RNA–Protein interactions for RNA: ENST00000418107.2

HLA-DMB-258, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DMB, Length 1,397 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-258ENST00000418107 TTC24A2A3L6 582 aaPredicted RBP13.27□□□□□ -0.29
HLA-DMB-258ENST00000418107 ADAM23O75077 832 aa13.27□□□□□ -0.29
HLA-DMB-258ENST00000418107 CDH16O75309 829 aa13.27□□□□□ -0.29
HLA-DMB-258ENST00000418107 TCEA3O75764 348 aa13.27□□□□□ -0.29
HLA-DMB-258ENST00000418107 CFIP05156 583 aa13.27□□□□□ -0.29
HLA-DMB-258ENST00000418107 POLBP06746 335 aa13.27□□□□□ -0.29
HLA-DMB-258ENST00000418107 SERPINF2P08697 491 aa13.27□□□□□ -0.29
HLA-DMB-258ENST00000418107 PGAM1P18669 254 aa13.27□□□□□ -0.29
HLA-DMB-258ENST00000418107 ITPKAP23677 461 aa13.27□□□□□ -0.29
HLA-DMB-258ENST00000418107 HPDP32754 393 aaPredicted RBP13.27□□□□□ -0.29
HLA-DMB-258ENST00000418107 EIF2DP41214 584 aaKnown RBP13.27□□□□□ -0.29
HLA-DMB-258ENST00000418107 KIR2DL1P43626 348 aaPredicted RBP13.27□□□□□ -0.29
HLA-DMB-258ENST00000418107 GEMIN4P57678 1058 aaKnown RBP13.27□□□□□ -0.29
HLA-DMB-258ENST00000418107 SIM1P81133 766 aaPredicted RBP13.27□□□□□ -0.29
HLA-DMB-258ENST00000418107 CBLBQ13191 982 aa13.27□□□□□ -0.29
HLA-DMB-258ENST00000418107 TMED2Q15363 201 aa13.27□□□□□ -0.29
HLA-DMB-258ENST00000418107 HSF5Q4G112 596 aaPredicted RBP13.27□□□□□ -0.29
HLA-DMB-258ENST00000418107 EOGTQ5NDL2 527 aa13.27□□□□□ -0.29
HLA-DMB-258ENST00000418107 CERCAMQ5T4B2 595 aa13.27□□□□□ -0.29
HLA-DMB-258ENST00000418107 LYSMD4Q5XG99 296 aa13.27□□□□□ -0.29
HLA-DMB-258ENST00000418107 RETSATQ6NUM9 610 aa13.27□□□□□ -0.29
HLA-DMB-258ENST00000418107 LINGO4Q6UY18 593 aa13.27□□□□□ -0.29
HLA-DMB-258ENST00000418107 UNC5AQ6ZN44 842 aa13.27□□□□□ -0.29
HLA-DMB-258ENST00000418107 TMEM25Q86YD3 366 aa13.27□□□□□ -0.29
HLA-DMB-258ENST00000418107 CTAGE3PQ8IX95 158 aa13.27□□□□□ -0.29
HLA-DMB-258ENST00000418107 PGBD3Q8N328 593 aa13.27□□□□□ -0.29
HLA-DMB-258ENST00000418107 RIBC1Q8N443 379 aaPredicted RBP13.27□□□□□ -0.29
HLA-DMB-258ENST00000418107 SH2D3CQ8N5H7 860 aa13.27□□□□□ -0.29
HLA-DMB-258ENST00000418107 ZNF557Q8N988 423 aaPredicted RBP13.27□□□□□ -0.29
HLA-DMB-258ENST00000418107 GSDMBQ8TAX9 411 aa13.27□□□□□ -0.29
HLA-DMB-258ENST00000418107 ZNF419Q96HQ0 510 aaPredicted RBP13.27□□□□□ -0.29
HLA-DMB-258ENST00000418107 WDR83Q9BRX9 315 aaKnown RBP13.27□□□□□ -0.29
HLA-DMB-258ENST00000418107 IL22Q9GZX6 179 aa13.27□□□□□ -0.29
HLA-DMB-258ENST00000418107 ACSS3Q9H6R3 686 aa13.27□□□□□ -0.29
HLA-DMB-258ENST00000418107 PPANQ9NQ55 473 aaKnown RBP13.27□□□□□ -0.29
HLA-DMB-258ENST00000418107 SPHK2Q9NRA0 654 aa13.27□□□□□ -0.29
HLA-DMB-258ENST00000418107 TBK1Q9UHD2 729 aa13.27□□□□□ -0.29
HLA-DMB-258ENST00000418107 NEUROG3Q9Y4Z2 214 aa13.27□□□□□ -0.29
HLA-DMB-258ENST00000418107 ACTL7AQ9Y615 435 aa13.27□□□□□ -0.29
HLA-DMB-258ENST00000418107 TNRC6BQ9UPQ9 1833 aaKnown RBP13.26□□□□□ -0.29
HLA-DMB-258ENST00000418107 MAGEB16A2A368 324 aa13.26□□□□□ -0.29
HLA-DMB-258ENST00000418107 RRP9O43818 475 aaKnown RBP13.26□□□□□ -0.29
HLA-DMB-258ENST00000418107 TMCC1O94876 653 aa13.26□□□□□ -0.29
HLA-DMB-258ENST00000418107 ADH1CP00326 375 aa13.26□□□□□ -0.29
HLA-DMB-258ENST00000418107 ADH5P11766 374 aa13.26□□□□□ -0.29
HLA-DMB-258ENST00000418107 CES1P23141 567 aa13.26□□□□□ -0.29
HLA-DMB-258ENST00000418107 GRIA2P42262 883 aa13.26□□□□□ -0.29
HLA-DMB-258ENST00000418107 SCNN1BP51168 640 aa13.26□□□□□ -0.29
HLA-DMB-258ENST00000418107 MAGOHP61326 146 aaKnown RBP13.26□□□□□ -0.29
HLA-DMB-258ENST00000418107 RHOAP61586 193 aa13.26□□□□□ -0.29
HLA-DMB-258ENST00000418107 SEPT6Q14141 434 aa13.26□□□□□ -0.29
HLA-DMB-258ENST00000418107 CYTH1Q15438 398 aa13.26□□□□□ -0.29
HLA-DMB-258ENST00000418107 LY6G5CQ5SRR4 150 aa13.26□□□□□ -0.29
HLA-DMB-258ENST00000418107 FYB2Q5VWT5 728 aa13.26□□□□□ -0.29
HLA-DMB-258ENST00000418107 SLC23A3Q6PIS1 610 aa13.26□□□□□ -0.29
HLA-DMB-258ENST00000418107 KDELC1Q6UW63 502 aa13.26□□□□□ -0.29
HLA-DMB-258ENST00000418107 PIP4P1Q86T03 277 aa13.26□□□□□ -0.29
HLA-DMB-258ENST00000418107 PRPF39Q86UA1 669 aaKnown RBP13.26□□□□□ -0.29
HLA-DMB-258ENST00000418107 APCDD1Q8J025 514 aa13.26□□□□□ -0.29
HLA-DMB-258ENST00000418107 AGGF1Q8N302 714 aaeCLIP13.26□□□□□ -0.29
HLA-DMB-258ENST00000418107 PGBD5Q8N414 524 aa13.26□□□□□ -0.29
HLA-DMB-258ENST00000418107 DEFB119Q8N690 84 aa13.26□□□□□ -0.29
HLA-DMB-258ENST00000418107 KIAA1958Q8N8K9 716 aa13.26□□□□□ -0.29
HLA-DMB-258ENST00000418107 DCAF4L2Q8NA75 395 aa13.26□□□□□ -0.29
HLA-DMB-258ENST00000418107 PPHLN1Q8NEY8 458 aaKnown RBP13.26□□□□□ -0.29
HLA-DMB-258ENST00000418107 PGM2Q96G03 612 aa13.26□□□□□ -0.29
HLA-DMB-258ENST00000418107 MRGPRX2Q96LB1 330 aa13.26□□□□□ -0.29
HLA-DMB-258ENST00000418107 GTPBP2Q9BX10 602 aaKnown RBP13.26□□□□□ -0.29
HLA-DMB-258ENST00000418107 ABCB8Q9NUT2 735 aa13.26□□□□□ -0.29
HLA-DMB-258ENST00000418107 PSMC3IPQ9P2W1 217 aaPredicted RBP13.26□□□□□ -0.29
HLA-DMB-258ENST00000418107 SLC24A2Q9UI40 661 aa13.26□□□□□ -0.29
HLA-DMB-258ENST00000418107 VPS51Q9UID3 782 aa13.26□□□□□ -0.29
HLA-DMB-258ENST00000418107 PILRBQ9UKJ0 227 aa13.26□□□□□ -0.29
HLA-DMB-258ENST00000418107 RPS6KL1Q9Y6S9 549 aa13.26□□□□□ -0.29
HLA-DMB-258ENST00000418107 DSPP15924 2871 aaKnown RBP13.26□□□□□ -0.29
HLA-DMB-258ENST00000418107 PCNX2A6NKB5 2137 aa13.25□□□□□ -0.29
HLA-DMB-258ENST00000418107 TCRBV9S1A1TA0A576 114 aa13.25□□□□□ -0.29
HLA-DMB-258ENST00000418107 INHBAP08476 426 aa13.25□□□□□ -0.29
HLA-DMB-258ENST00000418107 TYRP14679 529 aa13.25□□□□□ -0.29
HLA-DMB-258ENST00000418107 CD70P32970 193 aa13.25□□□□□ -0.29
HLA-DMB-258ENST00000418107 ATXN3P54252 364 aaPredicted RBP13.25□□□□□ -0.29
HLA-DMB-258ENST00000418107 ARF5P84085 180 aa13.25□□□□□ -0.29
HLA-DMB-258ENST00000418107 SKOR1P84550 965 aa13.25□□□□□ -0.29
HLA-DMB-258ENST00000418107 SLC12A1Q13621 1099 aa13.25□□□□□ -0.29
HLA-DMB-258ENST00000418107 EFTUD2Q15029 972 aaKnown RBP eCLIP13.25□□□□□ -0.29
HLA-DMB-258ENST00000418107 SPANXN3Q5MJ09 141 aa13.25□□□□□ -0.29
HLA-DMB-258ENST00000418107 PEAR1Q5VY43 1037 aaPredicted RBP13.25□□□□□ -0.29
HLA-DMB-258ENST00000418107 TAOK1Q7L7X3 1001 aa13.25□□□□□ -0.29
HLA-DMB-258ENST00000418107 KLHDC8BQ8IXV7 354 aa13.25□□□□□ -0.29
HLA-DMB-258ENST00000418107 PHTF2Q8N3S3 785 aa13.25□□□□□ -0.29
HLA-DMB-258ENST00000418107 PAF1Q8N7H5 531 aa13.25□□□□□ -0.29
HLA-DMB-258ENST00000418107 PPM1NQ8N819 430 aa13.25□□□□□ -0.29
HLA-DMB-258ENST00000418107 ZNF669Q96BR6 464 aaPredicted RBP13.25□□□□□ -0.29
HLA-DMB-258ENST00000418107 EXOC2Q96KP1 924 aa13.25□□□□□ -0.29
HLA-DMB-258ENST00000418107 PSKH2Q96QS6 385 aa13.25□□□□□ -0.29
HLA-DMB-258ENST00000418107 MGME1Q9BQP7 344 aa13.25□□□□□ -0.29
HLA-DMB-258ENST00000418107 CLEC4EQ9ULY5 219 aa13.25□□□□□ -0.29
HLA-DMB-258ENST00000418107 LHX6Q9UPM6 363 aa13.25□□□□□ -0.29
HLA-DMB-258ENST00000418107 MSRB2Q9Y3D2 182 aa13.25□□□□□ -0.29
HLA-DMB-258ENST00000418107 FREM2Q5SZK8 3169 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms