RNA–Protein interactions for RNA: ENST00000415083.6

SS18-203, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SS18, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-203ENST00000415083 GAB3Q8WWW8 586 aa9.9□□□□□ -0.82
SS18-203ENST00000415083 NSMCE4AQ9NXX6 385 aa9.9□□□□□ -0.82
SS18-203ENST00000415083 RNF181Q9P0P0 153 aa9.9□□□□□ -0.82
SS18-203ENST00000415083 IPO11Q9UI26 975 aaKnown RBP9.9□□□□□ -0.82
SS18-203ENST00000415083 ST3GAL5Q9UNP4 418 aa9.9□□□□□ -0.82
SS18-203ENST00000415083 AAR2Q9Y312 384 aaKnown RBP9.9□□□□□ -0.82
SS18-203ENST00000415083 FRMPD3Q5JV73 1810 aa9.9□□□□□ -0.82
SS18-203ENST00000415083 ZNF839A8K0R7 811 aa9.9□□□□□ -0.82
SS18-203ENST00000415083 E9PAM4 449 aa9.9□□□□□ -0.82
SS18-203ENST00000415083 PDLIM1O00151 329 aa9.9□□□□□ -0.82
SS18-203ENST00000415083 LDB2O43679 373 aa9.9□□□□□ -0.82
SS18-203ENST00000415083 F9P00740 461 aa9.9□□□□□ -0.82
SS18-203ENST00000415083 OR4Q2P0C623 313 aa9.9□□□□□ -0.82
SS18-203ENST00000415083 RGS2P41220 211 aa9.9□□□□□ -0.82
SS18-203ENST00000415083 LHX1P48742 406 aa9.9□□□□□ -0.82
SS18-203ENST00000415083 GPR15P49685 360 aa9.9□□□□□ -0.82
SS18-203ENST00000415083 SCNN1BP51168 640 aa9.9□□□□□ -0.82
SS18-203ENST00000415083 DSC2Q02487 901 aa9.9□□□□□ -0.82
SS18-203ENST00000415083 PYCR3Q53H96 274 aa9.9□□□□□ -0.82
SS18-203ENST00000415083 FBXO48Q5FWF7 155 aa9.9□□□□□ -0.82
SS18-203ENST00000415083 BORAQ6PGQ7 559 aa9.9□□□□□ -0.82
SS18-203ENST00000415083 B3GNT6Q6ZMB0 384 aa9.9□□□□□ -0.82
SS18-203ENST00000415083 PIP4K2CQ8TBX8 421 aa9.9□□□□□ -0.82
SS18-203ENST00000415083 NUDT8Q8WV74 236 aa9.9□□□□□ -0.82
SS18-203ENST00000415083 IMP4Q96G21 291 aaKnown RBP9.9□□□□□ -0.82
SS18-203ENST00000415083 TSPAN18Q96SJ8 248 aa9.9□□□□□ -0.82
SS18-203ENST00000415083 ALG9Q9H6U8 611 aa9.9□□□□□ -0.82
SS18-203ENST00000415083 AKTIPQ9H8T0 292 aa9.9□□□□□ -0.82
SS18-203ENST00000415083 VCX3AQ9NNX9 186 aa9.9□□□□□ -0.82
SS18-203ENST00000415083 CMTM6Q9NX76 183 aa9.9□□□□□ -0.82
SS18-203ENST00000415083 TRAF6Q9Y4K3 522 aa9.9□□□□□ -0.82
SS18-203ENST00000415083 ACTL7AQ9Y615 435 aa9.9□□□□□ -0.82
SS18-203ENST00000415083 ANKRD12Q6UB98 2062 aa9.9□□□□□ -0.83
SS18-203ENST00000415083 CCL15-CCL14A0A0B4J2E2 113 aa9.89□□□□□ -0.83
SS18-203ENST00000415083 H0Y858 1186 aa9.89□□□□□ -0.83
SS18-203ENST00000415083 ACOX3O15254 700 aa9.89□□□□□ -0.83
SS18-203ENST00000415083 POLD2P49005 469 aa9.89□□□□□ -0.83
SS18-203ENST00000415083 SLC7A2P52569 658 aa9.89□□□□□ -0.83
SS18-203ENST00000415083 SEPT6Q14141 434 aa9.89□□□□□ -0.83
SS18-203ENST00000415083 SQLEQ14534 574 aa9.89□□□□□ -0.83
SS18-203ENST00000415083 CCL15Q16663 113 aa9.89□□□□□ -0.83
SS18-203ENST00000415083 PLA2G4EQ3MJ16 856 aa9.89□□□□□ -0.83
SS18-203ENST00000415083 FAM45BPQ6NSW5 357 aa9.89□□□□□ -0.83
SS18-203ENST00000415083 PPHLN1Q8NEY8 458 aaKnown RBP9.89□□□□□ -0.83
SS18-203ENST00000415083 FAM81AQ8TBF8 368 aa9.89□□□□□ -0.83
SS18-203ENST00000415083 ARRDC2Q8TBH0 407 aa9.89□□□□□ -0.83
SS18-203ENST00000415083 FAM45AQ8TCE6 357 aa9.89□□□□□ -0.83
SS18-203ENST00000415083 IRGQQ8WZA9 623 aa9.89□□□□□ -0.83
SS18-203ENST00000415083 HIC2Q96JB3 615 aa9.89□□□□□ -0.83
SS18-203ENST00000415083 SMIM14Q96QK8 99 aa9.89□□□□□ -0.83
SS18-203ENST00000415083 MRPL1Q9BYD6 325 aaKnown RBP9.89□□□□□ -0.83
SS18-203ENST00000415083 TLR9Q9NR96 1032 aa9.89□□□□□ -0.83
SS18-203ENST00000415083 ATXN10Q9UBB4 475 aa9.89□□□□□ -0.83
SS18-203ENST00000415083 ZNF225Q9UK10 706 aa9.89□□□□□ -0.83
SS18-203ENST00000415083 MKI67P46013 3256 aaKnown RBP9.89□□□□□ -0.83
SS18-203ENST00000415083 FAM149AA5PLN7 773 aa9.89□□□□□ -0.83
SS18-203ENST00000415083 TRIM64A6NGJ6 449 aa9.89□□□□□ -0.83
SS18-203ENST00000415083 TRIM64CA6NLI5 447 aa9.89□□□□□ -0.83
SS18-203ENST00000415083 UBDO15205 165 aa9.89□□□□□ -0.83
SS18-203ENST00000415083 XPOTO43592 962 aaKnown RBP9.89□□□□□ -0.83
SS18-203ENST00000415083 CDK14O94921 469 aa9.89□□□□□ -0.83
SS18-203ENST00000415083 PENKP01210 267 aaPredicted RBP9.89□□□□□ -0.83
SS18-203ENST00000415083 SLC7A1P30825 629 aa9.89□□□□□ -0.83
SS18-203ENST00000415083 CDC42EP1Q00587 391 aa9.89□□□□□ -0.83
SS18-203ENST00000415083 ECT2LQ008S8 904 aa9.89□□□□□ -0.83
SS18-203ENST00000415083 POLD3Q15054 466 aaPredicted RBP9.89□□□□□ -0.83
SS18-203ENST00000415083 SDHAF4Q5VUM1 108 aa9.89□□□□□ -0.83
SS18-203ENST00000415083 SCML4Q8N228 414 aa9.89□□□□□ -0.83
SS18-203ENST00000415083 TMEM86AQ8N2M4 240 aa9.89□□□□□ -0.83
SS18-203ENST00000415083 KLHDC9Q8NEP7 349 aa9.89□□□□□ -0.83
SS18-203ENST00000415083 TFAP2CQ92754 450 aa9.89□□□□□ -0.83
SS18-203ENST00000415083 L3HYPDHQ96EM0 354 aa9.89□□□□□ -0.83
SS18-203ENST00000415083 HMCESQ96FZ2 354 aa9.89□□□□□ -0.83
SS18-203ENST00000415083 SP110Q9HB58 689 aa9.89□□□□□ -0.83
SS18-203ENST00000415083 PRDM5Q9NQX1 630 aaPredicted RBP9.89□□□□□ -0.83
SS18-203ENST00000415083 ABCD2Q9UBJ2 740 aa9.89□□□□□ -0.83
SS18-203ENST00000415083 MID2Q9UJV3 735 aa9.89□□□□□ -0.83
SS18-203ENST00000415083 TRPC5OSA6NMA1 111 aa9.89□□□□□ -0.83
SS18-203ENST00000415083 TRPA1O75762 1119 aa9.89□□□□□ -0.83
SS18-203ENST00000415083 SNRPB2P08579 225 aaKnown RBP9.89□□□□□ -0.83
SS18-203ENST00000415083 MYL3P08590 195 aa9.89□□□□□ -0.83
SS18-203ENST00000415083 LTA4HP09960 611 aaKnown RBP9.89□□□□□ -0.83
SS18-203ENST00000415083 CD1DP15813 335 aa9.89□□□□□ -0.83
SS18-203ENST00000415083 IMPDH1P20839 514 aa9.89□□□□□ -0.83
SS18-203ENST00000415083 SLC5A3P53794 718 aa9.89□□□□□ -0.83
SS18-203ENST00000415083 HPCAP84074 193 aa9.89□□□□□ -0.83
SS18-203ENST00000415083 PURAQ00577 322 aaKnown RBP9.89□□□□□ -0.83
SS18-203ENST00000415083 PRPSAP1Q14558 356 aa9.89□□□□□ -0.83
SS18-203ENST00000415083 PLEKHH3Q7Z736 793 aa9.89□□□□□ -0.83
SS18-203ENST00000415083 SMOC2Q9H3U7 446 aa9.89□□□□□ -0.83
SS18-203ENST00000415083 ENTPD7Q9NQZ7 604 aa9.89□□□□□ -0.83
SS18-203ENST00000415083 RHBDL2Q9NX52 303 aa9.89□□□□□ -0.83
SS18-203ENST00000415083 GALPQ9UBC7 116 aa9.89□□□□□ -0.83
SS18-203ENST00000415083 PADI4Q9UM07 663 aa9.89□□□□□ -0.83
SS18-203ENST00000415083 DMTF1Q9Y222 760 aa9.89□□□□□ -0.83
SS18-203ENST00000415083 SNX13Q9Y5W8 968 aa9.89□□□□□ -0.83
SS18-203ENST00000415083 NRP2O60462 931 aa9.88□□□□□ -0.83
SS18-203ENST00000415083 CLIC3O95833 236 aa9.88□□□□□ -0.83
SS18-203ENST00000415083 POMCP01189 267 aa9.88□□□□□ -0.83
SS18-203ENST00000415083 THP07101 528 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms