RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 LY6DQ14210 128 aa16.21■□□□□ 0.19
COL18A1-205ENST00000423214 ACOX1Q15067 660 aa16.21■□□□□ 0.19
COL18A1-205ENST00000423214 ASIC2Q16515 512 aa16.21■□□□□ 0.19
COL18A1-205ENST00000423214 TSR1Q2NL82 804 aaKnown RBP16.21■□□□□ 0.19
COL18A1-205ENST00000423214 TMCO4Q5TGY1 634 aa16.21■□□□□ 0.19
COL18A1-205ENST00000423214 KIAA1614Q5VZ46 1190 aa16.21■□□□□ 0.19
COL18A1-205ENST00000423214 PLEKHA7Q6IQ23 1121 aa16.21■□□□□ 0.19
COL18A1-205ENST00000423214 ARHGAP36Q6ZRI8 547 aa16.21■□□□□ 0.19
COL18A1-205ENST00000423214 NYAP1Q6ZVC0 841 aa16.21■□□□□ 0.19
COL18A1-205ENST00000423214 ARHGAP12Q8IWW6 846 aa16.21■□□□□ 0.19
COL18A1-205ENST00000423214 NPWQ8N729 165 aa16.21■□□□□ 0.19
COL18A1-205ENST00000423214 Q8N9G6 341 aaPredicted RBP16.21■□□□□ 0.19
COL18A1-205ENST00000423214 FAM46DQ8NEK8 389 aa16.21■□□□□ 0.19
COL18A1-205ENST00000423214 GPR156Q8NFN8 814 aa16.21■□□□□ 0.19
COL18A1-205ENST00000423214 TTC9Q92623 222 aa16.21■□□□□ 0.19
COL18A1-205ENST00000423214 FUBP1Q96AE4 644 aaKnown RBP16.21■□□□□ 0.19
COL18A1-205ENST00000423214 ZNF653Q96CK0 615 aa16.21■□□□□ 0.19
COL18A1-205ENST00000423214 ECHDC3Q96DC8 303 aa16.21■□□□□ 0.19
COL18A1-205ENST00000423214 CCNL2Q96S94 520 aaPredicted RBP16.21■□□□□ 0.19
COL18A1-205ENST00000423214 ZWILCHQ9H900 591 aa16.21■□□□□ 0.19
COL18A1-205ENST00000423214 CYP4F12Q9HCS2 524 aa16.21■□□□□ 0.19
COL18A1-205ENST00000423214 MRPL40Q9NQ50 206 aaKnown RBP16.21■□□□□ 0.19
COL18A1-205ENST00000423214 PISDQ9UG56 409 aa16.21■□□□□ 0.19
COL18A1-205ENST00000423214 SEPT3Q9UH03 358 aa16.21■□□□□ 0.19
COL18A1-205ENST00000423214 SCINQ9Y6U3 715 aa16.21■□□□□ 0.19
COL18A1-205ENST00000423214 A0A1W2PQM1 296 aa16.2■□□□□ 0.18
COL18A1-205ENST00000423214 GLB1P16278 677 aa16.2■□□□□ 0.18
COL18A1-205ENST00000423214 NFKBIAP25963 317 aa16.2■□□□□ 0.18
COL18A1-205ENST00000423214 MIPP30301 263 aa16.2■□□□□ 0.18
COL18A1-205ENST00000423214 SLC5A2P31639 672 aa16.2■□□□□ 0.18
COL18A1-205ENST00000423214 NSUN2Q08J23 767 aaKnown RBP eCLIP16.2■□□□□ 0.18
COL18A1-205ENST00000423214 LBRQ14739 615 aaKnown RBP16.2■□□□□ 0.18
COL18A1-205ENST00000423214 MAP9Q49MG5 647 aa16.2■□□□□ 0.18
COL18A1-205ENST00000423214 C14orf28Q4W4Y0 310 aa16.2■□□□□ 0.18
COL18A1-205ENST00000423214 CERCAMQ5T4B2 595 aa16.2■□□□□ 0.18
COL18A1-205ENST00000423214 AFMIDQ63HM1 303 aa16.2■□□□□ 0.18
COL18A1-205ENST00000423214 KCTD16Q68DU8 428 aa16.2■□□□□ 0.18
COL18A1-205ENST00000423214 IRF2BP2Q7Z5L9 587 aa16.2■□□□□ 0.18
COL18A1-205ENST00000423214 PSTKQ8IV42 348 aaKnown RBP16.2■□□□□ 0.18
COL18A1-205ENST00000423214 KIAA1524Q8TCG1 905 aa16.2■□□□□ 0.18
COL18A1-205ENST00000423214 PDCD6IPQ8WUM4 868 aaKnown RBP16.2■□□□□ 0.18
COL18A1-205ENST00000423214 NUS1Q96E22 293 aa16.2■□□□□ 0.18
COL18A1-205ENST00000423214 TRIM11Q96F44 468 aa16.2■□□□□ 0.18
COL18A1-205ENST00000423214 DPEP2Q9H4A9 486 aa16.2■□□□□ 0.18
COL18A1-205ENST00000423214 SUDS3Q9H7L9 328 aaPredicted RBP16.2■□□□□ 0.18
COL18A1-205ENST00000423214 CNOT8Q9UFF9 292 aaKnown RBP16.2■□□□□ 0.18
COL18A1-205ENST00000423214 ATXN7L1Q9ULK2 861 aaPredicted RBP16.2■□□□□ 0.18
COL18A1-205ENST00000423214 SSUH2Q9Y2M2 353 aa16.2■□□□□ 0.18
COL18A1-205ENST00000423214 LOXL2Q9Y4K0 774 aa16.2■□□□□ 0.18
COL18A1-205ENST00000423214 PCDHGA7Q9Y5G6 932 aa16.2■□□□□ 0.18
COL18A1-205ENST00000423214 SDK2Q58EX2 2172 aa16.19■□□□□ 0.18
COL18A1-205ENST00000423214 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.19■□□□□ 0.18
COL18A1-205ENST00000423214 PRSS38A1L453 326 aa16.19■□□□□ 0.18
COL18A1-205ENST00000423214 SMTNL1A8MU46 457 aa16.19■□□□□ 0.18
COL18A1-205ENST00000423214 A8MX80 341 aa16.19■□□□□ 0.18
COL18A1-205ENST00000423214 H3BRJ5 948 aa16.19■□□□□ 0.18
COL18A1-205ENST00000423214 PDE2AO00408 941 aaPredicted RBP16.19■□□□□ 0.18
COL18A1-205ENST00000423214 TNFRSF10CO14798 259 aa16.19■□□□□ 0.18
COL18A1-205ENST00000423214 SOCS5O75159 536 aa16.19■□□□□ 0.18
COL18A1-205ENST00000423214 LRCH4O75427 683 aa16.19■□□□□ 0.18
COL18A1-205ENST00000423214 CPP00450 1065 aa16.19■□□□□ 0.18
COL18A1-205ENST00000423214 HGFP14210 728 aa16.19■□□□□ 0.18
COL18A1-205ENST00000423214 ARL4AP40617 200 aa16.19■□□□□ 0.18
COL18A1-205ENST00000423214 ZNF165P49910 485 aa16.19■□□□□ 0.18
COL18A1-205ENST00000423214 ARHGEF7Q14155 803 aa16.19■□□□□ 0.18
COL18A1-205ENST00000423214 SPECC1LQ69YQ0 1117 aa16.19■□□□□ 0.18
COL18A1-205ENST00000423214 SPRED1Q7Z699 444 aa16.19■□□□□ 0.18
COL18A1-205ENST00000423214 BBS5Q8N3I7 341 aa16.19■□□□□ 0.18
COL18A1-205ENST00000423214 LZTR1Q8N653 840 aa16.19■□□□□ 0.18
COL18A1-205ENST00000423214 FNIP1Q8TF40 1166 aa16.19■□□□□ 0.18
COL18A1-205ENST00000423214 ZNF599Q96NL3 588 aa16.19■□□□□ 0.18
COL18A1-205ENST00000423214 PSKH2Q96QS6 385 aa16.19■□□□□ 0.18
COL18A1-205ENST00000423214 BPIFA3Q9BQP9 254 aa16.19■□□□□ 0.18
COL18A1-205ENST00000423214 SYT11Q9BT88 431 aa16.19■□□□□ 0.18
COL18A1-205ENST00000423214 TMEM168Q9H0V1 697 aa16.19■□□□□ 0.18
COL18A1-205ENST00000423214 B4GALT6Q9UBX8 382 aa16.19■□□□□ 0.18
COL18A1-205ENST00000423214 APPL1Q9UKG1 709 aa16.19■□□□□ 0.18
COL18A1-205ENST00000423214 FLNBO75369 2602 aaKnown RBP16.18■□□□□ 0.18
COL18A1-205ENST00000423214 A0A1W2PQ67 120 aa16.18■□□□□ 0.18
COL18A1-205ENST00000423214 SYCE3A1L190 88 aa16.18■□□□□ 0.18
COL18A1-205ENST00000423214 GOLGA6CA6NDK9 693 aa16.18■□□□□ 0.18
COL18A1-205ENST00000423214 GOLGA6BA6NDN3 693 aa16.18■□□□□ 0.18
COL18A1-205ENST00000423214 TMEM191CA6NGB0 347 aa16.18■□□□□ 0.18
COL18A1-205ENST00000423214 J3QKU1 62 aa16.18■□□□□ 0.18
COL18A1-205ENST00000423214 AGRPO00253 132 aa16.18■□□□□ 0.18
COL18A1-205ENST00000423214 TRAFD1O14545 582 aaPredicted RBP16.18■□□□□ 0.18
COL18A1-205ENST00000423214 NOBOXO60393 691 aa16.18■□□□□ 0.18
COL18A1-205ENST00000423214 HOXC4P09017 264 aaPredicted RBP16.18■□□□□ 0.18
COL18A1-205ENST00000423214 GOLGA6DP0CG33 693 aa16.18■□□□□ 0.18
COL18A1-205ENST00000423214 MYCLP1P12525 358 aaPredicted RBP16.18■□□□□ 0.18
COL18A1-205ENST00000423214 PNLIPP16233 465 aa16.18■□□□□ 0.18
COL18A1-205ENST00000423214 HSPA9P38646 679 aaKnown RBP16.18■□□□□ 0.18
COL18A1-205ENST00000423214 DPYSQ14117 519 aa16.18■□□□□ 0.18
COL18A1-205ENST00000423214 FILIP1LQ4L180 1135 aa16.18■□□□□ 0.18
COL18A1-205ENST00000423214 PHF19Q5T6S3 580 aa16.18■□□□□ 0.18
COL18A1-205ENST00000423214 DENND2CQ68D51 928 aa16.18■□□□□ 0.18
COL18A1-205ENST00000423214 PNCKQ6P2M8 343 aa16.18■□□□□ 0.18
COL18A1-205ENST00000423214 TMCO3Q6UWJ1 677 aa16.18■□□□□ 0.18
COL18A1-205ENST00000423214 CYP4V2Q6ZWL3 525 aaPredicted RBP16.18■□□□□ 0.18
COL18A1-205ENST00000423214 ARFGAP1Q8N6T3 406 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms