RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 OR2AP1Q8NGE2 309 aa9.03□□□□□ -0.96
TRIM39-206ENST00000420746 SPATA3Q8NHX4 192 aa9.03□□□□□ -0.96
TRIM39-206ENST00000420746 SEMA4DQ92854 862 aa9.03□□□□□ -0.96
TRIM39-206ENST00000420746 FUBP1Q96AE4 644 aaKnown RBP9.03□□□□□ -0.96
TRIM39-206ENST00000420746 KLHL32Q96NJ5 620 aa9.03□□□□□ -0.96
TRIM39-206ENST00000420746 WRAP53Q9BUR4 548 aaKnown RBP9.03□□□□□ -0.96
TRIM39-206ENST00000420746 NUDT9Q9BW91 350 aa9.03□□□□□ -0.96
TRIM39-206ENST00000420746 PANK2Q9BZ23 570 aa9.03□□□□□ -0.96
TRIM39-206ENST00000420746 TM6SF2Q9BZW4 377 aa9.03□□□□□ -0.96
TRIM39-206ENST00000420746 KCTD10Q9H3F6 313 aa9.03□□□□□ -0.96
TRIM39-206ENST00000420746 MAGEF1Q9HAY2 307 aa9.03□□□□□ -0.96
TRIM39-206ENST00000420746 RAB20Q9NX57 234 aa9.03□□□□□ -0.96
TRIM39-206ENST00000420746 PRSS38A1L453 326 aa9.02□□□□□ -0.97
TRIM39-206ENST00000420746 CFAP69A5D8W1 941 aa9.02□□□□□ -0.97
TRIM39-206ENST00000420746 TMEM200CA6NKL6 621 aa9.02□□□□□ -0.97
TRIM39-206ENST00000420746 M0QYV0 167 aa9.02□□□□□ -0.97
TRIM39-206ENST00000420746 NDUFA10O95299 355 aa9.02□□□□□ -0.97
TRIM39-206ENST00000420746 ADCY5O95622 1261 aa9.02□□□□□ -0.97
TRIM39-206ENST00000420746 PCCBP05166 539 aa9.02□□□□□ -0.97
TRIM39-206ENST00000420746 KRT13P13646 458 aa9.02□□□□□ -0.97
TRIM39-206ENST00000420746 LPOP22079 712 aaPredicted RBP9.02□□□□□ -0.97
TRIM39-206ENST00000420746 GKP32189 559 aa9.02□□□□□ -0.97
TRIM39-206ENST00000420746 GEMIN4P57678 1058 aaKnown RBP9.02□□□□□ -0.97
TRIM39-206ENST00000420746 SNRPD1P62314 119 aaKnown RBP9.02□□□□□ -0.97
TRIM39-206ENST00000420746 YWHAZP63104 245 aaKnown RBP9.02□□□□□ -0.97
TRIM39-206ENST00000420746 ARF5P84085 180 aa9.02□□□□□ -0.97
TRIM39-206ENST00000420746 CHAF1BQ13112 559 aa9.02□□□□□ -0.97
TRIM39-206ENST00000420746 ADAM9Q13443 819 aa9.02□□□□□ -0.97
TRIM39-206ENST00000420746 CUL2Q13617 745 aa9.02□□□□□ -0.97
TRIM39-206ENST00000420746 POLD3Q15054 466 aaPredicted RBP9.02□□□□□ -0.97
TRIM39-206ENST00000420746 NFIL3Q16649 462 aa9.02□□□□□ -0.97
TRIM39-206ENST00000420746 ALFQ53S48 1182 aa9.02□□□□□ -0.97
TRIM39-206ENST00000420746 VWA2Q5GFL6 755 aa9.02□□□□□ -0.97
TRIM39-206ENST00000420746 ACBD5Q5T8D3 534 aaPredicted RBP9.02□□□□□ -0.97
TRIM39-206ENST00000420746 ANKRD40Q6AI12 368 aa9.02□□□□□ -0.97
TRIM39-206ENST00000420746 GDPD4Q6W3E5 623 aa9.02□□□□□ -0.97
TRIM39-206ENST00000420746 ZNF683Q8IZ20 524 aa9.02□□□□□ -0.97
TRIM39-206ENST00000420746 UBR7Q8N806 425 aa9.02□□□□□ -0.97
TRIM39-206ENST00000420746 PDILTQ8N807 584 aa9.02□□□□□ -0.97
TRIM39-206ENST00000420746 HCAR2Q8TDS4 363 aa9.02□□□□□ -0.97
TRIM39-206ENST00000420746 CT55Q8WUE5 264 aa9.02□□□□□ -0.97
TRIM39-206ENST00000420746 MED15Q96RN5 788 aa9.02□□□□□ -0.97
TRIM39-206ENST00000420746 BRD8Q9H0E9 1235 aa9.02□□□□□ -0.97
TRIM39-206ENST00000420746 FAM204AQ9H8W3 233 aa9.02□□□□□ -0.97
TRIM39-206ENST00000420746 LHX9Q9NQ69 397 aa9.02□□□□□ -0.97
TRIM39-206ENST00000420746 GPR83Q9NYM4 423 aa9.02□□□□□ -0.97
TRIM39-206ENST00000420746 OSGIN2Q9Y236 505 aa9.02□□□□□ -0.97
TRIM39-206ENST00000420746 FCF1Q9Y324 198 aaKnown RBP9.02□□□□□ -0.97
TRIM39-206ENST00000420746 CLIC4Q9Y696 253 aa9.02□□□□□ -0.97
TRIM39-206ENST00000420746 CHD5Q8TDI0 1954 aa9.01□□□□□ -0.97
TRIM39-206ENST00000420746 PKDREJQ9NTG1 2253 aa9.01□□□□□ -0.97
TRIM39-206ENST00000420746 IGLV3-10A0A075B6K4 115 aa9.01□□□□□ -0.97
TRIM39-206ENST00000420746 DRGXA6NNA5 263 aa9.01□□□□□ -0.97
TRIM39-206ENST00000420746 A8MU76 341 aa9.01□□□□□ -0.97
TRIM39-206ENST00000420746 KRIT1O00522 736 aa9.01□□□□□ -0.97
TRIM39-206ENST00000420746 GRID2O43424 1007 aa9.01□□□□□ -0.97
TRIM39-206ENST00000420746 PAGE1O75459 146 aa9.01□□□□□ -0.97
TRIM39-206ENST00000420746 KIAA0754O94854 1291 aa9.01□□□□□ -0.97
TRIM39-206ENST00000420746 CD160O95971 181 aa9.01□□□□□ -0.97
TRIM39-206ENST00000420746 EDN3P14138 238 aa9.01□□□□□ -0.97
TRIM39-206ENST00000420746 HTR1EP28566 365 aa9.01□□□□□ -0.97
TRIM39-206ENST00000420746 PTPN4P29074 926 aa9.01□□□□□ -0.97
TRIM39-206ENST00000420746 MXI1P50539 228 aa9.01□□□□□ -0.97
TRIM39-206ENST00000420746 PITX1P78337 314 aaPredicted RBP9.01□□□□□ -0.97
TRIM39-206ENST00000420746 CDK17Q00537 523 aa9.01□□□□□ -0.97
TRIM39-206ENST00000420746 DNM1Q05193 864 aaKnown RBP9.01□□□□□ -0.97
TRIM39-206ENST00000420746 LAMB3Q13751 1172 aa9.01□□□□□ -0.97
TRIM39-206ENST00000420746 MYLK3Q32MK0 819 aa9.01□□□□□ -0.97
TRIM39-206ENST00000420746 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.01□□□□□ -0.97
TRIM39-206ENST00000420746 LRRC73Q5JTD7 316 aa9.01□□□□□ -0.97
TRIM39-206ENST00000420746 SNAP47Q5SQN1 464 aa9.01□□□□□ -0.97
TRIM39-206ENST00000420746 VWA5B1Q5TIE3 1220 aa9.01□□□□□ -0.97
TRIM39-206ENST00000420746 CYB5D1Q6P9G0 228 aa9.01□□□□□ -0.97
TRIM39-206ENST00000420746 IGFL3Q6UXB1 125 aa9.01□□□□□ -0.97
TRIM39-206ENST00000420746 RYBPQ8N488 228 aaPredicted RBP9.01□□□□□ -0.97
TRIM39-206ENST00000420746 OR7D4Q8NG98 312 aa9.01□□□□□ -0.97
TRIM39-206ENST00000420746 OR6K2Q8NGY2 324 aa9.01□□□□□ -0.97
TRIM39-206ENST00000420746 STK32AQ8WU08 396 aa9.01□□□□□ -0.97
TRIM39-206ENST00000420746 ITLN2Q8WWU7 325 aaPredicted RBP9.01□□□□□ -0.97
TRIM39-206ENST00000420746 PATE1Q8WXA2 126 aa9.01□□□□□ -0.97
TRIM39-206ENST00000420746 TFAP2BQ92481 460 aa9.01□□□□□ -0.97
TRIM39-206ENST00000420746 ARHGEF2Q92974 986 aaKnown RBP9.01□□□□□ -0.97
TRIM39-206ENST00000420746 RELTQ969Z4 430 aa9.01□□□□□ -0.97
TRIM39-206ENST00000420746 SLC38A3Q99624 504 aa9.01□□□□□ -0.97
TRIM39-206ENST00000420746 EPB41L1Q9H4G0 881 aa9.01□□□□□ -0.97
TRIM39-206ENST00000420746 THAP9Q9H5L6 903 aa9.01□□□□□ -0.97
TRIM39-206ENST00000420746 CARS2Q9HA77 564 aaKnown RBP9.01□□□□□ -0.97
TRIM39-206ENST00000420746 ATP13A1Q9HD20 1204 aa9.01□□□□□ -0.97
TRIM39-206ENST00000420746 DDIT4Q9NX09 232 aa9.01□□□□□ -0.97
TRIM39-206ENST00000420746 COQ6Q9Y2Z9 468 aa9.01□□□□□ -0.97
TRIM39-206ENST00000420746 ARHGEF17Q96PE2 2063 aaPredicted RBP9.01□□□□□ -0.97
TRIM39-206ENST00000420746 MN1Q10571 1320 aaPredicted RBP9.01□□□□□ -0.97
TRIM39-206ENST00000420746 RASA4BC9J798 803 aa9□□□□□ -0.97
TRIM39-206ENST00000420746 E2F3O00716 465 aa9□□□□□ -0.97
TRIM39-206ENST00000420746 TOX3O15405 576 aaPredicted RBP9□□□□□ -0.97
TRIM39-206ENST00000420746 KCNN4O15554 427 aa9□□□□□ -0.97
TRIM39-206ENST00000420746 RASA4O43374 803 aa9□□□□□ -0.97
TRIM39-206ENST00000420746 GLI1P08151 1106 aa9□□□□□ -0.97
TRIM39-206ENST00000420746 FGF5P12034 268 aa9□□□□□ -0.97
TRIM39-206ENST00000420746 ITIH2P19823 946 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms