RNA–Protein interactions for RNA: ENST00000419470.6

SFTPA1-202, Transcript of surfactant protein A1, humanhuman

TSL 1 (best) BASIC

Gene SFTPA1, Length 2,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1-202ENST00000419470 CCDC149Q6ZUS6 474 aa13.39□□□□□ -0.27
SFTPA1-202ENST00000419470 TMEM150AQ86TG1 271 aa13.39□□□□□ -0.27
SFTPA1-202ENST00000419470 TMIGD2Q96BF3 282 aa13.39□□□□□ -0.27
SFTPA1-202ENST00000419470 CGREF1Q99674 301 aa13.39□□□□□ -0.27
SFTPA1-202ENST00000419470 GPATCH1Q9BRR8 931 aaKnown RBP13.39□□□□□ -0.27
SFTPA1-202ENST00000419470 TRPC7Q9HCX4 862 aa13.39□□□□□ -0.27
SFTPA1-202ENST00000419470 PALMDQ9NP74 551 aa13.39□□□□□ -0.27
SFTPA1-202ENST00000419470 XPO7Q9UIA9 1087 aaKnown RBP13.39□□□□□ -0.27
SFTPA1-202ENST00000419470 PRPF19Q9UMS4 504 aaKnown RBP13.39□□□□□ -0.27
SFTPA1-202ENST00000419470 NEU3Q9UQ49 428 aa13.39□□□□□ -0.27
SFTPA1-202ENST00000419470 TSC22D4Q9Y3Q8 395 aa13.39□□□□□ -0.27
SFTPA1-202ENST00000419470 TMEM63AO94886 807 aa13.38□□□□□ -0.27
SFTPA1-202ENST00000419470 C8AP07357 584 aa13.38□□□□□ -0.27
SFTPA1-202ENST00000419470 TFPTP0C1Z6 253 aa13.38□□□□□ -0.27
SFTPA1-202ENST00000419470 ATP5C1P36542 298 aaKnown RBP13.38□□□□□ -0.27
SFTPA1-202ENST00000419470 CLCN4P51793 760 aa13.38□□□□□ -0.27
SFTPA1-202ENST00000419470 TXNL4AP83876 142 aaKnown RBP13.38□□□□□ -0.27
SFTPA1-202ENST00000419470 RING1Q06587 406 aa13.38□□□□□ -0.27
SFTPA1-202ENST00000419470 PAFAH1B3Q15102 231 aaKnown RBP13.38□□□□□ -0.27
SFTPA1-202ENST00000419470 KCTD21Q4G0X4 260 aa13.38□□□□□ -0.27
SFTPA1-202ENST00000419470 MANEALQ5VSG8 457 aa13.38□□□□□ -0.27
SFTPA1-202ENST00000419470 SLC2A7Q6PXP3 512 aa13.38□□□□□ -0.27
SFTPA1-202ENST00000419470 FRMD7Q6ZUT3 714 aa13.38□□□□□ -0.27
SFTPA1-202ENST00000419470 CHPT1Q8WUD6 406 aa13.38□□□□□ -0.27
SFTPA1-202ENST00000419470 TFB1MQ8WVM0 346 aaKnown RBP13.38□□□□□ -0.27
SFTPA1-202ENST00000419470 SERPINI1Q99574 410 aa13.38□□□□□ -0.27
SFTPA1-202ENST00000419470 GDF15Q99988 308 aa13.38□□□□□ -0.27
SFTPA1-202ENST00000419470 SIK2Q9H0K1 926 aa13.38□□□□□ -0.27
SFTPA1-202ENST00000419470 C10orf88Q9H8K7 445 aa13.38□□□□□ -0.27
SFTPA1-202ENST00000419470 ZNF334Q9HCZ1 680 aaPredicted RBP13.38□□□□□ -0.27
SFTPA1-202ENST00000419470 DTLQ9NZJ0 730 aa13.38□□□□□ -0.27
SFTPA1-202ENST00000419470 DNMT3LQ9UJW3 386 aa13.38□□□□□ -0.27
SFTPA1-202ENST00000419470 SLC12A8A0AV02 714 aa13.37□□□□□ -0.27
SFTPA1-202ENST00000419470 COCHO43405 550 aa13.37□□□□□ -0.27
SFTPA1-202ENST00000419470 CLASP2O75122 1294 aaKnown RBP13.37□□□□□ -0.27
SFTPA1-202ENST00000419470 MOCS2O96007 188 aaPredicted RBP13.37□□□□□ -0.27
SFTPA1-202ENST00000419470 FUCA1P04066 466 aa13.37□□□□□ -0.27
SFTPA1-202ENST00000419470 ERCC2P18074 760 aa13.37□□□□□ -0.27
SFTPA1-202ENST00000419470 CDH3P22223 829 aa13.37□□□□□ -0.27
SFTPA1-202ENST00000419470 S100A1P23297 94 aa13.37□□□□□ -0.27
SFTPA1-202ENST00000419470 PBX2P40425 430 aa13.37□□□□□ -0.27
SFTPA1-202ENST00000419470 ELK3P41970 407 aa13.37□□□□□ -0.27
SFTPA1-202ENST00000419470 KPNA1P52294 538 aaPredicted RBP13.37□□□□□ -0.27
SFTPA1-202ENST00000419470 GDF10P55107 478 aa13.37□□□□□ -0.27
SFTPA1-202ENST00000419470 NRG1Q02297 640 aaPredicted RBP13.37□□□□□ -0.27
SFTPA1-202ENST00000419470 KCNC4Q03721 635 aa13.37□□□□□ -0.27
SFTPA1-202ENST00000419470 PDK1Q15118 436 aa13.37□□□□□ -0.27
SFTPA1-202ENST00000419470 CYTH1Q15438 398 aa13.37□□□□□ -0.27
SFTPA1-202ENST00000419470 NANOGNBQ7Z5D8 188 aa13.37□□□□□ -0.27
SFTPA1-202ENST00000419470 GPR180Q86V85 440 aa13.37□□□□□ -0.27
SFTPA1-202ENST00000419470 ARL10Q8N8L6 244 aa13.37□□□□□ -0.27
SFTPA1-202ENST00000419470 HM13Q8TCT9 377 aa13.37□□□□□ -0.27
SFTPA1-202ENST00000419470 PLEKHA8Q96JA3 519 aa13.37□□□□□ -0.27
SFTPA1-202ENST00000419470 C1orf74Q96LT6 269 aa13.37□□□□□ -0.27
SFTPA1-202ENST00000419470 RTKNQ9BST9 563 aa13.37□□□□□ -0.27
SFTPA1-202ENST00000419470 PAIP1Q9H074 479 aaKnown RBP13.37□□□□□ -0.27
SFTPA1-202ENST00000419470 IL21Q9HBE4 155 aa13.37□□□□□ -0.27
SFTPA1-202ENST00000419470 DNAJC28Q9NX36 388 aa13.37□□□□□ -0.27
SFTPA1-202ENST00000419470 SCHIP1Q9P0W5 487 aaPredicted RBP13.37□□□□□ -0.27
SFTPA1-202ENST00000419470 HS3ST4Q9Y661 456 aa13.37□□□□□ -0.27
SFTPA1-202ENST00000419470 H3BNC9 293 aa13.37□□□□□ -0.27
SFTPA1-202ENST00000419470 H3BNH8 94 aa13.37□□□□□ -0.27
SFTPA1-202ENST00000419470 MFSD11O43934 449 aa13.37□□□□□ -0.27
SFTPA1-202ENST00000419470 RFPL1O75677 317 aa13.37□□□□□ -0.27
SFTPA1-202ENST00000419470 MAP3K6O95382 1288 aa13.37□□□□□ -0.27
SFTPA1-202ENST00000419470 BMP10O95393 424 aa13.37□□□□□ -0.27
SFTPA1-202ENST00000419470 C1RP00736 705 aa13.37□□□□□ -0.27
SFTPA1-202ENST00000419470 APOEP02649 317 aa13.37□□□□□ -0.27
SFTPA1-202ENST00000419470 LRG1P02750 347 aa13.37□□□□□ -0.27
SFTPA1-202ENST00000419470 F11P03951 625 aa13.37□□□□□ -0.27
SFTPA1-202ENST00000419470 HOXC13P31276 330 aa13.37□□□□□ -0.27
SFTPA1-202ENST00000419470 HTR7P34969 479 aa13.37□□□□□ -0.27
SFTPA1-202ENST00000419470 RPL22P35268 128 aaKnown RBP13.37□□□□□ -0.27
SFTPA1-202ENST00000419470 MLLT6P55198 1093 aaPredicted RBP13.37□□□□□ -0.27
SFTPA1-202ENST00000419470 C21orf59P57076 290 aa13.37□□□□□ -0.27
SFTPA1-202ENST00000419470 PIK3R6Q5UE93 754 aa13.37□□□□□ -0.27
SFTPA1-202ENST00000419470 PDPK2PQ6A1A2 396 aa13.37□□□□□ -0.27
SFTPA1-202ENST00000419470 ITPRIPL1Q6GPH6 555 aa13.37□□□□□ -0.27
SFTPA1-202ENST00000419470 DARS2Q6PI48 645 aaKnown RBP13.37□□□□□ -0.27
SFTPA1-202ENST00000419470 IGDCC3Q8IVU1 814 aa13.37□□□□□ -0.27
SFTPA1-202ENST00000419470 UNC45BQ8IWX7 931 aa13.37□□□□□ -0.27
SFTPA1-202ENST00000419470 CENPSQ8N2Z9 138 aa13.37□□□□□ -0.27
SFTPA1-202ENST00000419470 DLG3Q92796 817 aa13.37□□□□□ -0.27
SFTPA1-202ENST00000419470 ISOC1Q96CN7 298 aa13.37□□□□□ -0.27
SFTPA1-202ENST00000419470 BTN2A3PQ96KV6 586 aa13.37□□□□□ -0.27
SFTPA1-202ENST00000419470 HEPHQ9BQS7 1158 aa13.37□□□□□ -0.27
SFTPA1-202ENST00000419470 LRRC3Q9BY71 257 aa13.37□□□□□ -0.27
SFTPA1-202ENST00000419470 MYRFQ9Y2G1 1151 aa13.37□□□□□ -0.27
SFTPA1-202ENST00000419470 DNAJC16Q9Y2G8 782 aa13.37□□□□□ -0.27
SFTPA1-202ENST00000419470 TEX264Q9Y6I9 313 aa13.37□□□□□ -0.27
SFTPA1-202ENST00000419470 MYO18AQ92614 2054 aaKnown RBP13.37□□□□□ -0.27
SFTPA1-202ENST00000419470 SHROOM3Q8TF72 1996 aa13.37□□□□□ -0.27
SFTPA1-202ENST00000419470 TCRBV7S3A2A0A539 114 aa13.36□□□□□ -0.27
SFTPA1-202ENST00000419470 H7C0C1 242 aa13.36□□□□□ -0.27
SFTPA1-202ENST00000419470 ESRRBO95718 433 aa13.36□□□□□ -0.27
SFTPA1-202ENST00000419470 CRHR1P34998 444 aa13.36□□□□□ -0.27
SFTPA1-202ENST00000419470 ATP5OP48047 213 aa13.36□□□□□ -0.27
SFTPA1-202ENST00000419470 DEPDC1Q5TB30 811 aa13.36□□□□□ -0.27
SFTPA1-202ENST00000419470 EFCAB3Q8N7B9 438 aa13.36□□□□□ -0.27
SFTPA1-202ENST00000419470 PPP1R14CQ8TAE6 165 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms