RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 CENPLQ8N0S6 344 aaPredicted RBP16.82■□□□□ 0.28
SSBP3-205ENST00000417664 OR4K2Q8NGD2 314 aa16.82■□□□□ 0.28
SSBP3-205ENST00000417664 OR2AP1Q8NGE2 309 aa16.82■□□□□ 0.28
SSBP3-205ENST00000417664 PPP4R1Q8TF05 950 aa16.82■□□□□ 0.28
SSBP3-205ENST00000417664 PDCD6IPQ8WUM4 868 aaKnown RBP16.82■□□□□ 0.28
SSBP3-205ENST00000417664 MYO19Q96H55 970 aa16.82■□□□□ 0.28
SSBP3-205ENST00000417664 TUBGCP5Q96RT8 1024 aa16.82■□□□□ 0.28
SSBP3-205ENST00000417664 BBS2Q9BXC9 721 aa16.82■□□□□ 0.28
SSBP3-205ENST00000417664 ATP13A3Q9H7F0 1226 aa16.82■□□□□ 0.28
SSBP3-205ENST00000417664 POPDC3Q9HBV1 291 aa16.82■□□□□ 0.28
SSBP3-205ENST00000417664 SLC12A4Q9UP95 1085 aa16.82■□□□□ 0.28
SSBP3-205ENST00000417664 RUVBL2Q9Y230 463 aaKnown RBP16.82■□□□□ 0.28
SSBP3-205ENST00000417664 MRPS23Q9Y3D9 190 aaKnown RBP16.82■□□□□ 0.28
SSBP3-205ENST00000417664 PCDHB9Q9Y5E1 797 aa16.82■□□□□ 0.28
SSBP3-205ENST00000417664 NOTCH4Q99466 2003 aa16.82■□□□□ 0.28
SSBP3-205ENST00000417664 G3V2L1 256 aa16.81■□□□□ 0.28
SSBP3-205ENST00000417664 SMAD6O43541 496 aaKnown RBP16.81■□□□□ 0.28
SSBP3-205ENST00000417664 TRIM13O60858 407 aa16.81■□□□□ 0.28
SSBP3-205ENST00000417664 MYL2P10916 166 aa16.81■□□□□ 0.28
SSBP3-205ENST00000417664 PMLP29590 882 aa16.81■□□□□ 0.28
SSBP3-205ENST00000417664 SLC1A6P48664 564 aa16.81■□□□□ 0.28
SSBP3-205ENST00000417664 ACTN3Q08043 901 aaPredicted RBP16.81■□□□□ 0.28
SSBP3-205ENST00000417664 OVGP1Q12889 678 aa16.81■□□□□ 0.28
SSBP3-205ENST00000417664 C9orf50Q5SZB4 431 aa16.81■□□□□ 0.28
SSBP3-205ENST00000417664 ATXN7L2Q5T6C5 722 aaPredicted RBP16.81■□□□□ 0.28
SSBP3-205ENST00000417664 HECTD2Q5U5R9 776 aa16.81■□□□□ 0.28
SSBP3-205ENST00000417664 AGAP9Q5VTM2 703 aa16.81■□□□□ 0.28
SSBP3-205ENST00000417664 ZYG11AQ6WRX3 759 aa16.81■□□□□ 0.28
SSBP3-205ENST00000417664 ARID3BQ8IVW6 561 aaPredicted RBP16.81■□□□□ 0.28
SSBP3-205ENST00000417664 FITM2Q8N6M3 262 aa16.81■□□□□ 0.28
SSBP3-205ENST00000417664 CELF5Q8N6W0 485 aaKnown RBP16.81■□□□□ 0.28
SSBP3-205ENST00000417664 MRPL57Q9BQC6 102 aaKnown RBP16.81■□□□□ 0.28
SSBP3-205ENST00000417664 PIDD1Q9HB75 910 aa16.81■□□□□ 0.28
SSBP3-205ENST00000417664 MARCH4Q9P2E8 410 aaPredicted RBP16.81■□□□□ 0.28
SSBP3-205ENST00000417664 SLC25A13Q9UJS0 675 aa16.81■□□□□ 0.28
SSBP3-205ENST00000417664 ANKRD36A6QL64 1941 aa16.81■□□□□ 0.28
SSBP3-205ENST00000417664 DOCK6Q96HP0 2047 aa16.81■□□□□ 0.28
SSBP3-205ENST00000417664 GRXCR1A8MXD5 290 aa16.81■□□□□ 0.28
SSBP3-205ENST00000417664 TMEM114B3SHH9 223 aa16.81■□□□□ 0.28
SSBP3-205ENST00000417664 K7ERQ8 282 aa16.81■□□□□ 0.28
SSBP3-205ENST00000417664 TRAFD1O14545 582 aaPredicted RBP16.81■□□□□ 0.28
SSBP3-205ENST00000417664 AURKAO14965 403 aa16.81■□□□□ 0.28
SSBP3-205ENST00000417664 PER2O15055 1255 aa16.81■□□□□ 0.28
SSBP3-205ENST00000417664 STX7O15400 261 aaKnown RBP16.81■□□□□ 0.28
SSBP3-205ENST00000417664 ATP5HO75947 161 aa16.81■□□□□ 0.28
SSBP3-205ENST00000417664 PRAMEF12O95522 483 aa16.81■□□□□ 0.28
SSBP3-205ENST00000417664 SERPINA4P29622 427 aa16.81■□□□□ 0.28
SSBP3-205ENST00000417664 HMGCLP35914 325 aa16.81■□□□□ 0.28
SSBP3-205ENST00000417664 SKIV2L2P42285 1042 aaKnown RBP16.81■□□□□ 0.28
SSBP3-205ENST00000417664 ZNF789Q5FWF6 425 aa16.81■□□□□ 0.28
SSBP3-205ENST00000417664 AARS2Q5JTZ9 985 aaKnown RBP16.81■□□□□ 0.28
SSBP3-205ENST00000417664 LRRC8EQ6NSJ5 796 aa16.81■□□□□ 0.28
SSBP3-205ENST00000417664 KLC3Q6P597 504 aa16.81■□□□□ 0.28
SSBP3-205ENST00000417664 WDR75Q8IWA0 830 aaKnown RBP16.81■□□□□ 0.28
SSBP3-205ENST00000417664 PLPP6Q8IY26 295 aa16.81■□□□□ 0.28
SSBP3-205ENST00000417664 ADGRG2Q8IZP9 1017 aa16.81■□□□□ 0.28
SSBP3-205ENST00000417664 TNS4Q8IZW8 715 aa16.81■□□□□ 0.28
SSBP3-205ENST00000417664 FSTL5Q8N475 847 aaPredicted RBP16.81■□□□□ 0.28
SSBP3-205ENST00000417664 TTC30BQ8N4P2 665 aa16.81■□□□□ 0.28
SSBP3-205ENST00000417664 PCDH20Q8N6Y1 951 aaKnown RBP16.81■□□□□ 0.28
SSBP3-205ENST00000417664 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.81■□□□□ 0.283e-6■■■□□ 15.6
SSBP3-205ENST00000417664 RIN3Q8TB24 985 aa16.81■□□□□ 0.28
SSBP3-205ENST00000417664 KCTD4Q8WVF5 259 aa16.81■□□□□ 0.28
SSBP3-205ENST00000417664 PIH1D2Q8WWB5 315 aa16.81■□□□□ 0.28
SSBP3-205ENST00000417664 SMG7Q92540 1137 aaKnown RBP16.81■□□□□ 0.28
SSBP3-205ENST00000417664 GPR78Q96P69 363 aa16.81■□□□□ 0.28
SSBP3-205ENST00000417664 TM6SF2Q9BZW4 377 aa16.81■□□□□ 0.28
SSBP3-205ENST00000417664 MRPL46Q9H2W6 279 aaKnown RBP16.81■□□□□ 0.28
SSBP3-205ENST00000417664 STN1Q9H668 368 aaKnown RBP16.81■□□□□ 0.28
SSBP3-205ENST00000417664 SUDS3Q9H7L9 328 aaPredicted RBP16.81■□□□□ 0.28
SSBP3-205ENST00000417664 OXSMQ9NWU1 459 aa16.81■□□□□ 0.28
SSBP3-205ENST00000417664 DCTN4Q9UJW0 460 aa16.81■□□□□ 0.28
SSBP3-205ENST00000417664 PKP3Q9Y446 797 aa16.81■□□□□ 0.28
SSBP3-205ENST00000417664 A0A0G2JND7 137 aa16.8■□□□□ 0.28
SSBP3-205ENST00000417664 A0A1W2PQ67 120 aa16.8■□□□□ 0.28
SSBP3-205ENST00000417664 OR51F1A6NGY5 319 aa16.8■□□□□ 0.28
SSBP3-205ENST00000417664 TARM1B6A8C7 271 aa16.8■□□□□ 0.28
SSBP3-205ENST00000417664 NEDD8-MDP1E9PL57 170 aa16.8■□□□□ 0.28
SSBP3-205ENST00000417664 UBOX5O94941 541 aa16.8■□□□□ 0.28
SSBP3-205ENST00000417664 SNUPNO95149 360 aaKnown RBP16.8■□□□□ 0.28
SSBP3-205ENST00000417664 PABPC1P11940 636 aaKnown RBP16.8■□□□□ 0.28
SSBP3-205ENST00000417664 SRCP12931 536 aa16.8■□□□□ 0.28
SSBP3-205ENST00000417664 TYRP14679 529 aa16.8■□□□□ 0.28
SSBP3-205ENST00000417664 SCTRP47872 440 aa16.8■□□□□ 0.28
SSBP3-205ENST00000417664 ABCE1P61221 599 aaKnown RBP16.8■□□□□ 0.28
SSBP3-205ENST00000417664 NTHL1P78549 312 aa16.8■□□□□ 0.28
SSBP3-205ENST00000417664 BNIP1Q12981 228 aa16.8■□□□□ 0.28
SSBP3-205ENST00000417664 RBM20Q5T481 1227 aaKnown RBP16.8■□□□□ 0.28
SSBP3-205ENST00000417664 FAM109BQ6ICB4 259 aaPredicted RBP16.8■□□□□ 0.28
SSBP3-205ENST00000417664 KIAA0907Q7Z7F0 614 aaPredicted RBP16.8■□□□□ 0.28
SSBP3-205ENST00000417664 TMEM151AQ8N4L1 468 aa16.8■□□□□ 0.28
SSBP3-205ENST00000417664 RFWD2Q8NHY2 731 aa16.8■□□□□ 0.28
SSBP3-205ENST00000417664 PIWIL2Q8TC59 973 aaKnown RBP16.8■□□□□ 0.28
SSBP3-205ENST00000417664 THOC1Q96FV9 657 aaKnown RBP16.8■□□□□ 0.28
SSBP3-205ENST00000417664 SCYL1Q96KG9 808 aa16.8■□□□□ 0.28
SSBP3-205ENST00000417664 UBXN10Q96LJ8 280 aa16.8■□□□□ 0.28
SSBP3-205ENST00000417664 CDCA3Q99618 268 aaPredicted RBP16.8■□□□□ 0.28
SSBP3-205ENST00000417664 CPEB1Q9BZB8 566 aaKnown RBP16.8■□□□□ 0.28
SSBP3-205ENST00000417664 TLE6Q9H808 572 aa16.8■□□□□ 0.28
SSBP3-205ENST00000417664 KCNK13Q9HB14 408 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms