RNA–Protein interactions for RNA: ENST00000415472.6

RBM28-202, Transcript of RNA binding motif protein 28, humanhuman

TSL 2 BASIC

Gene RBM28, Length 2,251 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-202ENST00000415472 REP15Q6BDI9 236 aa11.7□□□□□ -0.54
RBM28-202ENST00000415472 SATL1Q86VE3 508 aa11.7□□□□□ -0.54
RBM28-202ENST00000415472 RYBPQ8N488 228 aaPredicted RBP11.7□□□□□ -0.54
RBM28-202ENST00000415472 TEX26Q8N6G2 289 aa11.7□□□□□ -0.54
RBM28-202ENST00000415472 OR13C4Q8NGS5 318 aa11.7□□□□□ -0.54
RBM28-202ENST00000415472 FAM110BQ8TC76 370 aa11.7□□□□□ -0.54
RBM28-202ENST00000415472 TADA1Q96BN2 335 aa11.7□□□□□ -0.54
RBM28-202ENST00000415472 UROC1Q96N76 676 aa11.7□□□□□ -0.54
RBM28-202ENST00000415472 RANBP9Q96S59 729 aa11.7□□□□□ -0.54
RBM28-202ENST00000415472 SEMA3CQ99985 751 aa11.7□□□□□ -0.54
RBM28-202ENST00000415472 HCSTQ9UBK5 93 aa11.7□□□□□ -0.54
RBM28-202ENST00000415472 TRAF6Q9Y4K3 522 aa11.7□□□□□ -0.54
RBM28-202ENST00000415472 IGLV3-10A0A075B6K4 115 aa11.7□□□□□ -0.54
RBM28-202ENST00000415472 PRORSD1PA6NEY8 169 aa11.7□□□□□ -0.54
RBM28-202ENST00000415472 MANSC4A6NHS7 340 aaPredicted RBP11.7□□□□□ -0.54
RBM28-202ENST00000415472 H3BMM5 538 aa11.7□□□□□ -0.54
RBM28-202ENST00000415472 PSMD12O00232 456 aaPredicted RBP11.7□□□□□ -0.54
RBM28-202ENST00000415472 SLC7A4O43246 635 aa11.7□□□□□ -0.54
RBM28-202ENST00000415472 SUPT7LO94864 414 aa11.7□□□□□ -0.54
RBM28-202ENST00000415472 ALDOCP09972 364 aaKnown RBP11.7□□□□□ -0.54
RBM28-202ENST00000415472 FLT3LGP49771 235 aa11.7□□□□□ -0.54
RBM28-202ENST00000415472 CHN2P52757 468 aa11.7□□□□□ -0.54
RBM28-202ENST00000415472 FOXA1P55317 472 aa11.7□□□□□ -0.54
RBM28-202ENST00000415472 NME5P56597 212 aa11.7□□□□□ -0.54
RBM28-202ENST00000415472 YBX1P67809 324 aaKnown RBP11.7□□□□□ -0.54
RBM28-202ENST00000415472 SH3BP2P78314 561 aa11.7□□□□□ -0.54
RBM28-202ENST00000415472 PRAMEP78395 509 aa11.7□□□□□ -0.54
RBM28-202ENST00000415472 DSC1Q08554 894 aa11.7□□□□□ -0.54
RBM28-202ENST00000415472 ACAP2Q15057 778 aa11.7□□□□□ -0.54
RBM28-202ENST00000415472 OR4D1Q15615 310 aa11.7□□□□□ -0.54
RBM28-202ENST00000415472 NADSYN1Q6IA69 706 aa11.7□□□□□ -0.54
RBM28-202ENST00000415472 LRRC49Q8IUZ0 686 aa11.7□□□□□ -0.54
RBM28-202ENST00000415472 COLGALT2Q8IYK4 626 aa11.7□□□□□ -0.54
RBM28-202ENST00000415472 CFAP52Q8N1V2 620 aa11.7□□□□□ -0.54
RBM28-202ENST00000415472 GALNT15Q8N3T1 639 aa11.7□□□□□ -0.54
RBM28-202ENST00000415472 TMEM102Q8N9M5 508 aaPredicted RBP11.7□□□□□ -0.54
RBM28-202ENST00000415472 BLOC1S5Q8TDH9 187 aa11.7□□□□□ -0.54
RBM28-202ENST00000415472 LRCH3Q96II8 777 aa11.7□□□□□ -0.54
RBM28-202ENST00000415472 LRGUKQ96M69 825 aa11.7□□□□□ -0.54
RBM28-202ENST00000415472 NSUN5Q96P11 429 aaKnown RBP11.7□□□□□ -0.54
RBM28-202ENST00000415472 BTBD9Q96Q07 612 aa11.7□□□□□ -0.54
RBM28-202ENST00000415472 SPATA16Q9BXB7 569 aa11.7□□□□□ -0.54
RBM28-202ENST00000415472 MRPL1Q9BYD6 325 aaKnown RBP11.7□□□□□ -0.54
RBM28-202ENST00000415472 MFSD1Q9H3U5 465 aa11.7□□□□□ -0.54
RBM28-202ENST00000415472 RGS18Q9NS28 235 aa11.7□□□□□ -0.54
RBM28-202ENST00000415472 A0A0D9SEW6 157 aa11.69□□□□□ -0.54
RBM28-202ENST00000415472 A0A1B0GTW7 788 aa11.69□□□□□ -0.54
RBM28-202ENST00000415472 LOC285095A0A1B0GVY8 99 aa11.69□□□□□ -0.54
RBM28-202ENST00000415472 CCDC162PA2VCL2 907 aa11.69□□□□□ -0.54
RBM28-202ENST00000415472 SEPT4O43236 478 aa11.69□□□□□ -0.54
RBM28-202ENST00000415472 CSPG5O95196 566 aa11.69□□□□□ -0.54
RBM28-202ENST00000415472 PAPSS2O95340 614 aaPredicted RBP11.69□□□□□ -0.54
RBM28-202ENST00000415472 GOT2P00505 430 aaKnown RBP11.69□□□□□ -0.54
RBM28-202ENST00000415472 IMPDH1P20839 514 aa11.69□□□□□ -0.54
RBM28-202ENST00000415472 SATB1Q01826 763 aa11.69□□□□□ -0.54
RBM28-202ENST00000415472 UGT3A2Q3SY77 523 aa11.69□□□□□ -0.54
RBM28-202ENST00000415472 VARS2Q5ST30 1063 aaKnown RBP11.69□□□□□ -0.54
RBM28-202ENST00000415472 ZNF678Q5SXM1 525 aa11.69□□□□□ -0.54
RBM28-202ENST00000415472 CCSAPQ6IQ19 270 aaPredicted RBP11.69□□□□□ -0.54
RBM28-202ENST00000415472 RSPO2Q6UXX9 243 aaPredicted RBP11.69□□□□□ -0.54
RBM28-202ENST00000415472 FUNDC1Q8IVP5 155 aa11.69□□□□□ -0.54
RBM28-202ENST00000415472 ST13P4Q8IZP2 240 aaPredicted RBP11.69□□□□□ -0.54
RBM28-202ENST00000415472 CALML6Q8TD86 181 aa11.69□□□□□ -0.54
RBM28-202ENST00000415472 PPP1R2P1Q96PQ5 205 aa11.69□□□□□ -0.54
RBM28-202ENST00000415472 KCNA7Q96RP8 456 aa11.69□□□□□ -0.54
RBM28-202ENST00000415472 FAM192AQ9GZU8 254 aa11.69□□□□□ -0.54
RBM28-202ENST00000415472 SEMA6AQ9H2E6 1030 aa11.69□□□□□ -0.54
RBM28-202ENST00000415472 IKZF3Q9UKT9 509 aa11.69□□□□□ -0.54
RBM28-202ENST00000415472 UBXN8O00124 270 aa11.69□□□□□ -0.54
RBM28-202ENST00000415472 TRIM38O00635 465 aa11.69□□□□□ -0.54
RBM28-202ENST00000415472 TRIM24O15164 1050 aa11.69□□□□□ -0.54
RBM28-202ENST00000415472 VNN2O95498 520 aa11.69□□□□□ -0.54
RBM28-202ENST00000415472 RBP1P09455 135 aa11.69□□□□□ -0.54
RBM28-202ENST00000415472 GSTT1P30711 240 aa11.69□□□□□ -0.54
RBM28-202ENST00000415472 KCNQ1P51787 676 aa11.69□□□□□ -0.54
RBM28-202ENST00000415472 KPNA2P52292 529 aaKnown RBP11.69□□□□□ -0.54
RBM28-202ENST00000415472 TAF10Q12962 218 aa11.69□□□□□ -0.54
RBM28-202ENST00000415472 POLD3Q15054 466 aaPredicted RBP11.69□□□□□ -0.54
RBM28-202ENST00000415472 C10orf120Q5SQS8 335 aa11.69□□□□□ -0.54
RBM28-202ENST00000415472 KLC3Q6P597 504 aa11.69□□□□□ -0.54
RBM28-202ENST00000415472 GLB1LQ6UWU2 654 aa11.69□□□□□ -0.54
RBM28-202ENST00000415472 CYP2R1Q6VVX0 501 aa11.69□□□□□ -0.54
RBM28-202ENST00000415472 LARP4Q71RC2 724 aaKnown RBP eCLIP11.69□□□□□ -0.54
RBM28-202ENST00000415472 RETREG3Q86VR2 466 aa11.69□□□□□ -0.54
RBM28-202ENST00000415472 SLCO4A1Q96BD0 722 aa11.69□□□□□ -0.54
RBM28-202ENST00000415472 CNBD2Q96M20 576 aa11.69□□□□□ -0.54
RBM28-202ENST00000415472 RPRD1AQ96P16 312 aaPredicted RBP11.69□□□□□ -0.54
RBM28-202ENST00000415472 CCSER2Q9H7U1 834 aa11.69□□□□□ -0.54
RBM28-202ENST00000415472 SPC25Q9HBM1 224 aa11.69□□□□□ -0.54
RBM28-202ENST00000415472 SPATS2LQ9NUQ6 558 aaKnown RBP11.69□□□□□ -0.54
RBM28-202ENST00000415472 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.69□□□□□ -0.542e-7■□□□□ 10.3
RBM28-202ENST00000415472 MARCH2Q9P0N8 246 aa11.69□□□□□ -0.54
RBM28-202ENST00000415472 AP4B1Q9Y6B7 739 aa11.69□□□□□ -0.54
RBM28-202ENST00000415472 FRMPD3Q5JV73 1810 aa11.68□□□□□ -0.54
RBM28-202ENST00000415472 SLC12A8A0AV02 714 aa11.68□□□□□ -0.54
RBM28-202ENST00000415472 DENRO43583 198 aaKnown RBP11.68□□□□□ -0.54
RBM28-202ENST00000415472 RAMP2O60895 175 aa11.68□□□□□ -0.54
RBM28-202ENST00000415472 TRPA1O75762 1119 aa11.68□□□□□ -0.54
RBM28-202ENST00000415472 MTHFD2P13995 350 aa11.68□□□□□ -0.54
RBM28-202ENST00000415472 ELNP15502 786 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms