RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 PLXNA2O75051 1894 aa9.07□□□□□ -0.96
LINCMD1-201ENST00000418518 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.07□□□□□ -0.96
LINCMD1-201ENST00000418518 CCDC189A1A4V9 331 aa9.07□□□□□ -0.96
LINCMD1-201ENST00000418518 OR51F1A6NGY5 319 aa9.07□□□□□ -0.96
LINCMD1-201ENST00000418518 ANKRD66B4E2M5 251 aa9.07□□□□□ -0.96
LINCMD1-201ENST00000418518 LEFTY2O00292 366 aa9.07□□□□□ -0.96
LINCMD1-201ENST00000418518 HTRA2O43464 458 aaPredicted RBP9.07□□□□□ -0.96
LINCMD1-201ENST00000418518 DLX3O60479 287 aa9.07□□□□□ -0.96
LINCMD1-201ENST00000418518 CCDC22O60826 627 aa9.07□□□□□ -0.96
LINCMD1-201ENST00000418518 SOCS5O75159 536 aa9.07□□□□□ -0.96
LINCMD1-201ENST00000418518 MOSPD3O75425 235 aa9.07□□□□□ -0.96
LINCMD1-201ENST00000418518 PAPLNO95428 1278 aa9.07□□□□□ -0.96
LINCMD1-201ENST00000418518 CBX6O95503 412 aa9.07□□□□□ -0.96
LINCMD1-201ENST00000418518 GLP2RO95838 553 aa9.07□□□□□ -0.96
LINCMD1-201ENST00000418518 PENKP01210 267 aaPredicted RBP9.07□□□□□ -0.96
LINCMD1-201ENST00000418518 CKMP06732 381 aa9.07□□□□□ -0.96
LINCMD1-201ENST00000418518 LTA4HP09960 611 aaKnown RBP9.07□□□□□ -0.96
LINCMD1-201ENST00000418518 SPATA31D3P0C874 917 aa9.07□□□□□ -0.96
LINCMD1-201ENST00000418518 LPOP22079 712 aaPredicted RBP9.07□□□□□ -0.96
LINCMD1-201ENST00000418518 CALB2P22676 271 aa9.07□□□□□ -0.96
LINCMD1-201ENST00000418518 ATP5F1P24539 256 aaPredicted RBP9.07□□□□□ -0.96
LINCMD1-201ENST00000418518 TARSP26639 723 aaKnown RBP9.07□□□□□ -0.96
LINCMD1-201ENST00000418518 AVPR1AP37288 418 aa9.07□□□□□ -0.96
LINCMD1-201ENST00000418518 MAPK8P45983 427 aa9.07□□□□□ -0.96
LINCMD1-201ENST00000418518 GRIA4P48058 902 aa9.07□□□□□ -0.96
LINCMD1-201ENST00000418518 CLCN4P51793 760 aa9.07□□□□□ -0.96
LINCMD1-201ENST00000418518 SLC12A2P55011 1212 aa9.07□□□□□ -0.96
LINCMD1-201ENST00000418518 ERVFC1P60507 584 aa9.07□□□□□ -0.96
LINCMD1-201ENST00000418518 NFKB2Q00653 900 aa9.07□□□□□ -0.96
LINCMD1-201ENST00000418518 TIAL1Q01085 375 aaKnown RBP eCLIP9.07□□□□□ -0.96
LINCMD1-201ENST00000418518 ZBTB16Q05516 673 aa9.07□□□□□ -0.96
LINCMD1-201ENST00000418518 SLC20A2Q08357 652 aa9.07□□□□□ -0.96
LINCMD1-201ENST00000418518 USP4Q13107 963 aa9.07□□□□□ -0.96
LINCMD1-201ENST00000418518 SEMA3AQ14563 771 aa9.07□□□□□ -0.96
LINCMD1-201ENST00000418518 ZNF460Q14592 562 aa9.07□□□□□ -0.96
LINCMD1-201ENST00000418518 FAM83EQ2M2I3 478 aa9.07□□□□□ -0.96
LINCMD1-201ENST00000418518 AGAP9Q5VTM2 703 aa9.07□□□□□ -0.96
LINCMD1-201ENST00000418518 ZNF549Q6P9A3 640 aa9.07□□□□□ -0.96
LINCMD1-201ENST00000418518 SPATA31D4Q6ZUB0 917 aa9.07□□□□□ -0.96
LINCMD1-201ENST00000418518 PIWIL4Q7Z3Z4 852 aaKnown RBP9.07□□□□□ -0.96
LINCMD1-201ENST00000418518 GLT6D1Q7Z4J2 308 aa9.07□□□□□ -0.96
LINCMD1-201ENST00000418518 PTAR1Q7Z6K3 402 aaPredicted RBP9.07□□□□□ -0.96
LINCMD1-201ENST00000418518 TBC1D1Q86TI0 1168 aaPredicted RBP9.07□□□□□ -0.96
LINCMD1-201ENST00000418518 TTC7BQ86TV6 843 aa9.07□□□□□ -0.96
LINCMD1-201ENST00000418518 ALYREFQ86V81 257 aaKnown RBP9.07□□□□□ -0.96
LINCMD1-201ENST00000418518 MFN1Q8IWA4 741 aa9.07□□□□□ -0.96
LINCMD1-201ENST00000418518 BBS7Q8IWZ6 715 aa9.07□□□□□ -0.96
LINCMD1-201ENST00000418518 MAB21L3Q8N8X9 362 aa9.07□□□□□ -0.96
LINCMD1-201ENST00000418518 GPATCH11Q8N954 259 aa9.07□□□□□ -0.96
LINCMD1-201ENST00000418518 MRPL43Q8N983 215 aaKnown RBP9.07□□□□□ -0.96
LINCMD1-201ENST00000418518 LEMD2Q8NC56 503 aa9.07□□□□□ -0.96
LINCMD1-201ENST00000418518 MDGA1Q8NFP4 955 aa9.07□□□□□ -0.96
LINCMD1-201ENST00000418518 OR6P1Q8NGX9 317 aa9.07□□□□□ -0.96
LINCMD1-201ENST00000418518 SPPL3Q8TCT6 385 aa9.07□□□□□ -0.96
LINCMD1-201ENST00000418518 HEXDCQ8WVB3 486 aa9.07□□□□□ -0.96
LINCMD1-201ENST00000418518 BADQ92934 168 aa9.07□□□□□ -0.96
LINCMD1-201ENST00000418518 UTP4Q969X6 686 aaKnown RBP9.07□□□□□ -0.96
LINCMD1-201ENST00000418518 CCDC126Q96EE4 140 aa9.07□□□□□ -0.96
LINCMD1-201ENST00000418518 PRR11Q96HE9 360 aaPredicted RBP9.07□□□□□ -0.96
LINCMD1-201ENST00000418518 EXOC2Q96KP1 924 aa9.07□□□□□ -0.96
LINCMD1-201ENST00000418518 RAB3IPQ96QF0 476 aaPredicted RBP9.07□□□□□ -0.96
LINCMD1-201ENST00000418518 TCF25Q9BQ70 676 aa9.07□□□□□ -0.96
LINCMD1-201ENST00000418518 AARSD1Q9BTE6 412 aaKnown RBP9.07□□□□□ -0.96
LINCMD1-201ENST00000418518 CCDC106Q9BWC9 280 aa9.07□□□□□ -0.96
LINCMD1-201ENST00000418518 SLC46A2Q9BY10 475 aa9.07□□□□□ -0.96
LINCMD1-201ENST00000418518 ADGRE3Q9BY15 652 aa9.07□□□□□ -0.96
LINCMD1-201ENST00000418518 KLC4Q9NSK0 619 aa9.07□□□□□ -0.96
LINCMD1-201ENST00000418518 ZMYM5Q9UJ78 669 aa9.07□□□□□ -0.96
LINCMD1-201ENST00000418518 VPS28Q9UK41 221 aa9.07□□□□□ -0.96
LINCMD1-201ENST00000418518 TRIM33Q9UPN9 1127 aa9.07□□□□□ -0.96
LINCMD1-201ENST00000418518 RUVBL2Q9Y230 463 aaKnown RBP9.07□□□□□ -0.96
LINCMD1-201ENST00000418518 VPS9D1Q9Y2B5 631 aa9.07□□□□□ -0.96
LINCMD1-201ENST00000418518 VWA7Q9Y334 891 aa9.07□□□□□ -0.96
LINCMD1-201ENST00000418518 SH3BP1Q9Y3L3 701 aa9.07□□□□□ -0.96
LINCMD1-201ENST00000418518 RAP2CQ9Y3L5 183 aa9.07□□□□□ -0.96
LINCMD1-201ENST00000418518 KIAA1549LQ6ZVL6 1849 aa9.07□□□□□ -0.96
LINCMD1-201ENST00000418518 PDE4DIPQ5VU43 2346 aa9.06□□□□□ -0.96
LINCMD1-201ENST00000418518 ANKRD12Q6UB98 2062 aa9.06□□□□□ -0.96
LINCMD1-201ENST00000418518 A0A1W2PRU2 124 aa9.06□□□□□ -0.96
LINCMD1-201ENST00000418518 LCHNA4D1U4 455 aa9.06□□□□□ -0.96
LINCMD1-201ENST00000418518 C2orf81A6NN90 581 aa9.06□□□□□ -0.96
LINCMD1-201ENST00000418518 MATN2O00339 956 aa9.06□□□□□ -0.96
LINCMD1-201ENST00000418518 CCL22O00626 93 aa9.06□□□□□ -0.96
LINCMD1-201ENST00000418518 WFS1O76024 890 aa9.06□□□□□ -0.96
LINCMD1-201ENST00000418518 PGLSO95336 258 aa9.06□□□□□ -0.96
LINCMD1-201ENST00000418518 PDHA1P08559 390 aa9.06□□□□□ -0.96
LINCMD1-201ENST00000418518 KRT16P08779 473 aa9.06□□□□□ -0.96
LINCMD1-201ENST00000418518 RBP1P09455 135 aa9.06□□□□□ -0.96
LINCMD1-201ENST00000418518 HNRNPA1P09651 372 aaKnown RBP eCLIP9.06□□□□□ -0.96
LINCMD1-201ENST00000418518 AOC1P19801 751 aa9.06□□□□□ -0.96
LINCMD1-201ENST00000418518 HNRNPH1P31943 449 aaKnown RBP9.06□□□□□ -0.96
LINCMD1-201ENST00000418518 CTNNB1P35222 781 aa9.06□□□□□ -0.96
LINCMD1-201ENST00000418518 CCR2P41597 374 aa9.06□□□□□ -0.96
LINCMD1-201ENST00000418518 ADARP55265 1226 aaKnown RBP9.06□□□□□ -0.96
LINCMD1-201ENST00000418518 CDKN2DP55273 166 aa9.06□□□□□ -0.96
LINCMD1-201ENST00000418518 RHOAP61586 193 aa9.06□□□□□ -0.96
LINCMD1-201ENST00000418518 GALNT1Q10472 559 aaPredicted RBP9.06□□□□□ -0.96
LINCMD1-201ENST00000418518 LMAN2Q12907 356 aa9.06□□□□□ -0.96
LINCMD1-201ENST00000418518 PRKAA1Q13131 559 aa9.06□□□□□ -0.96
LINCMD1-201ENST00000418518 ACAP2Q15057 778 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms