RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 SLC2A4RGQ9NR83 387 aa15.6■□□□□ 0.09
SHMT2-202ENST00000414700 IL1RAPL1Q9NZN1 696 aa15.6■□□□□ 0.09
SHMT2-202ENST00000414700 SLC8A2Q9UPR5 921 aa15.6■□□□□ 0.09
SHMT2-202ENST00000414700 SPO11Q9Y5K1 396 aa15.6■□□□□ 0.09
SHMT2-202ENST00000414700 ANKRD66B4E2M5 251 aa15.59■□□□□ 0.09
SHMT2-202ENST00000414700 HTRA2O43464 458 aaPredicted RBP15.59■□□□□ 0.09
SHMT2-202ENST00000414700 PGLSO95336 258 aa15.59■□□□□ 0.09
SHMT2-202ENST00000414700 CHN1P15882 459 aa15.59■□□□□ 0.09
SHMT2-202ENST00000414700 HLA-DPA1P20036 260 aa15.59■□□□□ 0.09
SHMT2-202ENST00000414700 RECQLP46063 649 aaPredicted RBP15.59■□□□□ 0.09
SHMT2-202ENST00000414700 ARSIQ5FYB1 569 aa15.59■□□□□ 0.09
SHMT2-202ENST00000414700 UNC5AQ6ZN44 842 aa15.59■□□□□ 0.09
SHMT2-202ENST00000414700 TPRG1Q6ZUI0 275 aa15.59■□□□□ 0.09
SHMT2-202ENST00000414700 C3orf62Q6ZUJ4 267 aa15.59■□□□□ 0.09
SHMT2-202ENST00000414700 PALM2Q8IXS6 379 aa15.59■□□□□ 0.09
SHMT2-202ENST00000414700 CHPFQ8IZ52 775 aa15.59■□□□□ 0.09
SHMT2-202ENST00000414700 STK40Q8N2I9 435 aa15.59■□□□□ 0.09
SHMT2-202ENST00000414700 LRRC39Q96DD0 335 aa15.59■□□□□ 0.09
SHMT2-202ENST00000414700 MFSD3Q96ES6 412 aa15.59■□□□□ 0.09
SHMT2-202ENST00000414700 ANKRD27Q96NW4 1050 aa15.59■□□□□ 0.09
SHMT2-202ENST00000414700 FCRL3Q96P31 734 aaPredicted RBP15.59■□□□□ 0.09
SHMT2-202ENST00000414700 IL22Q9GZX6 179 aa15.59■□□□□ 0.09
SHMT2-202ENST00000414700 CCDC134Q9H6E4 229 aa15.59■□□□□ 0.09
SHMT2-202ENST00000414700 C8orf33Q9H7E9 229 aaPredicted RBP15.59■□□□□ 0.09
SHMT2-202ENST00000414700 VPS37BQ9H9H4 285 aa15.59■□□□□ 0.09
SHMT2-202ENST00000414700 SARDHQ9UL12 918 aa15.59■□□□□ 0.09
SHMT2-202ENST00000414700 DUSP12Q9UNI6 340 aa15.59■□□□□ 0.09
SHMT2-202ENST00000414700 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.58■□□□□ 0.09
SHMT2-202ENST00000414700 AURKAO14965 403 aa15.58■□□□□ 0.09
SHMT2-202ENST00000414700 FGF1P05230 155 aa15.58■□□□□ 0.09
SHMT2-202ENST00000414700 EPHX1P07099 455 aa15.58■□□□□ 0.09
SHMT2-202ENST00000414700 ALPIP09923 528 aa15.58■□□□□ 0.09
SHMT2-202ENST00000414700 CTPS1P17812 591 aa15.58■□□□□ 0.09
SHMT2-202ENST00000414700 SERPINA4P29622 427 aa15.58■□□□□ 0.09
SHMT2-202ENST00000414700 NPY2RP49146 381 aa15.58■□□□□ 0.09
SHMT2-202ENST00000414700 NCALDP61601 193 aa15.58■□□□□ 0.09
SHMT2-202ENST00000414700 PFKPQ01813 784 aa15.58■□□□□ 0.09
SHMT2-202ENST00000414700 LRRC73Q5JTD7 316 aa15.58■□□□□ 0.09
SHMT2-202ENST00000414700 ARMC12Q5T9G4 340 aa15.58■□□□□ 0.09
SHMT2-202ENST00000414700 CEP128Q6ZU80 1094 aa15.58■□□□□ 0.09
SHMT2-202ENST00000414700 NUDT18Q6ZVK8 323 aa15.58■□□□□ 0.09
SHMT2-202ENST00000414700 PLPP6Q8IY26 295 aa15.58■□□□□ 0.09
SHMT2-202ENST00000414700 LRRC34Q8IZ02 419 aa15.58■□□□□ 0.09
SHMT2-202ENST00000414700 KDM1BQ8NB78 822 aa15.58■□□□□ 0.09
SHMT2-202ENST00000414700 BLOC1S5Q8TDH9 187 aa15.58■□□□□ 0.09
SHMT2-202ENST00000414700 PIH1D2Q8WWB5 315 aa15.58■□□□□ 0.09
SHMT2-202ENST00000414700 HEPHQ9BQS7 1158 aa15.58■□□□□ 0.09
SHMT2-202ENST00000414700 CPEB1Q9BZB8 566 aaKnown RBP15.58■□□□□ 0.09
SHMT2-202ENST00000414700 SUV39H2Q9H5I1 410 aa15.58■□□□□ 0.09
SHMT2-202ENST00000414700 ARIH1Q9Y4X5 557 aaPredicted RBP15.58■□□□□ 0.09
SHMT2-202ENST00000414700 STON1Q9Y6Q2 735 aa15.58■□□□□ 0.09
SHMT2-202ENST00000414700 NCOR1O75376 2440 aa15.58■□□□□ 0.09
SHMT2-202ENST00000414700 USP34Q70CQ2 3546 aa15.58■□□□□ 0.08
SHMT2-202ENST00000414700 BUD23O43709 281 aaKnown RBP15.58■□□□□ 0.08
SHMT2-202ENST00000414700 AHCYL1O43865 530 aa15.58■□□□□ 0.08
SHMT2-202ENST00000414700 SOCS5O75159 536 aa15.58■□□□□ 0.08
SHMT2-202ENST00000414700 HNRNPLP14866 589 aaKnown RBP eCLIP15.58■□□□□ 0.08
SHMT2-202ENST00000414700 NMBRP28336 390 aa15.58■□□□□ 0.08
SHMT2-202ENST00000414700 TNFRSF4P43489 277 aa15.58■□□□□ 0.08
SHMT2-202ENST00000414700 MAPK8P45983 427 aa15.58■□□□□ 0.08
SHMT2-202ENST00000414700 SEMG2Q02383 582 aa15.58■□□□□ 0.08
SHMT2-202ENST00000414700 SEPT6Q14141 434 aa15.58■□□□□ 0.08
SHMT2-202ENST00000414700 TRMT10BQ6PF06 316 aaKnown RBP15.58■□□□□ 0.08
SHMT2-202ENST00000414700 SPDYE1Q8NFV5 336 aaPredicted RBP15.58■□□□□ 0.08
SHMT2-202ENST00000414700 ECHDC3Q96DC8 303 aa15.58■□□□□ 0.08
SHMT2-202ENST00000414700 KLHL32Q96NJ5 620 aa15.58■□□□□ 0.08
SHMT2-202ENST00000414700 CPSF2Q9P2I0 782 aaKnown RBP15.58■□□□□ 0.08
SHMT2-202ENST00000414700 SLC2A6Q9UGQ3 507 aa15.58■□□□□ 0.08
SHMT2-202ENST00000414700 IL36AQ9UHA7 158 aa15.58■□□□□ 0.08
SHMT2-202ENST00000414700 KCTD3Q9Y597 815 aa15.58■□□□□ 0.08
SHMT2-202ENST00000414700 ARL5AQ9Y689 179 aa15.58■□□□□ 0.08
SHMT2-202ENST00000414700 RPS6KL1Q9Y6S9 549 aa15.58■□□□□ 0.08
SHMT2-202ENST00000414700 EDDM13A0A1B0GTR0 161 aa15.57■□□□□ 0.08
SHMT2-202ENST00000414700 TCRBV9S1A1TA0A576 114 aa15.57■□□□□ 0.08
SHMT2-202ENST00000414700 A6NHS1 94 aa15.57■□□□□ 0.08
SHMT2-202ENST00000414700 FESP07332 822 aa15.57■□□□□ 0.08
SHMT2-202ENST00000414700 CCNG1P51959 295 aa15.57■□□□□ 0.08
SHMT2-202ENST00000414700 ENPP2Q13822 863 aa15.57■□□□□ 0.08
SHMT2-202ENST00000414700 PTPRCAPQ14761 206 aa15.57■□□□□ 0.08
SHMT2-202ENST00000414700 TMEM135Q86UB9 458 aa15.57■□□□□ 0.08
SHMT2-202ENST00000414700 MDGA1Q8NFP4 955 aa15.57■□□□□ 0.08
SHMT2-202ENST00000414700 FAM3CQ92520 227 aa15.57■□□□□ 0.08
SHMT2-202ENST00000414700 PGM2Q96G03 612 aa15.57■□□□□ 0.08
SHMT2-202ENST00000414700 TUBGCP5Q96RT8 1024 aa15.57■□□□□ 0.08
SHMT2-202ENST00000414700 FAM129BQ96TA1 746 aa15.57■□□□□ 0.08
SHMT2-202ENST00000414700 SELENOSQ9BQE4 189 aa15.57■□□□□ 0.08
SHMT2-202ENST00000414700 ADGRE3Q9BY15 652 aa15.57■□□□□ 0.08
SHMT2-202ENST00000414700 PRSS16Q9NQE7 514 aa15.57■□□□□ 0.08
SHMT2-202ENST00000414700 PRKAG3Q9UGI9 489 aa15.57■□□□□ 0.08
SHMT2-202ENST00000414700 CA14Q9ULX7 337 aa15.57■□□□□ 0.08
SHMT2-202ENST00000414700 SOX13Q9UN79 622 aa15.57■□□□□ 0.08
SHMT2-202ENST00000414700 ENO4A6NNW6 628 aa15.56■□□□□ 0.08
SHMT2-202ENST00000414700 SLC4A1P02730 911 aa15.56■□□□□ 0.08
SHMT2-202ENST00000414700 ABL2P42684 1182 aa15.56■□□□□ 0.08
SHMT2-202ENST00000414700 EPHB1P54762 984 aa15.56■□□□□ 0.08
SHMT2-202ENST00000414700 RAD51Q06609 339 aa15.56■□□□□ 0.08
SHMT2-202ENST00000414700 GRSF1Q12849 480 aaKnown RBP eCLIP15.56■□□□□ 0.08
SHMT2-202ENST00000414700 EFTUD2Q15029 972 aaKnown RBP eCLIP15.56■□□□□ 0.084e-8■■■■■ 44
SHMT2-202ENST00000414700 PCID2Q5JVF3 399 aa15.56■□□□□ 0.08
SHMT2-202ENST00000414700 GDPD4Q6W3E5 623 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms