RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 PRAMEF11O60813 436 aa12.3□□□□□ -0.44
HLA-DQB3-203ENST00000425319 GOLGA6DP0CG33 693 aa12.3□□□□□ -0.44
HLA-DQB3-203ENST00000425319 CCNB1P14635 433 aa12.3□□□□□ -0.44
HLA-DQB3-203ENST00000425319 TRIM23P36406 574 aa12.3□□□□□ -0.44
HLA-DQB3-203ENST00000425319 HSPA9P38646 679 aaKnown RBP12.3□□□□□ -0.44
HLA-DQB3-203ENST00000425319 MMP12P39900 470 aa12.3□□□□□ -0.44
HLA-DQB3-203ENST00000425319 SCNN1BP51168 640 aa12.3□□□□□ -0.44
HLA-DQB3-203ENST00000425319 GSCP56915 257 aaPredicted RBP12.3□□□□□ -0.44
HLA-DQB3-203ENST00000425319 RAB15P59190 212 aa12.3□□□□□ -0.44
HLA-DQB3-203ENST00000425319 AP1S1P61966 158 aa12.3□□□□□ -0.44
HLA-DQB3-203ENST00000425319 MC1RQ01726 317 aa12.3□□□□□ -0.44
HLA-DQB3-203ENST00000425319 MIIPQ5JXC2 388 aa12.3□□□□□ -0.44
HLA-DQB3-203ENST00000425319 DCAF12Q5T6F0 453 aa12.3□□□□□ -0.44
HLA-DQB3-203ENST00000425319 LIPIQ6XZB0 460 aa12.3□□□□□ -0.44
HLA-DQB3-203ENST00000425319 PHF13Q86YI8 300 aaPredicted RBP12.3□□□□□ -0.44
HLA-DQB3-203ENST00000425319 NRSN1Q8IZ57 195 aa12.3□□□□□ -0.44
HLA-DQB3-203ENST00000425319 OR1E3Q8WZA6 343 aa12.3□□□□□ -0.44
HLA-DQB3-203ENST00000425319 FUBP1Q96AE4 644 aaKnown RBP12.3□□□□□ -0.44
HLA-DQB3-203ENST00000425319 TEFMQ96QE5 360 aaKnown RBP12.3□□□□□ -0.44
HLA-DQB3-203ENST00000425319 VPS16Q9H269 839 aa12.3□□□□□ -0.44
HLA-DQB3-203ENST00000425319 NLRC4Q9NPP4 1024 aa12.3□□□□□ -0.44
HLA-DQB3-203ENST00000425319 SLC39A1Q9NY26 324 aa12.3□□□□□ -0.44
HLA-DQB3-203ENST00000425319 GOLGA6AQ9NYA3 693 aa12.3□□□□□ -0.44
HLA-DQB3-203ENST00000425319 LHX3Q9UBR4 397 aa12.3□□□□□ -0.44
HLA-DQB3-203ENST00000425319 TUBD1Q9UJT1 453 aa12.3□□□□□ -0.44
HLA-DQB3-203ENST00000425319 ANAPC2Q9UJX6 822 aa12.3□□□□□ -0.44
HLA-DQB3-203ENST00000425319 PNMA8BQ9ULN7 279 aaPredicted RBP12.3□□□□□ -0.44
HLA-DQB3-203ENST00000425319 TMEM202A6NGA9 273 aa12.29□□□□□ -0.44
HLA-DQB3-203ENST00000425319 ZNF891A8MT65 544 aaPredicted RBP12.29□□□□□ -0.44
HLA-DQB3-203ENST00000425319 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.29□□□□□ -0.44
HLA-DQB3-203ENST00000425319 DFFAO00273 331 aa12.29□□□□□ -0.44
HLA-DQB3-203ENST00000425319 TERTO14746 1132 aaKnown RBP12.29□□□□□ -0.44
HLA-DQB3-203ENST00000425319 PYGLP06737 847 aa12.29□□□□□ -0.44
HLA-DQB3-203ENST00000425319 MYCLP1P12525 358 aaPredicted RBP12.29□□□□□ -0.44
HLA-DQB3-203ENST00000425319 CDK11BP21127 795 aaKnown RBP12.29□□□□□ -0.44
HLA-DQB3-203ENST00000425319 PAPOLAP51003 745 aaKnown RBP12.29□□□□□ -0.44
HLA-DQB3-203ENST00000425319 B4GALNT1Q00973 533 aa12.29□□□□□ -0.44
HLA-DQB3-203ENST00000425319 FMO1Q01740 532 aa12.29□□□□□ -0.44
HLA-DQB3-203ENST00000425319 C1QBPQ07021 282 aaKnown RBP12.29□□□□□ -0.44
HLA-DQB3-203ENST00000425319 AFMIDQ63HM1 303 aa12.29□□□□□ -0.44
HLA-DQB3-203ENST00000425319 DPPA4Q7L190 304 aa12.29□□□□□ -0.44
HLA-DQB3-203ENST00000425319 VASH2Q86V25 355 aa12.29□□□□□ -0.44
HLA-DQB3-203ENST00000425319 DTX1Q86Y01 620 aa12.29□□□□□ -0.44
HLA-DQB3-203ENST00000425319 CACNA2D3Q8IZS8 1091 aa12.29□□□□□ -0.44
HLA-DQB3-203ENST00000425319 PYROXD2Q8N2H3 581 aa12.29□□□□□ -0.44
HLA-DQB3-203ENST00000425319 PDCD6IPQ8WUM4 868 aaKnown RBP12.29□□□□□ -0.44
HLA-DQB3-203ENST00000425319 SLC20A1Q8WUM9 679 aa12.29□□□□□ -0.44
HLA-DQB3-203ENST00000425319 SH3KBP1Q96B97 665 aa12.29□□□□□ -0.44
HLA-DQB3-203ENST00000425319 NUS1Q96E22 293 aa12.29□□□□□ -0.44
HLA-DQB3-203ENST00000425319 PDXPQ96GD0 296 aa12.29□□□□□ -0.44
HLA-DQB3-203ENST00000425319 ZPBPQ9BS86 351 aa12.29□□□□□ -0.44
HLA-DQB3-203ENST00000425319 TRIT1Q9H3H1 467 aaKnown RBP12.29□□□□□ -0.44
HLA-DQB3-203ENST00000425319 SEMA6CQ9H3T2 930 aa12.29□□□□□ -0.44
HLA-DQB3-203ENST00000425319 SUDS3Q9H7L9 328 aaPredicted RBP12.29□□□□□ -0.44
HLA-DQB3-203ENST00000425319 RDH14Q9HBH5 336 aa12.29□□□□□ -0.44
HLA-DQB3-203ENST00000425319 FAM207AQ9NSI2 230 aaPredicted RBP12.29□□□□□ -0.44
HLA-DQB3-203ENST00000425319 KCNK4Q9NYG8 393 aa12.29□□□□□ -0.44
HLA-DQB3-203ENST00000425319 NOCTQ9UK39 431 aaKnown RBP12.29□□□□□ -0.44
HLA-DQB3-203ENST00000425319 PCDHGA3Q9Y5H0 932 aa12.29□□□□□ -0.44
HLA-DQB3-203ENST00000425319 TDRD6O60522 2096 aaKnown RBP12.29□□□□□ -0.44
HLA-DQB3-203ENST00000425319 BPTFQ12830 3046 aa12.28□□□□□ -0.44
HLA-DQB3-203ENST00000425319 A8MX80 341 aa12.28□□□□□ -0.44
HLA-DQB3-203ENST00000425319 J3KR12 359 aa12.28□□□□□ -0.44
HLA-DQB3-203ENST00000425319 CCP110O43303 1012 aa12.28□□□□□ -0.44
HLA-DQB3-203ENST00000425319 UNGP13051 313 aaPredicted RBP12.28□□□□□ -0.44
HLA-DQB3-203ENST00000425319 TNFAIP3P21580 790 aa12.28□□□□□ -0.44
HLA-DQB3-203ENST00000425319 MAP4P27816 1152 aaKnown RBP12.28□□□□□ -0.44
HLA-DQB3-203ENST00000425319 LIMK2P53671 638 aa12.28□□□□□ -0.44
HLA-DQB3-203ENST00000425319 OR1D5P58170 312 aa12.28□□□□□ -0.44
HLA-DQB3-203ENST00000425319 GPLD1P80108 840 aa12.28□□□□□ -0.44
HLA-DQB3-203ENST00000425319 IL10RBQ08334 325 aa12.28□□□□□ -0.44
HLA-DQB3-203ENST00000425319 ZNF235Q14590 738 aa12.28□□□□□ -0.44
HLA-DQB3-203ENST00000425319 CLEC16AQ2KHT3 1053 aa12.28□□□□□ -0.44
HLA-DQB3-203ENST00000425319 PPP1R15BQ5SWA1 713 aa12.28□□□□□ -0.44
HLA-DQB3-203ENST00000425319 ERMARDQ5T6L9 678 aa12.28□□□□□ -0.44
HLA-DQB3-203ENST00000425319 DENND2CQ68D51 928 aa12.28□□□□□ -0.44
HLA-DQB3-203ENST00000425319 KDELC2Q7Z4H8 507 aa12.28□□□□□ -0.44
HLA-DQB3-203ENST00000425319 SLITRK4Q8IW52 837 aa12.28□□□□□ -0.44
HLA-DQB3-203ENST00000425319 NETO2Q8NC67 525 aa12.28□□□□□ -0.44
HLA-DQB3-203ENST00000425319 PLA2G15Q8NCC3 412 aa12.28□□□□□ -0.44
HLA-DQB3-203ENST00000425319 TSEN2Q8NCE0 465 aaKnown RBP12.28□□□□□ -0.44
HLA-DQB3-203ENST00000425319 OR4D9Q8NGE8 314 aa12.28□□□□□ -0.44
HLA-DQB3-203ENST00000425319 OR10G6Q8NH81 332 aa12.28□□□□□ -0.44
HLA-DQB3-203ENST00000425319 JPH3Q8WXH2 748 aaPredicted RBP12.28□□□□□ -0.44
HLA-DQB3-203ENST00000425319 ZNF599Q96NL3 588 aa12.28□□□□□ -0.44
HLA-DQB3-203ENST00000425319 MCEEQ96PE7 176 aa12.28□□□□□ -0.44
HLA-DQB3-203ENST00000425319 DDA1Q9BW61 102 aa12.28□□□□□ -0.44
HLA-DQB3-203ENST00000425319 DHX35Q9H5Z1 703 aaKnown RBP12.28□□□□□ -0.44
HLA-DQB3-203ENST00000425319 ZWILCHQ9H900 591 aa12.28□□□□□ -0.44
HLA-DQB3-203ENST00000425319 FGF22Q9HCT0 170 aa12.28□□□□□ -0.44
HLA-DQB3-203ENST00000425319 MRPL40Q9NQ50 206 aaKnown RBP12.28□□□□□ -0.44
HLA-DQB3-203ENST00000425319 SAMSN1Q9NSI8 373 aaKnown RBP12.28□□□□□ -0.44
HLA-DQB3-203ENST00000425319 PARVAQ9NVD7 372 aa12.28□□□□□ -0.44
HLA-DQB3-203ENST00000425319 TAB2Q9NYJ8 693 aa12.28□□□□□ -0.44
HLA-DQB3-203ENST00000425319 TAAR2Q9P1P5 351 aa12.28□□□□□ -0.44
HLA-DQB3-203ENST00000425319 PHTF1Q9UMS5 762 aa12.28□□□□□ -0.44
HLA-DQB3-203ENST00000425319 PCDHB3Q9Y5E6 796 aa12.28□□□□□ -0.44
HLA-DQB3-203ENST00000425319 LAMA5O15230 3695 aa12.27□□□□□ -0.44
HLA-DQB3-203ENST00000425319 C9orf172C9J069 976 aa12.27□□□□□ -0.45
HLA-DQB3-203ENST00000425319 B4GAT1O43505 415 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms