 0.11
SHOX2-202ENST00000425436 NSMCE1Q8WV22 266 aa15.72■□□□□ 0.11
SHOX2-202ENST00000425436 OR8D1Q8WZ84 308 aa15.72■□□□□ 0.11
SHOX2-202ENST00000425436 SIPA1Q96FS4 1042 aa15.72■□□□□ 0.11
SHOX2-202ENST00000425436 ZNF419Q96HQ0 510 aaPredicted RBP15.72■□□□□ 0.11
SHOX2-202ENST00000425436 MAGEB18Q96M61 343 aa15.72■□□□□ 0.11
SHOX2-202ENST00000425436 ZNF599Q96NL3 588 aa15.72■□□□□ 0.11
SHOX2-202ENST00000425436 CINPQ9BW66 212 aaPredicted RBP15.72■□□□□ 0.11
SHOX2-202ENST00000425436 CEP41Q9BYV8 373 aa15.72■□□□□ 0.11
SHOX2-202ENST00000425436 RSPH9Q9H1X1 276 aaPredicted RBP15.72■□□□□ 0.11
SHOX2-202ENST00000425436 CD93Q9NPY3 652 aa15.72■□□□□ 0.11
SHOX2-202ENST00000425436 MOCS1Q9NZB8 636 aa15.72■□□□□ 0.11
SHOX2-202ENST00000425436 SAMD15Q9P1V8 674 aa15.72■□□□□ 0.11
SHOX2-202ENST00000425436 EBF1Q9UH73 591 aa15.72■□□□□ 0.11
SHOX2-202ENST00000425436 EVLQ9UI08 416 aaPredicted RBP15.72■□□□□ 0.11
SHOX2-202ENST00000425436 FBXO4Q9UKT5 387 aa15.72■□□□□ 0.11
SHOX2-202ENST00000425436 SARDHQ9UL12 918 aa15.72■□□□□ 0.11
SHOX2-202ENST00000425436 TTLL3Q9Y4R7 772 aa15.72■□□□□ 0.11
SHOX2-202ENST00000425436 EML5Q05BV3 1969 aa15.71■□□□□ 0.11
SHOX2-202ENST00000425436 FAM159BA6NKW6 160 aa15.71■□□□□ 0.11
SHOX2-202ENST00000425436 INSIG1O15503 277 aa15.71■□□□□ 0.11
SHOX2-202ENST00000425436 POLBP06746 335 aa15.71■□□□□ 0.11
SHOX2-202ENST00000425436 DRD4P21917 467 aa15.71■□□□□ 0.11
SHOX2-202ENST00000425436 PSMD8P48556 350 aa15.71■□□□□ 0.11
SHOX2-202ENST00000425436 CCNHP51946 323 aaPredicted RBP15.71■□□□□ 0.11
SHOX2-202ENST00000425436 METAP1P53582 386 aa15.71■□□□□ 0.11
SHOX2-202ENST00000425436 MAXP61244 160 aa15.71■□□□□ 0.11
SHOX2-202ENST00000425436 SNRPD1P62314 119 aaKnown RBP15.71■□□□□ 0.11
SHOX2-202ENST00000425436 ELAVL3Q14576 367 aaKnown RBP15.71■□□□□ 0.11
SHOX2-202ENST00000425436 RFTN1Q14699 578 aaPredicted RBP15.71■□□□□ 0.11
SHOX2-202ENST00000425436 SEPT7Q16181 437 aaKnown RBP15.71■□□□□ 0.11
SHOX2-202ENST00000425436 MYLK3Q32MK0 819 aa15.71■□□□□ 0.11
SHOX2-202ENST00000425436 SPANXN3Q5MJ09 141 aa15.71■□□□□ 0.11
SHOX2-202ENST00000425436 KCTD11Q693B1 232 aa15.71■□□□□ 0.11
SHOX2-202ENST00000425436 CASC4Q6P4E1 433 aa15.71■□□□□ 0.11
SHOX2-202ENST00000425436 METTL3Q86U44 580 aaKnown RBP15.71■□□□□ 0.11
SHOX2-202ENST00000425436 TAX1BP1Q86VP1 789 aa15.71■□□□□ 0.11
SHOX2-202ENST00000425436 RASSF3Q86WH2 238 aa15.71■□□□□ 0.11
SHOX2-202ENST00000425436 CTAGE3PQ8IX95 158 aa15.71■□□□□ 0.11
SHOX2-202ENST00000425436 AGGF1Q8N302 714 aaeCLIP15.71■□□□□ 0.11
SHOX2-202ENST00000425436 FRMD1Q8N878 549 aa15.71■□□□□ 0.11
SHOX2-202ENST00000425436 ANKRD42Q8N9B4 389 aa15.71■□□□□ 0.11
SHOX2-202ENST00000425436 OR2AP1Q8NGE2 309 aa15.71■□□□□ 0.11
SHOX2-202ENST00000425436 GRIN3AQ8TCU5 1115 aa15.71■□□□□ 0.11
SHOX2-202ENST00000425436 DENND1AQ8TEH3 1009 aa15.71■□□□□ 0.11
SHOX2-202ENST00000425436 RLN3Q8WXF3 142 aa15.71■□□□□ 0.11
SHOX2-202ENST00000425436 AGAP3Q96P47 875 aa15.71■□□□□ 0.11
SHOX2-202ENST00000425436 FCRL5Q96RD9 977 aa15.71■□□□□ 0.11
SHOX2-202ENST00000425436 IL12RB2Q99665 862 aa15.71■□□□□ 0.11
SHOX2-202ENST00000425436 ZDHHC6Q9H6R6 413 aa15.71■□□□□ 0.11
SHOX2-202ENST00000425436 NT5MQ9NPB1 228 aa15.71■□□□□ 0.11
SHOX2-202ENST00000425436 CASS4Q9NQ75 786 aa15.71■□□□□ 0.11
SHOX2-202ENST00000425436 RBM22Q9NW64 420 aaKnown RBP eCLIP15.71■□□□□ 0.11
SHOX2-202ENST00000425436 SEPT3Q9UH03 358 aa15.71■□□□□ 0.11
SHOX2-202ENST00000425436 VPS13AQ96RL7 3174 aa15.71■□□□□ 0.11
SHOX2-202ENST00000425436 AXIN1O15169 862 aa15.7■□□□□ 0.1
SHOX2-202ENST00000425436 RNASEH1O60930 286 aaKnown RBP15.7■□□□□ 0.1
SHOX2-202ENST00000425436 NEBLO76041 1014 aa15.7■□□□□ 0.1
SHOX2-202ENST00000425436 GSRP00390 522 aa15.7■□□□□ 0.1
SHOX2-202ENST00000425436 VIMP08670 466 aaKnown RBP15.7■□□□□ 0.1
SHOX2-202ENST00000425436 CREB1P16220 341 aa15.7■□□□□ 0.1
SHOX2-202ENST00000425436 KRT4P19013 534 aa15.7■□□□□ 0.1
SHOX2-202ENST00000425436 SLC8A1P32418 973 aa15.7■□□□□ 0.1
SHOX2-202ENST00000425436 RENBPP51606 427 aa15.7■□□□□ 0.1
SHOX2-202ENST00000425436 NUBP1P53384 320 aa15.7■□□□□ 0.1
SHOX2-202ENST00000425436 HNRNPDQ14103 355 aaKnown RBP15.7■□□□□ 0.1
SHOX2-202ENST00000425436 ZNF235Q14590 738 aa15.7■□□□□ 0.1
SHOX2-202ENST00000425436 ZNF776Q68DI1 518 aaPredicted RBP15.7■□□□□ 0.1
SHOX2-202ENST00000425436 PPM1NQ8N819 430 aa15.7■□□□□ 0.1
SHOX2-202ENST00000425436 ANKS4BQ8N8V4 417 aa15.7■□□□□ 0.1
SHOX2-202ENST00000425436 PRSS33Q8NF86 280 aa15.7■□□□□ 0.1
SHOX2-202ENST00000425436 GRAMD1AQ96CP6 724 aa15.7■□□□□ 0.1
SHOX2-202ENST00000425436 MRRFQ96E11 262 aaKnown RBP15.7■□□□□ 0.1
SHOX2-202ENST00000425436 PSKH2Q96QS6 385 aa15.7■□□□□ 0.1
SHOX2-202ENST00000425436 HEPHQ9BQS7 1158 aa15.7■□□□□ 0.1
SHOX2-202ENST00000425436 IL22Q9GZX6 179 aa15.7■□□□□ 0.1
SHOX2-202ENST00000425436 HAUS2Q9NVX0 235 aa15.7■□□□□ 0.1
SHOX2-202ENST00000425436 IL36AQ9UHA7 158 aa15.7■□□□□ 0.1
SHOX2-202ENST00000425436 PPM1HQ9ULR3 514 aa15.7■□□□□ 0.1
SHOX2-202ENST00000425436 ATXN2Q99700 1313 aaKnown RBP15.7■□□□□ 0.1
SHOX2-202ENST00000425436 PLK4O00444 970 aa15.69■□□□□ 0.1
SHOX2-202ENST00000425436 MID1O15344 667 aa15.69■□□□□ 0.1
SHOX2-202ENST00000425436 TYROBPO43914 113 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms