RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 FOXJ2Q9P0K8 574 aa15.04■□□□□ -0
ATG4B-209ENST00000425239 LRIT1Q9P2V4 623 aa15.04■□□□□ -0
ATG4B-209ENST00000425239 LIMA1Q9UHB6 759 aaKnown RBP15.04■□□□□ -0
ATG4B-209ENST00000425239 LOXL2Q9Y4K0 774 aa15.04■□□□□ -0
ATG4B-209ENST00000425239 HECTD1Q9ULT8 2610 aa15.04■□□□□ -0
ATG4B-209ENST00000425239 PRAMEF33A0A0G2JMD5 474 aa15.03■□□□□ -0
ATG4B-209ENST00000425239 NUDT21O43809 227 aaKnown RBP15.03■□□□□ -0
ATG4B-209ENST00000425239 PRAMEF10O60809 474 aa15.03■□□□□ -0
ATG4B-209ENST00000425239 WISP1O95388 367 aa15.03■□□□□ -0
ATG4B-209ENST00000425239 PEX11BO96011 259 aa15.03■□□□□ -0
ATG4B-209ENST00000425239 ITGB2P05107 769 aa15.03■□□□□ -0
ATG4B-209ENST00000425239 LIPCP11150 499 aa15.03■□□□□ -0
ATG4B-209ENST00000425239 MAMLD1Q13495 774 aa15.03■□□□□ -0
ATG4B-209ENST00000425239 NR1D2Q14995 579 aa15.03■□□□□ -0
ATG4B-209ENST00000425239 PNCKQ6P2M8 343 aa15.03■□□□□ -0
ATG4B-209ENST00000425239 DNAJC24Q6P3W2 148 aa15.03■□□□□ -0
ATG4B-209ENST00000425239 DPPA4Q7L190 304 aa15.03■□□□□ -0
ATG4B-209ENST00000425239 ZNF438Q7Z4V0 828 aa15.03■□□□□ -0
ATG4B-209ENST00000425239 NPWQ8N729 165 aa15.03■□□□□ -0
ATG4B-209ENST00000425239 ATL2Q8NHH9 583 aa15.03■□□□□ -0
ATG4B-209ENST00000425239 GPBAR1Q8TDU6 330 aa15.03■□□□□ -0
ATG4B-209ENST00000425239 SGF29Q96ES7 293 aa15.03■□□□□ -0
ATG4B-209ENST00000425239 COQ10AQ96MF6 247 aa15.03■□□□□ -0
ATG4B-209ENST00000425239 NCAPGQ9BPX3 1015 aa15.03■□□□□ -0
ATG4B-209ENST00000425239 SEMA6CQ9H3T2 930 aa15.03■□□□□ -0
ATG4B-209ENST00000425239 ATP13A3Q9H7F0 1226 aa15.03■□□□□ -0
ATG4B-209ENST00000425239 PALMO75781 387 aa15.02■□□□□ -0
ATG4B-209ENST00000425239 FGF1P05230 155 aa15.02■□□□□ -0
ATG4B-209ENST00000425239 CEACAM5P06731 702 aa15.02■□□□□ -0
ATG4B-209ENST00000425239 ERCC2P18074 760 aa15.02■□□□□ -0
ATG4B-209ENST00000425239 CR2P20023 1033 aa15.02■□□□□ -0
ATG4B-209ENST00000425239 TPI1P60174 286 aa15.02■□□□□ -0
ATG4B-209ENST00000425239 C16orf72Q14CZ0 275 aa15.02■□□□□ -0
ATG4B-209ENST00000425239 ERMARDQ5T6L9 678 aa15.02■□□□□ -0
ATG4B-209ENST00000425239 SPECC1LQ69YQ0 1117 aa15.02■□□□□ -0
ATG4B-209ENST00000425239 PLEKHA7Q6IQ23 1121 aa15.02■□□□□ -0
ATG4B-209ENST00000425239 XKR5Q6UX68 686 aa15.02■□□□□ -0
ATG4B-209ENST00000425239 TAF8Q7Z7C8 310 aa15.02■□□□□ -0
ATG4B-209ENST00000425239 ZFAND4Q86XD8 727 aa15.02■□□□□ -0
ATG4B-209ENST00000425239 PTCD2Q8WV60 388 aaKnown RBP15.02■□□□□ -0
ATG4B-209ENST00000425239 EXTL1Q92935 676 aa15.02■□□□□ -0
ATG4B-209ENST00000425239 TMEM159Q96B96 161 aa15.02■□□□□ -0
ATG4B-209ENST00000425239 PSKH2Q96QS6 385 aa15.02■□□□□ -0
ATG4B-209ENST00000425239 KCTD15Q96SI1 283 aaPredicted RBP15.02■□□□□ -0
ATG4B-209ENST00000425239 B3GNT4Q9C0J1 378 aa15.02■□□□□ -0
ATG4B-209ENST00000425239 CLMPQ9H6B4 373 aa15.02■□□□□ -0
ATG4B-209ENST00000425239 LMBRD1Q9NUN5 540 aa15.02■□□□□ -0
ATG4B-209ENST00000425239 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.02■□□□□ -0
ATG4B-209ENST00000425239 CHMP5Q9NZZ3 219 aa15.02■□□□□ -0
ATG4B-209ENST00000425239 PISDQ9UG56 409 aa15.02■□□□□ -0
ATG4B-209ENST00000425239 AP4E1Q9UPM8 1137 aa15.02■□□□□ -0
ATG4B-209ENST00000425239 TTC24A2A3L6 582 aaPredicted RBP15.01□□□□□ -0.01
ATG4B-209ENST00000425239 TMEM191CA6NGB0 347 aa15.01□□□□□ -0.01
ATG4B-209ENST00000425239 ARHGAP42A6NI28 874 aa15.01□□□□□ -0.01
ATG4B-209ENST00000425239 LGALS16A8MUM7 142 aa15.01□□□□□ -0.01
ATG4B-209ENST00000425239 A8MX80 341 aa15.01□□□□□ -0.01
ATG4B-209ENST00000425239 EIF3CLB5ME19 914 aaKnown RBP15.01□□□□□ -0.01
ATG4B-209ENST00000425239 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.01□□□□□ -0.01
ATG4B-209ENST00000425239 HTRA2O43464 458 aaPredicted RBP15.01□□□□□ -0.01
ATG4B-209ENST00000425239 SLC28A2O43868 658 aa15.01□□□□□ -0.01
ATG4B-209ENST00000425239 JMJD7P0C870 316 aa15.01□□□□□ -0.01
ATG4B-209ENST00000425239 SERPINA4P29622 427 aa15.01□□□□□ -0.01
ATG4B-209ENST00000425239 KCNC4Q03721 635 aa15.01□□□□□ -0.01
ATG4B-209ENST00000425239 BCL2L1Q07817 233 aa15.01□□□□□ -0.01
ATG4B-209ENST00000425239 IL10RBQ08334 325 aa15.01□□□□□ -0.01
ATG4B-209ENST00000425239 SLC10A7Q0GE19 358 aa15.01□□□□□ -0.01
ATG4B-209ENST00000425239 RFTN1Q14699 578 aaPredicted RBP15.01□□□□□ -0.01
ATG4B-209ENST00000425239 NCAPHQ15003 741 aa15.01□□□□□ -0.01
ATG4B-209ENST00000425239 FKBP15Q5T1M5 1219 aa15.01□□□□□ -0.01
ATG4B-209ENST00000425239 CLEC17AQ6ZS10 378 aa15.01□□□□□ -0.01
ATG4B-209ENST00000425239 RFX8Q6ZV50 586 aa15.01□□□□□ -0.01
ATG4B-209ENST00000425239 JAMLQ86YT9 394 aa15.01□□□□□ -0.01
ATG4B-209ENST00000425239 NEK11Q8NG66 645 aa15.01□□□□□ -0.01
ATG4B-209ENST00000425239 HTR3CQ8WXA8 447 aa15.01□□□□□ -0.01
ATG4B-209ENST00000425239 USP7Q93009 1102 aa15.01□□□□□ -0.01
ATG4B-209ENST00000425239 EIF3CQ99613 913 aaKnown RBP15.01□□□□□ -0.01
ATG4B-209ENST00000425239 SEMA3CQ99985 751 aa15.01□□□□□ -0.01
ATG4B-209ENST00000425239 SNRNP25Q9BV90 132 aaKnown RBP15.01□□□□□ -0.01
ATG4B-209ENST00000425239 TEX101Q9BY14 249 aa15.01□□□□□ -0.01
ATG4B-209ENST00000425239 TRIM7Q9C029 511 aa15.01□□□□□ -0.01
ATG4B-209ENST00000425239 CYP4F12Q9HCS2 524 aa15.01□□□□□ -0.01
ATG4B-209ENST00000425239 DONSONQ9NYP3 566 aa15.01□□□□□ -0.01
ATG4B-209ENST00000425239 B4GALT6Q9UBX8 382 aa15.01□□□□□ -0.01
ATG4B-209ENST00000425239 SDK2Q58EX2 2172 aa15.01□□□□□ -0.01
ATG4B-209ENST00000425239 A0A1W2PQC6 194 aa15□□□□□ -0.01
ATG4B-209ENST00000425239 PRSS38A1L453 326 aa15□□□□□ -0.01
ATG4B-209ENST00000425239 CACNB4O00305 520 aaPredicted RBP15□□□□□ -0.01
ATG4B-209ENST00000425239 EEF2KO00418 725 aaKnown RBP15□□□□□ -0.01
ATG4B-209ENST00000425239 TERTO14746 1132 aaKnown RBP15□□□□□ -0.01
ATG4B-209ENST00000425239 ELFN1P0C7U0 828 aa15□□□□□ -0.01
ATG4B-209ENST00000425239 CCL4P13236 92 aa15□□□□□ -0.01
ATG4B-209ENST00000425239 CCNB1P14635 433 aa15□□□□□ -0.01
ATG4B-209ENST00000425239 CD1CP29017 333 aa15□□□□□ -0.01
ATG4B-209ENST00000425239 HCAR3P49019 387 aa15□□□□□ -0.01
ATG4B-209ENST00000425239 OR1D5P58170 312 aa15□□□□□ -0.01
ATG4B-209ENST00000425239 POLR2LP62875 67 aaKnown RBP15□□□□□ -0.01
ATG4B-209ENST00000425239 DPYSQ14117 519 aa15□□□□□ -0.01
ATG4B-209ENST00000425239 DCUN1D2Q6PH85 259 aa15□□□□□ -0.01
ATG4B-209ENST00000425239 USP53Q70EK8 1073 aa15□□□□□ -0.01
ATG4B-209ENST00000425239 PGBD5Q8N414 524 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms