RNA–Protein interactions for RNA: ENST00000415537.1

HLA-C-204, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-204ENST00000415537 ZNF670Q9BS34 389 aa25.06■■□□□ 1.6
HLA-C-204ENST00000415537 PACSIN1Q9BY11 444 aa25.06■■□□□ 1.6
HLA-C-204ENST00000415537 FAM208BQ5VWN6 2430 aa25.06■■□□□ 1.6
HLA-C-204ENST00000415537 MFSD11O43934 449 aa25.05■■□□□ 1.6
HLA-C-204ENST00000415537 KELP23276 732 aa25.05■■□□□ 1.6
HLA-C-204ENST00000415537 VIPR1P32241 457 aa25.05■■□□□ 1.6
HLA-C-204ENST00000415537 GARSP41250 739 aaKnown RBP25.05■■□□□ 1.6
HLA-C-204ENST00000415537 TCEA2Q15560 299 aa25.05■■□□□ 1.6
HLA-C-204ENST00000415537 ARMC12Q5T9G4 340 aa25.05■■□□□ 1.6
HLA-C-204ENST00000415537 DENND2CQ68D51 928 aa25.05■■□□□ 1.6
HLA-C-204ENST00000415537 NCBP2-AS2Q69YL0 99 aa25.05■■□□□ 1.6
HLA-C-204ENST00000415537 SLC35F3Q8IY50 421 aa25.05■■□□□ 1.6
HLA-C-204ENST00000415537 OR56A4Q8NGH8 313 aa25.05■■□□□ 1.6
HLA-C-204ENST00000415537 NAT6Q93015 286 aa25.05■■□□□ 1.6
HLA-C-204ENST00000415537 HAUS2Q9NVX0 235 aa25.05■■□□□ 1.6
HLA-C-204ENST00000415537 KCTD5Q9NXV2 234 aa25.05■■□□□ 1.6
HLA-C-204ENST00000415537 GULP1Q9UBP9 304 aa25.05■■□□□ 1.6
HLA-C-204ENST00000415537 PADI4Q9UM07 663 aa25.05■■□□□ 1.6
HLA-C-204ENST00000415537 PCDHB1Q9Y5F3 818 aa25.05■■□□□ 1.6
HLA-C-204ENST00000415537 ASXL3Q9C0F0 2248 aa25.05■■□□□ 1.6
HLA-C-204ENST00000415537 A0A087WV48 116 aa25.04■■□□□ 1.6
HLA-C-204ENST00000415537 BRINP1O60477 761 aa25.04■■□□□ 1.6
HLA-C-204ENST00000415537 CSO75390 466 aaKnown RBP25.04■■□□□ 1.6
HLA-C-204ENST00000415537 CELA2BP08218 269 aaPredicted RBP25.04■■□□□ 1.6
HLA-C-204ENST00000415537 TMEM253P0C7T8 217 aa25.04■■□□□ 1.6
HLA-C-204ENST00000415537 TGM2P21980 687 aa25.04■■□□□ 1.6
HLA-C-204ENST00000415537 KIAA1024LP59773 190 aa25.04■■□□□ 1.6
HLA-C-204ENST00000415537 GALNT2Q10471 571 aa25.04■■□□□ 1.6
HLA-C-204ENST00000415537 TRAF2Q12933 501 aa25.04■■□□□ 1.6
HLA-C-204ENST00000415537 PAFAH1B3Q15102 231 aaKnown RBP25.04■■□□□ 1.6
HLA-C-204ENST00000415537 IFI16Q16666 785 aaKnown RBP25.04■■□□□ 1.6
HLA-C-204ENST00000415537 ASTE1Q2TB18 679 aaPredicted RBP25.04■■□□□ 1.6
HLA-C-204ENST00000415537 PNCKQ6P2M8 343 aa25.04■■□□□ 1.6
HLA-C-204ENST00000415537 LRRC69Q6ZNQ3 347 aa25.04■■□□□ 1.6
HLA-C-204ENST00000415537 NDUFAF2Q8N183 169 aa25.04■■□□□ 1.6
HLA-C-204ENST00000415537 TEX26Q8N6G2 289 aa25.04■■□□□ 1.6
HLA-C-204ENST00000415537 PCDH19Q8TAB3 1148 aa25.04■■□□□ 1.6
HLA-C-204ENST00000415537 FUBP1Q96AE4 644 aaKnown RBP25.04■■□□□ 1.6
HLA-C-204ENST00000415537 NUS1Q96E22 293 aa25.04■■□□□ 1.6
HLA-C-204ENST00000415537 ABHD10Q9NUJ1 306 aa25.04■■□□□ 1.6
HLA-C-204ENST00000415537 DSPP15924 2871 aaKnown RBP25.04■■□□□ 1.6
HLA-C-204ENST00000415537 LAMA5O15230 3695 aa25.03■■□□□ 1.6
HLA-C-204ENST00000415537 RP1P56715 2156 aa25.03■■□□□ 1.6
HLA-C-204ENST00000415537 PDE2AO00408 941 aaPredicted RBP25.03■■□□□ 1.6
HLA-C-204ENST00000415537 RRP8O43159 456 aaKnown RBP25.03■■□□□ 1.6
HLA-C-204ENST00000415537 USP12O75317 370 aa25.03■■□□□ 1.6
HLA-C-204ENST00000415537 KRT10P13645 584 aa25.03■■□□□ 1.6
HLA-C-204ENST00000415537 ACTN2P35609 894 aa25.03■■□□□ 1.6
HLA-C-204ENST00000415537 TRIM23P36406 574 aa25.03■■□□□ 1.6
HLA-C-204ENST00000415537 TAS2R40P59535 323 aa25.03■■□□□ 1.6
HLA-C-204ENST00000415537 ARHGEF7Q14155 803 aa25.03■■□□□ 1.6
HLA-C-204ENST00000415537 MESDQ14696 234 aa25.03■■□□□ 1.6
HLA-C-204ENST00000415537 CRTC1Q6UUV9 634 aa25.03■■□□□ 1.6
HLA-C-204ENST00000415537 USP45Q70EL2 814 aa25.03■■□□□ 1.6
HLA-C-204ENST00000415537 CPNE8Q86YQ8 564 aa25.03■■□□□ 1.6
HLA-C-204ENST00000415537 VSTM4Q8IW00 320 aa25.03■■□□□ 1.6
HLA-C-204ENST00000415537 ARL10Q8N8L6 244 aa25.03■■□□□ 1.6
HLA-C-204ENST00000415537 PDXPQ96GD0 296 aa25.03■■□□□ 1.6
HLA-C-204ENST00000415537 CCDC42Q96M95 316 aa25.03■■□□□ 1.6
HLA-C-204ENST00000415537 COQ10AQ96MF6 247 aa25.03■■□□□ 1.6
HLA-C-204ENST00000415537 SEMA3CQ99985 751 aa25.03■■□□□ 1.6
HLA-C-204ENST00000415537 POLR1EQ9GZS1 481 aaKnown RBP25.03■■□□□ 1.6
HLA-C-204ENST00000415537 WDR26Q9H7D7 661 aa25.03■■□□□ 1.6
HLA-C-204ENST00000415537 SIRPGQ9P1W8 387 aa25.03■■□□□ 1.6
HLA-C-204ENST00000415537 GPR34Q9UPC5 381 aa25.03■■□□□ 1.6
HLA-C-204ENST00000415537 DGKBQ9Y6T7 804 aa25.03■■□□□ 1.6
HLA-C-204ENST00000415537 TMEM202A6NGA9 273 aa25.02■■□□□ 1.6
HLA-C-204ENST00000415537 MATN3O15232 486 aa25.02■■□□□ 1.6
HLA-C-204ENST00000415537 HEXIM1O94992 359 aaKnown RBP25.02■■□□□ 1.6
HLA-C-204ENST00000415537 PGLSO95336 258 aa25.02■■□□□ 1.6
HLA-C-204ENST00000415537 HOXC4P09017 264 aaPredicted RBP25.02■■□□□ 1.6
HLA-C-204ENST00000415537 GM2AP17900 193 aa25.02■■□□□ 1.6
HLA-C-204ENST00000415537 CCNCP24863 283 aa25.02■■□□□ 1.6
HLA-C-204ENST00000415537 MAN1A1P33908 653 aa25.02■■□□□ 1.6
HLA-C-204ENST00000415537 CNGA3Q16281 694 aa25.02■■□□□ 1.6
HLA-C-204ENST00000415537 PERM1Q5SV97 790 aa25.02■■□□□ 1.6
HLA-C-204ENST00000415537 RNF214Q8ND24 703 aa25.02■■□□□ 1.6
HLA-C-204ENST00000415537 WDR48Q8TAF3 677 aa25.02■■□□□ 1.6
HLA-C-204ENST00000415537 FGF11Q92914 225 aa25.02■■□□□ 1.6
HLA-C-204ENST00000415537 SCRN2Q96FV2 425 aa25.02■■□□□ 1.6
HLA-C-204ENST00000415537 MOSPD1Q9UJG1 213 aa25.02■■□□□ 1.6
HLA-C-204ENST00000415537 TTLL3Q9Y4R7 772 aa25.02■■□□□ 1.6
HLA-C-204ENST00000415537 RAI2Q9Y5P3 530 aa25.02■■□□□ 1.6
HLA-C-204ENST00000415537 CELSR3Q9NYQ7 3312 aa25.02■■□□□ 1.6
HLA-C-204ENST00000415537 TNFRSF10CO14798 259 aa25.01■■□□□ 1.59
HLA-C-204ENST00000415537 TLX3O43711 291 aaPredicted RBP25.01■■□□□ 1.59
HLA-C-204ENST00000415537 MAP3K6O95382 1288 aa25.01■■□□□ 1.59
HLA-C-204ENST00000415537 MX2P20592 715 aa25.01■■□□□ 1.59
HLA-C-204ENST00000415537 CES1P23141 567 aa25.01■■□□□ 1.59
HLA-C-204ENST00000415537 EIF2S3P41091 472 aaKnown RBP25.01■■□□□ 1.59
HLA-C-204ENST00000415537 ABCG1P45844 678 aa25.01■■□□□ 1.59
HLA-C-204ENST00000415537 RBM44Q6ZP01 1051 aaKnown RBP25.01■■□□□ 1.59
HLA-C-204ENST00000415537 LSMEM2Q8N112 164 aa25.01■■□□□ 1.59
HLA-C-204ENST00000415537 SLC35G2Q8TBE7 412 aa25.01■■□□□ 1.59
HLA-C-204ENST00000415537 RBM15Q96T37 977 aaKnown RBP eCLIP25.01■■□□□ 1.59
HLA-C-204ENST00000415537 CHP1Q99653 195 aa25.01■■□□□ 1.59
HLA-C-204ENST00000415537 CCDC3Q9BQI4 270 aa25.01■■□□□ 1.59
HLA-C-204ENST00000415537 NHEJ1Q9H9Q4 299 aaPredicted RBP25.01■■□□□ 1.59
HLA-C-204ENST00000415537 RBM22Q9NW64 420 aaKnown RBP eCLIP25.01■■□□□ 1.59
HLA-C-204ENST00000415537 GOLGA6CA6NDK9 693 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms