RNA–Protein interactions for RNA: ENST00000420101.6

SEMA4D-204, Transcript of semaphorin 4D, humanhuman

TSL 1 (best) BASIC

Gene SEMA4D, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-204ENST00000420101 SEMA3BQ13214 749 aa14.87□□□□□ -0.03
SEMA4D-204ENST00000420101 TMEM240Q5SV17 173 aa14.87□□□□□ -0.03
SEMA4D-204ENST00000420101 AMIGO2Q86SJ2 522 aa14.87□□□□□ -0.03
SEMA4D-204ENST00000420101 CPSF7Q8N684 471 aaKnown RBP14.87□□□□□ -0.03
SEMA4D-204ENST00000420101 TMEM102Q8N9M5 508 aaPredicted RBP14.87□□□□□ -0.03
SEMA4D-204ENST00000420101 HIPK4Q8NE63 616 aa14.87□□□□□ -0.03
SEMA4D-204ENST00000420101 CFAP36Q96G28 342 aa14.87□□□□□ -0.03
SEMA4D-204ENST00000420101 DOK1Q99704 481 aa14.87□□□□□ -0.03
SEMA4D-204ENST00000420101 OLFM1Q99784 485 aa14.87□□□□□ -0.03
SEMA4D-204ENST00000420101 CATSPERBQ9H7T0 1116 aa14.87□□□□□ -0.03
SEMA4D-204ENST00000420101 TMEM9Q9P0T7 183 aa14.87□□□□□ -0.03
SEMA4D-204ENST00000420101 CXXC1Q9P0U4 656 aaPredicted RBP14.87□□□□□ -0.03
SEMA4D-204ENST00000420101 YIPF1Q9Y548 306 aa14.87□□□□□ -0.03
SEMA4D-204ENST00000420101 TLL1O43897 1013 aa14.86□□□□□ -0.03
SEMA4D-204ENST00000420101 ABLIM3O94929 683 aa14.86□□□□□ -0.03
SEMA4D-204ENST00000420101 GSRP00390 522 aa14.86□□□□□ -0.03
SEMA4D-204ENST00000420101 OCM2P0CE71 109 aa14.86□□□□□ -0.03
SEMA4D-204ENST00000420101 OCMP0CE72 109 aaPredicted RBP14.86□□□□□ -0.03
SEMA4D-204ENST00000420101 ZNF26P17031 533 aaPredicted RBP14.86□□□□□ -0.03
SEMA4D-204ENST00000420101 NCF2P19878 526 aaPredicted RBP14.86□□□□□ -0.03
SEMA4D-204ENST00000420101 PSMD8P48556 350 aa14.86□□□□□ -0.03
SEMA4D-204ENST00000420101 PLD1Q13393 1074 aa14.86□□□□□ -0.03
SEMA4D-204ENST00000420101 MOGQ16653 247 aa14.86□□□□□ -0.03
SEMA4D-204ENST00000420101 KRT80Q6KB66 452 aa14.86□□□□□ -0.03
SEMA4D-204ENST00000420101 PACRGLQ8N7B6 248 aa14.86□□□□□ -0.03
SEMA4D-204ENST00000420101 PDZD8Q8NEN9 1154 aa14.86□□□□□ -0.03
SEMA4D-204ENST00000420101 CDKL2Q92772 493 aa14.86□□□□□ -0.03
SEMA4D-204ENST00000420101 CGREF1Q99674 301 aa14.86□□□□□ -0.03
SEMA4D-204ENST00000420101 YIPF2Q9BWQ6 316 aa14.86□□□□□ -0.03
SEMA4D-204ENST00000420101 ANKRD60Q9BZ19 345 aa14.86□□□□□ -0.03
SEMA4D-204ENST00000420101 PRDM12Q9H4Q4 367 aa14.86□□□□□ -0.03
SEMA4D-204ENST00000420101 CCSER2Q9H7U1 834 aa14.86□□□□□ -0.03
SEMA4D-204ENST00000420101 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.86□□□□□ -0.03
SEMA4D-204ENST00000420101 IPO11Q9UI26 975 aaKnown RBP14.86□□□□□ -0.03
SEMA4D-204ENST00000420101 PCDHA11Q9Y5I1 949 aa14.86□□□□□ -0.03
SEMA4D-204ENST00000420101 PATJQ8NI35 1801 aa14.86□□□□□ -0.03
SEMA4D-204ENST00000420101 COL4A6Q14031 1691 aa14.85□□□□□ -0.03
SEMA4D-204ENST00000420101 TRIM64BA6NI03 449 aa14.85□□□□□ -0.03
SEMA4D-204ENST00000420101 F5H423 210 aaPredicted RBP14.85□□□□□ -0.03
SEMA4D-204ENST00000420101 GOLGA8TH3BQL2 631 aa14.85□□□□□ -0.03
SEMA4D-204ENST00000420101 TPSB2P20231 275 aa14.85□□□□□ -0.03
SEMA4D-204ENST00000420101 S100A1P23297 94 aa14.85□□□□□ -0.03
SEMA4D-204ENST00000420101 GLDCP23378 1020 aa14.85□□□□□ -0.03
SEMA4D-204ENST00000420101 MAGEA3P43357 314 aa14.85□□□□□ -0.03
SEMA4D-204ENST00000420101 ENTPD1P49961 510 aa14.85□□□□□ -0.03
SEMA4D-204ENST00000420101 PRKAA2P54646 552 aa14.85□□□□□ -0.03
SEMA4D-204ENST00000420101 EPHB3P54753 998 aa14.85□□□□□ -0.03
SEMA4D-204ENST00000420101 CREMQ03060 361 aa14.85□□□□□ -0.03
SEMA4D-204ENST00000420101 TWF1Q12792 350 aa14.85□□□□□ -0.03
SEMA4D-204ENST00000420101 EIF4EBP2Q13542 120 aaPredicted RBP14.85□□□□□ -0.03
SEMA4D-204ENST00000420101 RAB33AQ14088 237 aa14.85□□□□□ -0.03
SEMA4D-204ENST00000420101 TGFBIQ15582 683 aa14.85□□□□□ -0.03
SEMA4D-204ENST00000420101 TRIP4Q15650 581 aaPredicted RBP14.85□□□□□ -0.03
SEMA4D-204ENST00000420101 TPSAB1Q15661 275 aa14.85□□□□□ -0.03
SEMA4D-204ENST00000420101 C6orf52Q5T4I8 152 aa14.85□□□□□ -0.03
SEMA4D-204ENST00000420101 DCDC5Q6ZRR9 648 aa14.85□□□□□ -0.03
SEMA4D-204ENST00000420101 FRA10AC1Q70Z53 315 aa14.85□□□□□ -0.03
SEMA4D-204ENST00000420101 UBE2Q1Q7Z7E8 422 aa14.85□□□□□ -0.03
SEMA4D-204ENST00000420101 PDPRQ8NCN5 879 aa14.85□□□□□ -0.03
SEMA4D-204ENST00000420101 EME1Q96AY2 570 aa14.85□□□□□ -0.03
SEMA4D-204ENST00000420101 EFHD2Q96C19 240 aaPredicted RBP14.85□□□□□ -0.03
SEMA4D-204ENST00000420101 CELF6Q96J87 481 aaKnown RBP14.85□□□□□ -0.03
SEMA4D-204ENST00000420101 CEP295NLQ96MC4 621 aa14.85□□□□□ -0.03
SEMA4D-204ENST00000420101 CDK5RAP1Q96SZ6 601 aaKnown RBP14.85□□□□□ -0.03
SEMA4D-204ENST00000420101 SORT1Q99523 831 aa14.85□□□□□ -0.03
SEMA4D-204ENST00000420101 ZNF395Q9H8N7 513 aaPredicted RBP14.85□□□□□ -0.03
SEMA4D-204ENST00000420101 TRPM5Q9NZQ8 1165 aa14.85□□□□□ -0.03
SEMA4D-204ENST00000420101 MID2Q9UJV3 735 aa14.85□□□□□ -0.03
SEMA4D-204ENST00000420101 HS3ST4Q9Y661 456 aa14.85□□□□□ -0.03
SEMA4D-204ENST00000420101 SLC30A1Q9Y6M5 507 aa14.85□□□□□ -0.03
SEMA4D-204ENST00000420101 MYO16Q9Y6X6 1858 aa14.85□□□□□ -0.03
SEMA4D-204ENST00000420101 TRIM64A6NGJ6 449 aa14.85□□□□□ -0.03
SEMA4D-204ENST00000420101 KCNU1A8MYU2 1149 aa14.85□□□□□ -0.03
SEMA4D-204ENST00000420101 E9PAM4 449 aa14.85□□□□□ -0.03
SEMA4D-204ENST00000420101 SLCO1B7G3V0H7 640 aa14.85□□□□□ -0.03
SEMA4D-204ENST00000420101 DFFAO00273 331 aa14.85□□□□□ -0.03
SEMA4D-204ENST00000420101 NCAM2O15394 837 aa14.85□□□□□ -0.03
SEMA4D-204ENST00000420101 ALDH1A2O94788 518 aa14.85□□□□□ -0.03
SEMA4D-204ENST00000420101 ATP5C1P36542 298 aaKnown RBP14.85□□□□□ -0.03
SEMA4D-204ENST00000420101 C21orf59P57076 290 aa14.85□□□□□ -0.03
SEMA4D-204ENST00000420101 ZBTB17Q13105 803 aa14.85□□□□□ -0.03
SEMA4D-204ENST00000420101 ELMSAN1Q6PJG2 1045 aa14.85□□□□□ -0.03
SEMA4D-204ENST00000420101 MAVSQ7Z434 540 aa14.85□□□□□ -0.03
SEMA4D-204ENST00000420101 HERC6Q8IVU3 1022 aa14.85□□□□□ -0.03
SEMA4D-204ENST00000420101 TP53INP2Q8IXH6 220 aa14.85□□□□□ -0.03
SEMA4D-204ENST00000420101 P2RY11Q96G91 374 aa14.85□□□□□ -0.03
SEMA4D-204ENST00000420101 RAD9AQ99638 391 aa14.85□□□□□ -0.03
SEMA4D-204ENST00000420101 EBNA1BP2Q99848 306 aaKnown RBP14.85□□□□□ -0.03
SEMA4D-204ENST00000420101 EFHD1Q9BUP0 239 aa14.85□□□□□ -0.03
SEMA4D-204ENST00000420101 TTLL2Q9BWV7 592 aa14.85□□□□□ -0.03
SEMA4D-204ENST00000420101 CDH19Q9H159 772 aa14.85□□□□□ -0.03
SEMA4D-204ENST00000420101 MTIF3Q9H2K0 278 aaKnown RBP14.85□□□□□ -0.03
SEMA4D-204ENST00000420101 EFCAB1Q9HAE3 211 aa14.85□□□□□ -0.03
SEMA4D-204ENST00000420101 UTP6Q9NYH9 597 aaKnown RBP14.85□□□□□ -0.03
SEMA4D-204ENST00000420101 SEPT3Q9UH03 358 aa14.85□□□□□ -0.03
SEMA4D-204ENST00000420101 FAM32AQ9Y421 112 aaKnown RBP14.85□□□□□ -0.03
SEMA4D-204ENST00000420101 RAD54BQ9Y620 910 aa14.85□□□□□ -0.03
SEMA4D-204ENST00000420101 CXorf49A8MYA2 514 aaPredicted RBP14.84□□□□□ -0.03
SEMA4D-204ENST00000420101 BOLA2-SMG1P6H3BVE0 249 aa14.84□□□□□ -0.03
SEMA4D-204ENST00000420101 RNF103O00237 685 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms