RNA–Protein interactions for RNA: ENST00000415281.1

NCKIPSD-203, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-203ENST00000415281 AMPD1P23109 780 aa12.48□□□□□ -0.41
NCKIPSD-203ENST00000415281 MTM1Q13496 603 aa12.48□□□□□ -0.41
NCKIPSD-203ENST00000415281 BRAT1Q6PJG6 821 aa12.48□□□□□ -0.41
NCKIPSD-203ENST00000415281 LVRNQ6Q4G3 990 aa12.48□□□□□ -0.41
NCKIPSD-203ENST00000415281 DPPA4Q7L190 304 aa12.48□□□□□ -0.41
NCKIPSD-203ENST00000415281 RD3Q7Z3Z2 195 aa12.48□□□□□ -0.41
NCKIPSD-203ENST00000415281 CLEC14AQ86T13 490 aa12.48□□□□□ -0.41
NCKIPSD-203ENST00000415281 NRROSQ86YC3 692 aa12.48□□□□□ -0.41
NCKIPSD-203ENST00000415281 CPNE8Q86YQ8 564 aa12.48□□□□□ -0.41
NCKIPSD-203ENST00000415281 FSTL5Q8N475 847 aaPredicted RBP12.48□□□□□ -0.41
NCKIPSD-203ENST00000415281 TPCN2Q8NHX9 752 aa12.48□□□□□ -0.41
NCKIPSD-203ENST00000415281 FNIP1Q8TF40 1166 aa12.48□□□□□ -0.41
NCKIPSD-203ENST00000415281 COQ10AQ96MF6 247 aa12.48□□□□□ -0.41
NCKIPSD-203ENST00000415281 LGMNQ99538 433 aa12.48□□□□□ -0.41
NCKIPSD-203ENST00000415281 NCKIPSDQ9NZQ3 722 aa12.48□□□□□ -0.41
NCKIPSD-203ENST00000415281 SIRPGQ9P1W8 387 aa12.48□□□□□ -0.41
NCKIPSD-203ENST00000415281 MYO1AQ9UBC5 1043 aa12.48□□□□□ -0.41
NCKIPSD-203ENST00000415281 GULP1Q9UBP9 304 aa12.48□□□□□ -0.41
NCKIPSD-203ENST00000415281 CNOT8Q9UFF9 292 aaKnown RBP12.48□□□□□ -0.41
NCKIPSD-203ENST00000415281 PCDHGC4Q9Y5F7 938 aa12.48□□□□□ -0.41
NCKIPSD-203ENST00000415281 ARHGAP42A6NI28 874 aa12.47□□□□□ -0.41
NCKIPSD-203ENST00000415281 AKR1B15C9JRZ8 316 aaPredicted RBP12.47□□□□□ -0.41
NCKIPSD-203ENST00000415281 KLK10O43240 276 aa12.47□□□□□ -0.41
NCKIPSD-203ENST00000415281 RASGRP1O95267 797 aa12.47□□□□□ -0.41
NCKIPSD-203ENST00000415281 PCCBP05166 539 aa12.47□□□□□ -0.41
NCKIPSD-203ENST00000415281 HOXC4P09017 264 aaPredicted RBP12.47□□□□□ -0.41
NCKIPSD-203ENST00000415281 HNRNPH3P31942 346 aaKnown RBP12.47□□□□□ -0.41
NCKIPSD-203ENST00000415281 TBX2Q13207 712 aaPredicted RBP12.47□□□□□ -0.41
NCKIPSD-203ENST00000415281 SRSF6Q13247 344 aaKnown RBP12.47□□□□□ -0.41
NCKIPSD-203ENST00000415281 CLN3Q13286 438 aa12.47□□□□□ -0.41
NCKIPSD-203ENST00000415281 GRM3Q14832 879 aa12.47□□□□□ -0.41
NCKIPSD-203ENST00000415281 PPP6R3Q5H9R7 873 aaPredicted RBP12.47□□□□□ -0.41
NCKIPSD-203ENST00000415281 ARHGAP40Q5TG30 622 aa12.47□□□□□ -0.41
NCKIPSD-203ENST00000415281 PPP1R2P3Q6NXS1 205 aa12.47□□□□□ -0.41
NCKIPSD-203ENST00000415281 RFLNAQ6ZTI6 216 aa12.47□□□□□ -0.41
NCKIPSD-203ENST00000415281 POLNQ7Z5Q5 900 aa12.47□□□□□ -0.41
NCKIPSD-203ENST00000415281 C17orf82Q86X59 251 aaPredicted RBP12.47□□□□□ -0.41
NCKIPSD-203ENST00000415281 SDR16C5Q8N3Y7 309 aa12.47□□□□□ -0.41
NCKIPSD-203ENST00000415281 ARL10Q8N8L6 244 aa12.47□□□□□ -0.41
NCKIPSD-203ENST00000415281 GRAMD1AQ96CP6 724 aa12.47□□□□□ -0.41
NCKIPSD-203ENST00000415281 WDR92Q96MX6 357 aa12.47□□□□□ -0.41
NCKIPSD-203ENST00000415281 DNAJC7Q99615 494 aa12.47□□□□□ -0.41
NCKIPSD-203ENST00000415281 CHP1Q99653 195 aa12.47□□□□□ -0.41
NCKIPSD-203ENST00000415281 C1QTNF7Q9BXJ2 289 aa12.47□□□□□ -0.41
NCKIPSD-203ENST00000415281 DPH1Q9BZG8 443 aa12.47□□□□□ -0.41
NCKIPSD-203ENST00000415281 TMEM168Q9H0V1 697 aa12.47□□□□□ -0.41
NCKIPSD-203ENST00000415281 ABHD10Q9NUJ1 306 aa12.47□□□□□ -0.41
NCKIPSD-203ENST00000415281 SPATS2LQ9NUQ6 558 aaKnown RBP12.47□□□□□ -0.41
NCKIPSD-203ENST00000415281 B4GALT6Q9UBX8 382 aa12.47□□□□□ -0.41
NCKIPSD-203ENST00000415281 PIEZO2Q9H5I5 2752 aa12.47□□□□□ -0.41
NCKIPSD-203ENST00000415281 ASH1LQ9NR48 2969 aaKnown RBP12.46□□□□□ -0.41
NCKIPSD-203ENST00000415281 ANKRD62A6NC57 917 aa12.46□□□□□ -0.41
NCKIPSD-203ENST00000415281 EIF3CLB5ME19 914 aaKnown RBP12.46□□□□□ -0.41
NCKIPSD-203ENST00000415281 DFFAO00273 331 aa12.46□□□□□ -0.41
NCKIPSD-203ENST00000415281 B4GAT1O43505 415 aa12.46□□□□□ -0.41
NCKIPSD-203ENST00000415281 MFAP3LO75121 409 aa12.46□□□□□ -0.41
NCKIPSD-203ENST00000415281 TNFSF15O95150 251 aa12.46□□□□□ -0.41
NCKIPSD-203ENST00000415281 RARAP10276 462 aa12.46□□□□□ -0.41
NCKIPSD-203ENST00000415281 HGFP14210 728 aa12.46□□□□□ -0.41
NCKIPSD-203ENST00000415281 LHCGRP22888 699 aa12.46□□□□□ -0.41
NCKIPSD-203ENST00000415281 SERPINA4P29622 427 aa12.46□□□□□ -0.41
NCKIPSD-203ENST00000415281 SCNN1BP51168 640 aa12.46□□□□□ -0.41
NCKIPSD-203ENST00000415281 ARSEP51690 589 aa12.46□□□□□ -0.41
NCKIPSD-203ENST00000415281 KIAA1024LP59773 190 aa12.46□□□□□ -0.41
NCKIPSD-203ENST00000415281 B4GALNT1Q00973 533 aa12.46□□□□□ -0.41
NCKIPSD-203ENST00000415281 ZFP36L1Q07352 338 aaKnown RBP12.46□□□□□ -0.41
NCKIPSD-203ENST00000415281 BCL2L1Q07817 233 aa12.46□□□□□ -0.41
NCKIPSD-203ENST00000415281 TRAF2Q12933 501 aa12.46□□□□□ -0.41
NCKIPSD-203ENST00000415281 HLTFQ14527 1009 aaKnown RBP eCLIP12.46□□□□□ -0.41
NCKIPSD-203ENST00000415281 RFTN1Q14699 578 aaPredicted RBP12.46□□□□□ -0.41
NCKIPSD-203ENST00000415281 LBRQ14739 615 aaKnown RBP12.46□□□□□ -0.41
NCKIPSD-203ENST00000415281 ELOCQ15369 112 aa12.46□□□□□ -0.41
NCKIPSD-203ENST00000415281 CNGA3Q16281 694 aa12.46□□□□□ -0.41
NCKIPSD-203ENST00000415281 DPYSL2Q16555 572 aa12.46□□□□□ -0.41
NCKIPSD-203ENST00000415281 CCDC122Q5T0U0 273 aa12.46□□□□□ -0.41
NCKIPSD-203ENST00000415281 ESRP1Q6NXG1 681 aaKnown RBP12.46□□□□□ -0.41
NCKIPSD-203ENST00000415281 PNCKQ6P2M8 343 aa12.46□□□□□ -0.41
NCKIPSD-203ENST00000415281 HSD11B1LQ7Z5J1 315 aa12.46□□□□□ -0.41
NCKIPSD-203ENST00000415281 PSTKQ8IV42 348 aaKnown RBP12.46□□□□□ -0.41
NCKIPSD-203ENST00000415281 OR56A4Q8NGH8 313 aa12.46□□□□□ -0.41
NCKIPSD-203ENST00000415281 WDR36Q8NI36 951 aaKnown RBP12.46□□□□□ -0.41
NCKIPSD-203ENST00000415281 FAM71BQ8TC56 605 aa12.46□□□□□ -0.41
NCKIPSD-203ENST00000415281 KCNE4Q8WWG9 221 aa12.46□□□□□ -0.41
NCKIPSD-203ENST00000415281 NAT6Q93015 286 aa12.46□□□□□ -0.41
NCKIPSD-203ENST00000415281 ZNF653Q96CK0 615 aa12.46□□□□□ -0.41
NCKIPSD-203ENST00000415281 LIN37Q96GY3 246 aaPredicted RBP12.46□□□□□ -0.41
NCKIPSD-203ENST00000415281 MRFAP1L1Q96HT8 127 aa12.46□□□□□ -0.41
NCKIPSD-203ENST00000415281 BTBD6Q96KE9 485 aa12.46□□□□□ -0.41
NCKIPSD-203ENST00000415281 EIF3CQ99613 913 aaKnown RBP12.46□□□□□ -0.41
NCKIPSD-203ENST00000415281 NCAPGQ9BPX3 1015 aa12.46□□□□□ -0.41
NCKIPSD-203ENST00000415281 FOXP3Q9BZS1 431 aa12.46□□□□□ -0.41
NCKIPSD-203ENST00000415281 DEF6Q9H4E7 631 aa12.46□□□□□ -0.41
NCKIPSD-203ENST00000415281 ATP13A3Q9H7F0 1226 aa12.46□□□□□ -0.41
NCKIPSD-203ENST00000415281 NOD2Q9HC29 1040 aa12.46□□□□□ -0.41
NCKIPSD-203ENST00000415281 KLQ9UEF7 1012 aa12.46□□□□□ -0.41
NCKIPSD-203ENST00000415281 APPL1Q9UKG1 709 aa12.46□□□□□ -0.41
NCKIPSD-203ENST00000415281 ATXN7L1Q9ULK2 861 aaPredicted RBP12.46□□□□□ -0.41
NCKIPSD-203ENST00000415281 GPR34Q9UPC5 381 aa12.46□□□□□ -0.41
NCKIPSD-203ENST00000415281 RNF215Q9Y6U7 377 aa12.46□□□□□ -0.41
NCKIPSD-203ENST00000415281 CCDC187A0A096LP49 1063 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms