RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 TNFRSF10CO14798 259 aa14.87□□□□□ -0.03
RPS28-201ENST00000417088 HOXC4P09017 264 aaPredicted RBP14.87□□□□□ -0.03
RPS28-201ENST00000417088 ELFN1P0C7U0 828 aa14.87□□□□□ -0.03
RPS28-201ENST00000417088 ATP1A3P13637 1013 aa14.87□□□□□ -0.03
RPS28-201ENST00000417088 HGFP14210 728 aa14.87□□□□□ -0.03
RPS28-201ENST00000417088 GLB1P16278 677 aa14.87□□□□□ -0.03
RPS28-201ENST00000417088 KELP23276 732 aa14.87□□□□□ -0.03
RPS28-201ENST00000417088 MIPP30301 263 aa14.87□□□□□ -0.03
RPS28-201ENST00000417088 SCNN1BP51168 640 aa14.87□□□□□ -0.03
RPS28-201ENST00000417088 POLR2LP62875 67 aaKnown RBP14.87□□□□□ -0.03
RPS28-201ENST00000417088 IL10RBQ08334 325 aa14.87□□□□□ -0.03
RPS28-201ENST00000417088 PPP6R3Q5H9R7 873 aaPredicted RBP14.87□□□□□ -0.03
RPS28-201ENST00000417088 PPP1R2P3Q6NXS1 205 aa14.87□□□□□ -0.03
RPS28-201ENST00000417088 CCNJLQ8IV13 435 aa14.87□□□□□ -0.03
RPS28-201ENST00000417088 TP53INP2Q8IXH6 220 aa14.87□□□□□ -0.03
RPS28-201ENST00000417088 PAF1Q8N7H5 531 aa14.87□□□□□ -0.03
RPS28-201ENST00000417088 FAM46DQ8NEK8 389 aa14.87□□□□□ -0.03
RPS28-201ENST00000417088 PSKH2Q96QS6 385 aa14.87□□□□□ -0.03
RPS28-201ENST00000417088 CCNL2Q96S94 520 aaPredicted RBP14.87□□□□□ -0.03
RPS28-201ENST00000417088 LGR4Q9BXB1 951 aa14.87□□□□□ -0.03
RPS28-201ENST00000417088 TMEM168Q9H0V1 697 aa14.87□□□□□ -0.03
RPS28-201ENST00000417088 ATXN7L1Q9ULK2 861 aaPredicted RBP14.87□□□□□ -0.03
RPS28-201ENST00000417088 MYO6Q9UM54 1294 aa14.87□□□□□ -0.03
RPS28-201ENST00000417088 ANKRD36A6QL64 1941 aa14.86□□□□□ -0.03
RPS28-201ENST00000417088 J3QKU1 62 aa14.86□□□□□ -0.03
RPS28-201ENST00000417088 TEX33O43247 280 aa14.86□□□□□ -0.03
RPS28-201ENST00000417088 PRPSAP2O60256 369 aa14.86□□□□□ -0.03
RPS28-201ENST00000417088 RNF8O76064 485 aa14.86□□□□□ -0.03
RPS28-201ENST00000417088 PNLIPP16233 465 aa14.86□□□□□ -0.03
RPS28-201ENST00000417088 HCAR3P49019 387 aa14.86□□□□□ -0.03
RPS28-201ENST00000417088 AP1S1P61966 158 aa14.86□□□□□ -0.03
RPS28-201ENST00000417088 ZFP36L1Q07352 338 aaKnown RBP14.86□□□□□ -0.03
RPS28-201ENST00000417088 HLTFQ14527 1009 aaKnown RBP eCLIP14.86□□□□□ -0.03
RPS28-201ENST00000417088 LBRQ14739 615 aaKnown RBP14.86□□□□□ -0.03
RPS28-201ENST00000417088 TGIF1Q15583 401 aa14.86□□□□□ -0.03
RPS28-201ENST00000417088 C14orf28Q4W4Y0 310 aa14.86□□□□□ -0.03
RPS28-201ENST00000417088 CERCAMQ5T4B2 595 aa14.86□□□□□ -0.03
RPS28-201ENST00000417088 PNCKQ6P2M8 343 aa14.86□□□□□ -0.03
RPS28-201ENST00000417088 SPRED1Q7Z699 444 aa14.86□□□□□ -0.03
RPS28-201ENST00000417088 JAMLQ86YT9 394 aa14.86□□□□□ -0.03
RPS28-201ENST00000417088 PSTKQ8IV42 348 aaKnown RBP14.86□□□□□ -0.03
RPS28-201ENST00000417088 CCL4L1Q8NHW4 92 aa14.86□□□□□ -0.03
RPS28-201ENST00000417088 COQ10AQ96MF6 247 aa14.86□□□□□ -0.03
RPS28-201ENST00000417088 WDR26Q9H7D7 661 aa14.86□□□□□ -0.03
RPS28-201ENST00000417088 CYP4F12Q9HCS2 524 aa14.86□□□□□ -0.03
RPS28-201ENST00000417088 CWC15Q9P013 229 aaKnown RBP14.86□□□□□ -0.03
RPS28-201ENST00000417088 LRIT1Q9P2V4 623 aa14.86□□□□□ -0.03
RPS28-201ENST00000417088 B4GALT6Q9UBX8 382 aa14.86□□□□□ -0.03
RPS28-201ENST00000417088 PISDQ9UG56 409 aa14.86□□□□□ -0.03
RPS28-201ENST00000417088 SEPT3Q9UH03 358 aa14.86□□□□□ -0.03
RPS28-201ENST00000417088 ACSL6Q9UKU0 697 aa14.86□□□□□ -0.03
RPS28-201ENST00000417088 LOXL2Q9Y4K0 774 aa14.86□□□□□ -0.03
RPS28-201ENST00000417088 RNF215Q9Y6U7 377 aa14.86□□□□□ -0.03
RPS28-201ENST00000417088 TENM4Q6N022 2769 aa14.85□□□□□ -0.03
RPS28-201ENST00000417088 TTC24A2A3L6 582 aaPredicted RBP14.85□□□□□ -0.03
RPS28-201ENST00000417088 LRRC53A6NM62 1247 aa14.85□□□□□ -0.03
RPS28-201ENST00000417088 B4DGG1 531 aa14.85□□□□□ -0.03
RPS28-201ENST00000417088 B8ZZF3 427 aa14.85□□□□□ -0.03
RPS28-201ENST00000417088 LRCH4O75427 683 aa14.85□□□□□ -0.03
RPS28-201ENST00000417088 RENBPP51606 427 aa14.85□□□□□ -0.03
RPS28-201ENST00000417088 SLC10A7Q0GE19 358 aa14.85□□□□□ -0.03
RPS28-201ENST00000417088 DPYSQ14117 519 aa14.85□□□□□ -0.03
RPS28-201ENST00000417088 ACOX1Q15067 660 aa14.85□□□□□ -0.03
RPS28-201ENST00000417088 TMCO4Q5TGY1 634 aa14.85□□□□□ -0.03
RPS28-201ENST00000417088 SPECC1LQ69YQ0 1117 aa14.85□□□□□ -0.03
RPS28-201ENST00000417088 ZNF571Q7Z3V5 609 aaPredicted RBP14.85□□□□□ -0.03
RPS28-201ENST00000417088 TMPRSS9Q7Z410 1059 aa14.85□□□□□ -0.03
RPS28-201ENST00000417088 FNIP1Q8TF40 1166 aa14.85□□□□□ -0.03
RPS28-201ENST00000417088 SPOCK2Q92563 424 aa14.85□□□□□ -0.03
RPS28-201ENST00000417088 MED8Q96G25 268 aa14.85□□□□□ -0.03
RPS28-201ENST00000417088 DPEP2Q9H4A9 486 aa14.85□□□□□ -0.03
RPS28-201ENST00000417088 WDR70Q9NW82 654 aa14.85□□□□□ -0.03
RPS28-201ENST00000417088 MOSPD1Q9UJG1 213 aa14.85□□□□□ -0.03
RPS28-201ENST00000417088 ARHGEF17Q96PE2 2063 aaPredicted RBP14.85□□□□□ -0.03
RPS28-201ENST00000417088 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.84□□□□□ -0.03
RPS28-201ENST00000417088 PRSS38A1L453 326 aa14.84□□□□□ -0.03
RPS28-201ENST00000417088 AGRPO00253 132 aa14.84□□□□□ -0.03
RPS28-201ENST00000417088 NVLO15381 856 aaKnown RBP14.84□□□□□ -0.03
RPS28-201ENST00000417088 HTRA2O43464 458 aaPredicted RBP14.84□□□□□ -0.03
RPS28-201ENST00000417088 NUDT21O43809 227 aaKnown RBP14.84□□□□□ -0.03
RPS28-201ENST00000417088 PEX11BO96011 259 aa14.84□□□□□ -0.03
RPS28-201ENST00000417088 FTLP02792 175 aaPredicted RBP14.84□□□□□ -0.03
RPS28-201ENST00000417088 JMJD7P0C870 316 aa14.84□□□□□ -0.03
RPS28-201ENST00000417088 ITIH1P19827 911 aa14.84□□□□□ -0.03
RPS28-201ENST00000417088 ZNF135P52742 658 aaPredicted RBP14.84□□□□□ -0.03
RPS28-201ENST00000417088 B4GALNT1Q00973 533 aa14.84□□□□□ -0.03
RPS28-201ENST00000417088 ARHGEF7Q14155 803 aa14.84□□□□□ -0.03
RPS28-201ENST00000417088 CNGA3Q16281 694 aa14.84□□□□□ -0.03
RPS28-201ENST00000417088 E4F1Q66K89 784 aaPredicted RBP14.84□□□□□ -0.03
RPS28-201ENST00000417088 SLITRK4Q8IW52 837 aa14.84□□□□□ -0.03
RPS28-201ENST00000417088 CBARPQ8N350 705 aaPredicted RBP14.84□□□□□ -0.03
RPS28-201ENST00000417088 LZTR1Q8N653 840 aa14.84□□□□□ -0.03
RPS28-201ENST00000417088 AOPEPQ8N6M6 819 aa14.84□□□□□ -0.03
RPS28-201ENST00000417088 ZNF599Q96NL3 588 aa14.84□□□□□ -0.03
RPS28-201ENST00000417088 HAUS4Q9H6D7 363 aa14.84□□□□□ -0.03
RPS28-201ENST00000417088 RTN4Q9NQC3 1192 aaKnown RBP14.84□□□□□ -0.03
RPS28-201ENST00000417088 SPATS2LQ9NUQ6 558 aaKnown RBP14.84□□□□□ -0.03
RPS28-201ENST00000417088 CNOT8Q9UFF9 292 aaKnown RBP14.84□□□□□ -0.03
RPS28-201ENST00000417088 PCDHGC4Q9Y5F7 938 aa14.84□□□□□ -0.03
RPS28-201ENST00000417088 PDE2AO00408 941 aaPredicted RBP14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms