RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 TSEN2Q8NCE0 465 aaKnown RBP13.05□□□□□ -0.32
VRK3-203ENST00000424804 TPCN2Q8NHX9 752 aa13.05□□□□□ -0.32
VRK3-203ENST00000424804 TTC9Q92623 222 aa13.05□□□□□ -0.32
VRK3-203ENST00000424804 GRAMD1AQ96CP6 724 aa13.05□□□□□ -0.32
VRK3-203ENST00000424804 ECHDC3Q96DC8 303 aa13.05□□□□□ -0.32
VRK3-203ENST00000424804 CCDC3Q9BQI4 270 aa13.05□□□□□ -0.32
VRK3-203ENST00000424804 DPH1Q9BZG8 443 aa13.05□□□□□ -0.32
VRK3-203ENST00000424804 SEMA4CQ9C0C4 833 aa13.05□□□□□ -0.32
VRK3-203ENST00000424804 SP110Q9HB58 689 aa13.05□□□□□ -0.32
VRK3-203ENST00000424804 DONSONQ9NYP3 566 aa13.05□□□□□ -0.32
VRK3-203ENST00000424804 CWC15Q9P013 229 aaKnown RBP13.05□□□□□ -0.32
VRK3-203ENST00000424804 UBA2Q9UBT2 640 aaPredicted RBP13.05□□□□□ -0.32
VRK3-203ENST00000424804 PADI4Q9UM07 663 aa13.05□□□□□ -0.32
VRK3-203ENST00000424804 NENFQ9UMX5 172 aa13.05□□□□□ -0.32
VRK3-203ENST00000424804 ASH1LQ9NR48 2969 aaKnown RBP13.05□□□□□ -0.32
VRK3-203ENST00000424804 A0A1W2PQM1 296 aa13.04□□□□□ -0.32
VRK3-203ENST00000424804 ARHGAP42A6NI28 874 aa13.04□□□□□ -0.32
VRK3-203ENST00000424804 EIF3CLB5ME19 914 aaKnown RBP13.04□□□□□ -0.32
VRK3-203ENST00000424804 TRAFD1O14545 582 aaPredicted RBP13.04□□□□□ -0.32
VRK3-203ENST00000424804 ANXA6P08133 673 aa13.04□□□□□ -0.32
VRK3-203ENST00000424804 TNNT1P13805 278 aa13.04□□□□□ -0.32
VRK3-203ENST00000424804 AMPD1P23109 780 aa13.04□□□□□ -0.32
VRK3-203ENST00000424804 LIG3P49916 1009 aa13.04□□□□□ -0.32
VRK3-203ENST00000424804 CDH6P55285 790 aa13.04□□□□□ -0.32
VRK3-203ENST00000424804 NFATC4Q14934 902 aa13.04□□□□□ -0.32
VRK3-203ENST00000424804 OGFOD3Q6PK18 319 aa13.04□□□□□ -0.32
VRK3-203ENST00000424804 LVRNQ6Q4G3 990 aa13.04□□□□□ -0.32
VRK3-203ENST00000424804 B3GNT8Q7Z7M8 397 aa13.04□□□□□ -0.32
VRK3-203ENST00000424804 SRLQ86TD4 932 aa13.04□□□□□ -0.32
VRK3-203ENST00000424804 CBARPQ8N350 705 aaPredicted RBP13.04□□□□□ -0.32
VRK3-203ENST00000424804 NPWQ8N729 165 aa13.04□□□□□ -0.32
VRK3-203ENST00000424804 NIPA2Q8N8Q9 360 aa13.04□□□□□ -0.32
VRK3-203ENST00000424804 TC2NQ8N9U0 490 aa13.04□□□□□ -0.32
VRK3-203ENST00000424804 KYQ8NBH2 561 aa13.04□□□□□ -0.32
VRK3-203ENST00000424804 GPR156Q8NFN8 814 aa13.04□□□□□ -0.32
VRK3-203ENST00000424804 MRFAP1L1Q96HT8 127 aa13.04□□□□□ -0.32
VRK3-203ENST00000424804 ZNF641Q96N77 438 aaPredicted RBP13.04□□□□□ -0.32
VRK3-203ENST00000424804 EIF3CQ99613 913 aaKnown RBP13.04□□□□□ -0.32
VRK3-203ENST00000424804 SLC13A1Q9BZW2 595 aa13.04□□□□□ -0.32
VRK3-203ENST00000424804 EVA1BQ9NVM1 165 aa13.04□□□□□ -0.32
VRK3-203ENST00000424804 UVRAGQ9P2Y5 699 aa13.04□□□□□ -0.32
VRK3-203ENST00000424804 OR1A2Q9Y585 309 aa13.04□□□□□ -0.32
VRK3-203ENST00000424804 CFAP69A5D8W1 941 aa13.03□□□□□ -0.32
VRK3-203ENST00000424804 TMEM202A6NGA9 273 aa13.03□□□□□ -0.32
VRK3-203ENST00000424804 EIF4E1BA6NMX2 242 aaKnown RBP13.03□□□□□ -0.32
VRK3-203ENST00000424804 ERVH48-1M5A8F1 160 aa13.03□□□□□ -0.32
VRK3-203ENST00000424804 KLK10O43240 276 aa13.03□□□□□ -0.32
VRK3-203ENST00000424804 PROSCO94903 275 aa13.03□□□□□ -0.32
VRK3-203ENST00000424804 PEX11BO96011 259 aa13.03□□□□□ -0.32
VRK3-203ENST00000424804 PLA2G2AP14555 144 aa13.03□□□□□ -0.32
VRK3-203ENST00000424804 TRIM23P36406 574 aa13.03□□□□□ -0.32
VRK3-203ENST00000424804 SRP54P61011 504 aaKnown RBP13.03□□□□□ -0.32
VRK3-203ENST00000424804 CCL7P80098 99 aa13.03□□□□□ -0.32
VRK3-203ENST00000424804 SLC25A11Q02978 314 aaKnown RBP13.03□□□□□ -0.32
VRK3-203ENST00000424804 ELP6Q0PNE2 266 aa13.03□□□□□ -0.32
VRK3-203ENST00000424804 MMRN1Q13201 1228 aa13.03□□□□□ -0.32
VRK3-203ENST00000424804 ATP13A4Q4VNC1 1196 aa13.03□□□□□ -0.32
VRK3-203ENST00000424804 ARHGAP40Q5TG30 622 aa13.03□□□□□ -0.32
VRK3-203ENST00000424804 TMCO3Q6UWJ1 677 aa13.03□□□□□ -0.32
VRK3-203ENST00000424804 ENPP7Q6UWV6 458 aa13.03□□□□□ -0.32
VRK3-203ENST00000424804 LIPIQ6XZB0 460 aa13.03□□□□□ -0.32
VRK3-203ENST00000424804 HID1Q8IV36 788 aa13.03□□□□□ -0.32
VRK3-203ENST00000424804 PSTKQ8IV42 348 aaKnown RBP13.03□□□□□ -0.32
VRK3-203ENST00000424804 FSTL5Q8N475 847 aaPredicted RBP13.03□□□□□ -0.32
VRK3-203ENST00000424804 PAF1Q8N7H5 531 aa13.03□□□□□ -0.32
VRK3-203ENST00000424804 SPC24Q8NBT2 197 aa13.03□□□□□ -0.32
VRK3-203ENST00000424804 KCTD6Q8NC69 237 aa13.03□□□□□ -0.32
VRK3-203ENST00000424804 PCDH19Q8TAB3 1148 aa13.03□□□□□ -0.32
VRK3-203ENST00000424804 SLC35G2Q8TBE7 412 aa13.03□□□□□ -0.32
VRK3-203ENST00000424804 KCNE4Q8WWG9 221 aa13.03□□□□□ -0.32
VRK3-203ENST00000424804 OR1E3Q8WZA6 343 aa13.03□□□□□ -0.32
VRK3-203ENST00000424804 NAT6Q93015 286 aa13.03□□□□□ -0.32
VRK3-203ENST00000424804 WBP1Q96G27 269 aa13.03□□□□□ -0.32
VRK3-203ENST00000424804 RBM15Q96T37 977 aaKnown RBP eCLIP13.03□□□□□ -0.32
VRK3-203ENST00000424804 ANP32EQ9BTT0 268 aa13.03□□□□□ -0.32
VRK3-203ENST00000424804 C1QTNF7Q9BXJ2 289 aa13.03□□□□□ -0.32
VRK3-203ENST00000424804 PCDH18Q9HCL0 1135 aa13.03□□□□□ -0.32
VRK3-203ENST00000424804 THSD1Q9NS62 852 aa13.03□□□□□ -0.32
VRK3-203ENST00000424804 ATP8A1Q9Y2Q0 1164 aa13.03□□□□□ -0.32
VRK3-203ENST00000424804 DGKBQ9Y6T7 804 aa13.03□□□□□ -0.32
VRK3-203ENST00000424804 NOBOXO60393 691 aa13.02□□□□□ -0.33
VRK3-203ENST00000424804 FUCA1P04066 466 aa13.02□□□□□ -0.33
VRK3-203ENST00000424804 CYLC1P35663 651 aaPredicted RBP13.02□□□□□ -0.33
VRK3-203ENST00000424804 MAGEA1P43355 309 aa13.02□□□□□ -0.33
VRK3-203ENST00000424804 NOP2P46087 812 aaKnown RBP13.02□□□□□ -0.33
VRK3-203ENST00000424804 RPIAP49247 311 aa13.02□□□□□ -0.33
VRK3-203ENST00000424804 ZNF135P52742 658 aaPredicted RBP13.02□□□□□ -0.33
VRK3-203ENST00000424804 TMPRSS3P57727 454 aa13.02□□□□□ -0.33
VRK3-203ENST00000424804 TAS2R40P59535 323 aa13.02□□□□□ -0.33
VRK3-203ENST00000424804 CFHR1Q03591 330 aa13.02□□□□□ -0.33
VRK3-203ENST00000424804 NSUN2Q08J23 767 aaKnown RBP eCLIP13.02□□□□□ -0.33
VRK3-203ENST00000424804 CLN3Q13286 438 aa13.02□□□□□ -0.33
VRK3-203ENST00000424804 MTM1Q13496 603 aa13.02□□□□□ -0.33
VRK3-203ENST00000424804 TCEA2Q15560 299 aa13.02□□□□□ -0.33
VRK3-203ENST00000424804 DPYSL2Q16555 572 aa13.02□□□□□ -0.33
VRK3-203ENST00000424804 BRAT1Q6PJG6 821 aa13.02□□□□□ -0.33
VRK3-203ENST00000424804 TMPRSS9Q7Z410 1059 aa13.02□□□□□ -0.33
VRK3-203ENST00000424804 POLNQ7Z5Q5 900 aa13.02□□□□□ -0.33
VRK3-203ENST00000424804 SDR16C5Q8N3Y7 309 aa13.02□□□□□ -0.33
VRK3-203ENST00000424804 ARL10Q8N8L6 244 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms