RNA–Protein interactions for RNA: ENST00000420058.1

NFE4-201, Transcript of nuclear factor, erythroid 4, humanhuman

TSL 1 (best)

Gene NFE4, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4-201ENST00000420058 PHF19Q5T6S3 580 aa14.29□□□□□ -0.12
NFE4-201ENST00000420058 BRAT1Q6PJG6 821 aa14.29□□□□□ -0.12
NFE4-201ENST00000420058 SLFN11Q7Z7L1 901 aa14.29□□□□□ -0.12
NFE4-201ENST00000420058 DNAAF5Q86Y56 855 aa14.29□□□□□ -0.12
NFE4-201ENST00000420058 PTRH1Q86Y79 214 aaKnown RBP14.29□□□□□ -0.12
NFE4-201ENST00000420058 ZSCAN1Q8NBB4 408 aa14.29□□□□□ -0.12
NFE4-201ENST00000420058 RCBTB1Q8NDN9 531 aa14.29□□□□□ -0.12
NFE4-201ENST00000420058 ATL2Q8NHH9 583 aa14.29□□□□□ -0.12
NFE4-201ENST00000420058 GPBAR1Q8TDU6 330 aa14.29□□□□□ -0.12
NFE4-201ENST00000420058 PTCD2Q8WV60 388 aaKnown RBP14.29□□□□□ -0.12
NFE4-201ENST00000420058 ECHDC3Q96DC8 303 aa14.29□□□□□ -0.12
NFE4-201ENST00000420058 C11orf70Q9BRQ4 267 aa14.29□□□□□ -0.12
NFE4-201ENST00000420058 DPEP2Q9H4A9 486 aa14.29□□□□□ -0.12
NFE4-201ENST00000420058 LRRC19Q9H756 370 aa14.29□□□□□ -0.12
NFE4-201ENST00000420058 CYP4F12Q9HCS2 524 aa14.29□□□□□ -0.12
NFE4-201ENST00000420058 PCDHB11Q9Y5F2 797 aa14.29□□□□□ -0.12
NFE4-201ENST00000420058 PCDHGA3Q9Y5H0 932 aa14.29□□□□□ -0.12
NFE4-201ENST00000420058 ITPR2Q14571 2701 aa14.29□□□□□ -0.12
NFE4-201ENST00000420058 MYO9AB2RTY4 2548 aa14.29□□□□□ -0.12
NFE4-201ENST00000420058 IGHV5-10-1A0A0J9YXX1 117 aa14.28□□□□□ -0.12
NFE4-201ENST00000420058 ANKRD36A6QL64 1941 aa14.28□□□□□ -0.12
NFE4-201ENST00000420058 B4DGG1 531 aa14.28□□□□□ -0.12
NFE4-201ENST00000420058 PRAMEF11O60813 436 aa14.28□□□□□ -0.12
NFE4-201ENST00000420058 CPNE6O95741 557 aa14.28□□□□□ -0.12
NFE4-201ENST00000420058 KRT3P12035 628 aa14.28□□□□□ -0.12
NFE4-201ENST00000420058 CSNK1DP48730 415 aa14.28□□□□□ -0.12
NFE4-201ENST00000420058 CDR2Q01850 454 aa14.28□□□□□ -0.12
NFE4-201ENST00000420058 UBAP2LQ14157 1087 aaKnown RBP14.28□□□□□ -0.12
NFE4-201ENST00000420058 IGFBP7Q16270 282 aa14.28□□□□□ -0.12
NFE4-201ENST00000420058 SKIDA1Q1XH10 827 aa14.28□□□□□ -0.12
NFE4-201ENST00000420058 AMZ1Q400G9 498 aa14.28□□□□□ -0.12
NFE4-201ENST00000420058 PARP15Q460N3 678 aa14.28□□□□□ -0.12
NFE4-201ENST00000420058 HSP90AA4PQ58FG1 418 aa14.28□□□□□ -0.12
NFE4-201ENST00000420058 ERAP2Q6P179 960 aa14.28□□□□□ -0.12
NFE4-201ENST00000420058 PNCKQ6P2M8 343 aa14.28□□□□□ -0.12
NFE4-201ENST00000420058 PIM3Q86V86 326 aa14.28□□□□□ -0.12
NFE4-201ENST00000420058 ZNF354CQ86Y25 554 aa14.28□□□□□ -0.12
NFE4-201ENST00000420058 CBARPQ8N350 705 aaPredicted RBP14.28□□□□□ -0.12
NFE4-201ENST00000420058 MLKLQ8NB16 471 aa14.28□□□□□ -0.12
NFE4-201ENST00000420058 MSANTD4Q8NCY6 345 aa14.28□□□□□ -0.12
NFE4-201ENST00000420058 ZNF564Q8TBZ8 553 aaPredicted RBP14.28□□□□□ -0.12
NFE4-201ENST00000420058 TAAR9Q96RI9 348 aa14.28□□□□□ -0.12
NFE4-201ENST00000420058 SPRY4Q9C004 299 aa14.28□□□□□ -0.12
NFE4-201ENST00000420058 EPN3Q9H201 632 aa14.28□□□□□ -0.12
NFE4-201ENST00000420058 GANQ9H2C0 597 aa14.28□□□□□ -0.12
NFE4-201ENST00000420058 ADNPQ9H2P0 1102 aa14.28□□□□□ -0.12
NFE4-201ENST00000420058 UBA2Q9UBT2 640 aaPredicted RBP14.28□□□□□ -0.12
NFE4-201ENST00000420058 FZD10Q9ULW2 581 aa14.28□□□□□ -0.12
NFE4-201ENST00000420058 STMND1H3BQB6 276 aa14.27□□□□□ -0.13
NFE4-201ENST00000420058 CACNB4O00305 520 aaPredicted RBP14.27□□□□□ -0.13
NFE4-201ENST00000420058 TRAFD1O14545 582 aaPredicted RBP14.27□□□□□ -0.13
NFE4-201ENST00000420058 GFPT2O94808 682 aa14.27□□□□□ -0.13
NFE4-201ENST00000420058 CEACAM5P06731 702 aa14.27□□□□□ -0.13
NFE4-201ENST00000420058 PRKCSHP14314 528 aaPredicted RBP14.27□□□□□ -0.13
NFE4-201ENST00000420058 UGT1A3P35503 534 aa14.27□□□□□ -0.13
NFE4-201ENST00000420058 GSCP56915 257 aaPredicted RBP14.27□□□□□ -0.13
NFE4-201ENST00000420058 GRM3Q14832 879 aa14.27□□□□□ -0.13
NFE4-201ENST00000420058 SRLQ86TD4 932 aa14.27□□□□□ -0.13
NFE4-201ENST00000420058 ZNF677Q86XU0 584 aa14.27□□□□□ -0.13
NFE4-201ENST00000420058 TSEN2Q8NCE0 465 aaKnown RBP14.27□□□□□ -0.13
NFE4-201ENST00000420058 PATE1Q8WXA2 126 aa14.27□□□□□ -0.13
NFE4-201ENST00000420058 TUBGCP5Q96RT8 1024 aa14.27□□□□□ -0.13
NFE4-201ENST00000420058 NCAPGQ9BPX3 1015 aa14.27□□□□□ -0.13
NFE4-201ENST00000420058 CDH19Q9H159 772 aa14.27□□□□□ -0.13
NFE4-201ENST00000420058 B3GALT1Q9Y5Z6 326 aa14.27□□□□□ -0.13
NFE4-201ENST00000420058 PRSS38A1L453 326 aa14.26□□□□□ -0.13
NFE4-201ENST00000420058 SIGLEC16A6NMB1 481 aa14.26□□□□□ -0.13
NFE4-201ENST00000420058 A8MX80 341 aa14.26□□□□□ -0.13
NFE4-201ENST00000420058 HGSO14964 777 aaPredicted RBP14.26□□□□□ -0.13
NFE4-201ENST00000420058 EPHB6O15197 1021 aa14.26□□□□□ -0.13
NFE4-201ENST00000420058 PPM1DO15297 605 aa14.26□□□□□ -0.13
NFE4-201ENST00000420058 CCP110O43303 1012 aa14.26□□□□□ -0.13
NFE4-201ENST00000420058 CREB3O43889 395 aa14.26□□□□□ -0.13
NFE4-201ENST00000420058 ECEL1O95672 775 aa14.26□□□□□ -0.13
NFE4-201ENST00000420058 CCNB1P14635 433 aa14.26□□□□□ -0.13
NFE4-201ENST00000420058 LIFP15018 202 aa14.26□□□□□ -0.13
NFE4-201ENST00000420058 GPD1P21695 349 aa14.26□□□□□ -0.13
NFE4-201ENST00000420058 AK4P27144 223 aaPredicted RBP14.26□□□□□ -0.13
NFE4-201ENST00000420058 ALDH4A1P30038 563 aa14.26□□□□□ -0.13
NFE4-201ENST00000420058 STAT1P42224 750 aa14.26□□□□□ -0.13
NFE4-201ENST00000420058 KLK7P49862 253 aa14.26□□□□□ -0.13
NFE4-201ENST00000420058 LIMK2P53671 638 aa14.26□□□□□ -0.13
NFE4-201ENST00000420058 POLE2P56282 527 aa14.26□□□□□ -0.13
NFE4-201ENST00000420058 JAM2P57087 298 aa14.26□□□□□ -0.13
NFE4-201ENST00000420058 FOXK1P85037 733 aa14.26□□□□□ -0.13
NFE4-201ENST00000420058 SQSTM1Q13501 440 aa14.26□□□□□ -0.13
NFE4-201ENST00000420058 TMEM164Q5U3C3 297 aa14.26□□□□□ -0.13
NFE4-201ENST00000420058 NKAIN2Q5VXU1 208 aa14.26□□□□□ -0.13
NFE4-201ENST00000420058 BORAQ6PGQ7 559 aa14.26□□□□□ -0.13
NFE4-201ENST00000420058 DPPA4Q7L190 304 aa14.26□□□□□ -0.13
NFE4-201ENST00000420058 CELF6Q96J87 481 aaKnown RBP14.26□□□□□ -0.13
NFE4-201ENST00000420058 CCDC74BQ96LY2 380 aa14.26□□□□□ -0.13
NFE4-201ENST00000420058 COQ10AQ96MF6 247 aa14.26□□□□□ -0.13
NFE4-201ENST00000420058 SLC39A8Q9C0K1 460 aa14.26□□□□□ -0.13
NFE4-201ENST00000420058 SAMSN1Q9NSI8 373 aaKnown RBP14.26□□□□□ -0.13
NFE4-201ENST00000420058 ICE1Q9Y2F5 2266 aa14.26□□□□□ -0.13
NFE4-201ENST00000420058 KELP23276 732 aa14.25□□□□□ -0.13
NFE4-201ENST00000420058 MPSTP25325 297 aa14.25□□□□□ -0.13
NFE4-201ENST00000420058 CSF2RBP32927 897 aa14.25□□□□□ -0.13
NFE4-201ENST00000420058 PAPOLAP51003 745 aaKnown RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms