RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 OPTCQ9UBM4 332 aa9.77□□□□□ -0.85
CMSS1-201ENST00000421999 KLHL3Q9UH77 587 aa9.77□□□□□ -0.85
CMSS1-201ENST00000421999 ARL2BPQ9Y2Y0 163 aa9.77□□□□□ -0.85
CMSS1-201ENST00000421999 TRIM43BA6NCK2 446 aa9.77□□□□□ -0.85
CMSS1-201ENST00000421999 TRPC5OSA6NMA1 111 aa9.77□□□□□ -0.85
CMSS1-201ENST00000421999 QSOX1O00391 747 aa9.77□□□□□ -0.85
CMSS1-201ENST00000421999 INSIG1O15503 277 aa9.77□□□□□ -0.85
CMSS1-201ENST00000421999 FKBP9O95302 570 aa9.77□□□□□ -0.85
CMSS1-201ENST00000421999 RAB33AQ14088 237 aa9.77□□□□□ -0.85
CMSS1-201ENST00000421999 CYP2A13Q16696 494 aa9.77□□□□□ -0.85
CMSS1-201ENST00000421999 MS4A13Q5J8X5 152 aa9.77□□□□□ -0.85
CMSS1-201ENST00000421999 DRICH1Q6PGQ1 229 aaPredicted RBP9.77□□□□□ -0.85
CMSS1-201ENST00000421999 FAM43BQ6ZT52 329 aaPredicted RBP9.77□□□□□ -0.85
CMSS1-201ENST00000421999 FKBP9P1Q75LS8 142 aa9.77□□□□□ -0.85
CMSS1-201ENST00000421999 PQLC3Q8N755 202 aa9.77□□□□□ -0.85
CMSS1-201ENST00000421999 TRIM43Q96BQ3 446 aaPredicted RBP9.77□□□□□ -0.85
CMSS1-201ENST00000421999 RHBGQ9H310 441 aa9.77□□□□□ -0.85
CMSS1-201ENST00000421999 SH3BP4Q9P0V3 963 aa9.77□□□□□ -0.85
CMSS1-201ENST00000421999 ZNF840PA6NDX5 716 aa9.77□□□□□ -0.85
CMSS1-201ENST00000421999 LEFTY2O00292 366 aa9.77□□□□□ -0.85
CMSS1-201ENST00000421999 ALOX15BO15296 676 aa9.77□□□□□ -0.85
CMSS1-201ENST00000421999 PCCBP05166 539 aa9.77□□□□□ -0.85
CMSS1-201ENST00000421999 DHPSP49366 369 aaPredicted RBP9.77□□□□□ -0.85
CMSS1-201ENST00000421999 NDST2P52849 883 aa9.77□□□□□ -0.85
CMSS1-201ENST00000421999 DSG1Q02413 1049 aa9.77□□□□□ -0.85
CMSS1-201ENST00000421999 IL10RBQ08334 325 aa9.77□□□□□ -0.85
CMSS1-201ENST00000421999 ILF3Q12906 894 aaKnown RBP eCLIP9.77□□□□□ -0.85
CMSS1-201ENST00000421999 PFKFB4Q16877 469 aa9.77□□□□□ -0.85
CMSS1-201ENST00000421999 ITPRIPL2Q3MIP1 535 aa9.77□□□□□ -0.85
CMSS1-201ENST00000421999 C16orf46Q6P387 395 aa9.77□□□□□ -0.85
CMSS1-201ENST00000421999 Q6ZVU0 165 aa9.77□□□□□ -0.85
CMSS1-201ENST00000421999 MILR1Q7Z6M3 343 aa9.77□□□□□ -0.85
CMSS1-201ENST00000421999 CAMK1DQ8IU85 385 aa9.77□□□□□ -0.85
CMSS1-201ENST00000421999 SLC22A9Q8IVM8 553 aa9.77□□□□□ -0.85
CMSS1-201ENST00000421999 RBFAQ8N0V3 343 aa9.77□□□□□ -0.85
CMSS1-201ENST00000421999 CXorf38Q8TB03 319 aa9.77□□□□□ -0.85
CMSS1-201ENST00000421999 ZFYVE19Q96K21 471 aa9.77□□□□□ -0.85
CMSS1-201ENST00000421999 IL12RB2Q99665 862 aa9.77□□□□□ -0.85
CMSS1-201ENST00000421999 CLSTN3Q9BQT9 956 aa9.77□□□□□ -0.85
CMSS1-201ENST00000421999 THUMPD3Q9BV44 507 aaKnown RBP9.77□□□□□ -0.85
CMSS1-201ENST00000421999 IL1RAPL1Q9NZN1 696 aa9.77□□□□□ -0.85
CMSS1-201ENST00000421999 SLC27A6Q9Y2P4 619 aa9.77□□□□□ -0.85
CMSS1-201ENST00000421999 USH1CQ9Y6N9 552 aa9.77□□□□□ -0.85
CMSS1-201ENST00000421999 DOCK5Q9H7D0 1870 aa9.76□□□□□ -0.85
CMSS1-201ENST00000421999 PSME4Q14997 1843 aa9.76□□□□□ -0.85
CMSS1-201ENST00000421999 GLYATL1P3A0A0U1RQE8 302 aa9.76□□□□□ -0.85
CMSS1-201ENST00000421999 A0A1W2PQ67 120 aa9.76□□□□□ -0.85
CMSS1-201ENST00000421999 PRMT5O14744 637 aaPredicted RBP9.76□□□□□ -0.85
CMSS1-201ENST00000421999 ASLP04424 464 aa9.76□□□□□ -0.85
CMSS1-201ENST00000421999 HOXB2P14652 356 aa9.76□□□□□ -0.85
CMSS1-201ENST00000421999 TCN1P20061 433 aaPredicted RBP9.76□□□□□ -0.85
CMSS1-201ENST00000421999 ACVRL1P37023 503 aa9.76□□□□□ -0.85
CMSS1-201ENST00000421999 ANKRD20A4Q4UJ75 823 aa9.76□□□□□ -0.85
CMSS1-201ENST00000421999 RNASEH2BQ5TBB1 312 aaKnown RBP9.76□□□□□ -0.85
CMSS1-201ENST00000421999 PHYKPLQ8IUZ5 450 aa9.76□□□□□ -0.85
CMSS1-201ENST00000421999 SUGP1Q8IWZ8 645 aaKnown RBP9.76□□□□□ -0.85
CMSS1-201ENST00000421999 ERP27Q96DN0 273 aa9.76□□□□□ -0.85
CMSS1-201ENST00000421999 TBATAQ96M53 351 aa9.76□□□□□ -0.85
CMSS1-201ENST00000421999 SLC25A51Q9H1U9 297 aa9.76□□□□□ -0.85
CMSS1-201ENST00000421999 MID1IP1Q9NPA3 183 aa9.76□□□□□ -0.85
CMSS1-201ENST00000421999 MRPL40Q9NQ50 206 aaKnown RBP9.76□□□□□ -0.85
CMSS1-201ENST00000421999 AHSPQ9NZD4 102 aa9.76□□□□□ -0.85
CMSS1-201ENST00000421999 SELENONQ9NZV5 590 aa9.76□□□□□ -0.85
CMSS1-201ENST00000421999 CXXC1Q9P0U4 656 aaPredicted RBP9.76□□□□□ -0.85
CMSS1-201ENST00000421999 AURKCQ9UQB9 309 aa9.76□□□□□ -0.85
CMSS1-201ENST00000421999 FAM32AQ9Y421 112 aaKnown RBP9.76□□□□□ -0.85
CMSS1-201ENST00000421999 OR2AG2A6NM03 316 aa9.76□□□□□ -0.85
CMSS1-201ENST00000421999 CHUKO15111 745 aa9.76□□□□□ -0.85
CMSS1-201ENST00000421999 CD3EAPO15446 510 aaKnown RBP9.76□□□□□ -0.85
CMSS1-201ENST00000421999 TRIM13O60858 407 aa9.76□□□□□ -0.85
CMSS1-201ENST00000421999 GCATO75600 419 aa9.76□□□□□ -0.85
CMSS1-201ENST00000421999 MPOP05164 745 aa9.76□□□□□ -0.85
CMSS1-201ENST00000421999 EPCAMP16422 314 aa9.76□□□□□ -0.85
CMSS1-201ENST00000421999 LSP1P33241 339 aa9.76□□□□□ -0.85
CMSS1-201ENST00000421999 PRIM2P49643 509 aa9.76□□□□□ -0.85
CMSS1-201ENST00000421999 PLA2G4EQ3MJ16 856 aa9.76□□□□□ -0.85
CMSS1-201ENST00000421999 SEL1L3Q68CR1 1132 aa9.76□□□□□ -0.85
CMSS1-201ENST00000421999 TAF8Q7Z7C8 310 aa9.76□□□□□ -0.85
CMSS1-201ENST00000421999 HID1Q8IV36 788 aa9.76□□□□□ -0.85
CMSS1-201ENST00000421999 OR52K2Q8NGK3 314 aa9.76□□□□□ -0.85
CMSS1-201ENST00000421999 OTUB1Q96FW1 271 aaPredicted RBP9.76□□□□□ -0.85
CMSS1-201ENST00000421999 NSUN3Q9H649 340 aaKnown RBP9.76□□□□□ -0.85
CMSS1-201ENST00000421999 LRRC4CQ9HCJ2 640 aa9.76□□□□□ -0.85
CMSS1-201ENST00000421999 COMMD8Q9NX08 183 aa9.76□□□□□ -0.85
CMSS1-201ENST00000421999 NDE1Q9NXR1 346 aa9.76□□□□□ -0.85
CMSS1-201ENST00000421999 KPNA5O15131 536 aa9.76□□□□□ -0.85
CMSS1-201ENST00000421999 ZSCAN9O15535 394 aaPredicted RBP9.76□□□□□ -0.85
CMSS1-201ENST00000421999 SRLQ86TD4 932 aa9.76□□□□□ -0.85
CMSS1-201ENST00000421999 SLC41A1Q8IVJ1 513 aa9.76□□□□□ -0.85
CMSS1-201ENST00000421999 NKAPQ8N5F7 415 aaKnown RBP9.76□□□□□ -0.85
CMSS1-201ENST00000421999 STAG3L4Q8TBR4 150 aa9.76□□□□□ -0.85
CMSS1-201ENST00000421999 TCP10LQ8TDR4 215 aa9.76□□□□□ -0.85
CMSS1-201ENST00000421999 MAGED4Q96JG8 741 aa9.76□□□□□ -0.85
CMSS1-201ENST00000421999 TEKT5Q96M29 485 aa9.76□□□□□ -0.85
CMSS1-201ENST00000421999 CCDC138Q96M89 665 aa9.76□□□□□ -0.85
CMSS1-201ENST00000421999 HPS4Q9NQG7 708 aa9.76□□□□□ -0.85
CMSS1-201ENST00000421999 MARCH5Q9NX47 278 aa9.76□□□□□ -0.85
CMSS1-201ENST00000421999 GRHL1Q9NZI5 618 aa9.76□□□□□ -0.85
CMSS1-201ENST00000421999 TCRBV9S1A1TA0A576 114 aa9.75□□□□□ -0.85
CMSS1-201ENST00000421999 TTC24A2A3L6 582 aaPredicted RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms