RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 RNF135Q8IUD6 432 aa16.73■□□□□ 0.27
LIMS2-208ENST00000410011 AQP12AQ8IXF9 295 aa16.73■□□□□ 0.27
LIMS2-208ENST00000410011 OR2T34Q8NGX1 318 aa16.73■□□□□ 0.27
LIMS2-208ENST00000410011 OR2T3Q8NH03 318 aa16.73■□□□□ 0.27
LIMS2-208ENST00000410011 EZH1Q92800 747 aaPredicted RBP16.73■□□□□ 0.27
LIMS2-208ENST00000410011 PHF21BQ96EK2 531 aa16.73■□□□□ 0.27
LIMS2-208ENST00000410011 C19orf60Q96EN9 201 aa16.73■□□□□ 0.27
LIMS2-208ENST00000410011 POPDC3Q9HBV1 291 aa16.73■□□□□ 0.27
LIMS2-208ENST00000410011 SFMBT1Q9UHJ3 866 aa16.73■□□□□ 0.27
LIMS2-208ENST00000410011 NDUFAF1Q9Y375 327 aa16.73■□□□□ 0.27
LIMS2-208ENST00000410011 FIS1Q9Y3D6 152 aa16.73■□□□□ 0.27
LIMS2-208ENST00000410011 AK5Q9Y6K8 562 aa16.73■□□□□ 0.27
LIMS2-208ENST00000410011 H3BNH8 94 aa16.73■□□□□ 0.27
LIMS2-208ENST00000410011 SPATA31D3P0C874 917 aa16.73■□□□□ 0.27
LIMS2-208ENST00000410011 SLC2A3P11169 496 aa16.73■□□□□ 0.27
LIMS2-208ENST00000410011 CDH2P19022 906 aaPredicted RBP16.73■□□□□ 0.27
LIMS2-208ENST00000410011 SLC5A3P53794 718 aa16.73■□□□□ 0.27
LIMS2-208ENST00000410011 NRF1Q16656 503 aa16.73■□□□□ 0.27
LIMS2-208ENST00000410011 LRRC23Q53EV4 343 aaPredicted RBP16.73■□□□□ 0.27
LIMS2-208ENST00000410011 COQ5Q5HYK3 327 aa16.73■□□□□ 0.27
LIMS2-208ENST00000410011 NHSL2Q5HYW2 709 aa16.73■□□□□ 0.27
LIMS2-208ENST00000410011 TMEM207Q6UWW9 146 aa16.73■□□□□ 0.27
LIMS2-208ENST00000410011 SPATA31D4Q6ZUB0 917 aa16.73■□□□□ 0.27
LIMS2-208ENST00000410011 THEM5Q8N1Q8 247 aa16.73■□□□□ 0.27
LIMS2-208ENST00000410011 MINDY1Q8N5J2 469 aa16.73■□□□□ 0.27
LIMS2-208ENST00000410011 LPPQ93052 612 aa16.73■□□□□ 0.27
LIMS2-208ENST00000410011 CCM2LQ9NUG4 571 aaPredicted RBP16.73■□□□□ 0.27
LIMS2-208ENST00000410011 OLAHQ9NV23 265 aa16.73■□□□□ 0.27
LIMS2-208ENST00000410011 SNX13Q9Y5W8 968 aa16.73■□□□□ 0.27
LIMS2-208ENST00000410011 B3GAT3O94766 335 aa16.72■□□□□ 0.27
LIMS2-208ENST00000410011 RHOQP17081 205 aa16.72■□□□□ 0.27
LIMS2-208ENST00000410011 KCNC1P48547 511 aa16.72■□□□□ 0.27
LIMS2-208ENST00000410011 SUOXP51687 545 aa16.72■□□□□ 0.27
LIMS2-208ENST00000410011 INTS11Q5TA45 600 aaKnown RBP16.72■□□□□ 0.27
LIMS2-208ENST00000410011 MARC1Q5VT66 337 aa16.72■□□□□ 0.27
LIMS2-208ENST00000410011 HMBOX1Q6NT76 420 aa16.72■□□□□ 0.27
LIMS2-208ENST00000410011 ERMP1Q7Z2K6 904 aa16.72■□□□□ 0.27
LIMS2-208ENST00000410011 C14orf80Q86SX3 495 aa16.72■□□□□ 0.27
LIMS2-208ENST00000410011 MFSD2AQ8NA29 543 aa16.72■□□□□ 0.27
LIMS2-208ENST00000410011 GPR150Q8NGU9 434 aa16.72■□□□□ 0.27
LIMS2-208ENST00000410011 OR10T2Q8NGX3 314 aa16.72■□□□□ 0.27
LIMS2-208ENST00000410011 RHEBL1Q8TAI7 183 aa16.72■□□□□ 0.27
LIMS2-208ENST00000410011 SLC39A13Q96H72 371 aa16.72■□□□□ 0.27
LIMS2-208ENST00000410011 C8orf4Q9NR00 106 aa16.72■□□□□ 0.27
LIMS2-208ENST00000410011 FLRT1Q9NZU1 646 aa16.72■□□□□ 0.27
LIMS2-208ENST00000410011 TLR6Q9Y2C9 796 aa16.72■□□□□ 0.27
LIMS2-208ENST00000410011 MYRFQ9Y2G1 1151 aa16.72■□□□□ 0.27
LIMS2-208ENST00000410011 PTPRDP23468 1912 aa16.72■□□□□ 0.27
LIMS2-208ENST00000410011 LOC285095A0A1B0GVY8 99 aa16.71■□□□□ 0.27
LIMS2-208ENST00000410011 SUPT7LO94864 414 aa16.71■□□□□ 0.27
LIMS2-208ENST00000410011 MATN4O95460 622 aa16.71■□□□□ 0.27
LIMS2-208ENST00000410011 MMP2P08253 660 aa16.71■□□□□ 0.27
LIMS2-208ENST00000410011 HSD17B1P14061 328 aa16.71■□□□□ 0.27
LIMS2-208ENST00000410011 HDCP19113 662 aa16.71■□□□□ 0.27
LIMS2-208ENST00000410011 FDXRP22570 491 aa16.71■□□□□ 0.27
LIMS2-208ENST00000410011 CDKN2DP55273 166 aa16.71■□□□□ 0.27
LIMS2-208ENST00000410011 BEX3Q00994 111 aa16.71■□□□□ 0.27
LIMS2-208ENST00000410011 TSPY1Q01534 308 aa16.71■□□□□ 0.27
LIMS2-208ENST00000410011 RALGDSQ12967 914 aa16.71■□□□□ 0.27
LIMS2-208ENST00000410011 PCSK7Q16549 785 aa16.71■□□□□ 0.27
LIMS2-208ENST00000410011 MSANTD2Q6P1R3 559 aa16.71■□□□□ 0.27
LIMS2-208ENST00000410011 KDELC2Q7Z4H8 507 aa16.71■□□□□ 0.27
LIMS2-208ENST00000410011 ZNF683Q8IZ20 524 aa16.71■□□□□ 0.27
LIMS2-208ENST00000410011 TSPEARQ8WU66 669 aa16.71■□□□□ 0.27
LIMS2-208ENST00000410011 SLC29A1Q99808 456 aa16.71■□□□□ 0.27
LIMS2-208ENST00000410011 SEMA6AQ9H2E6 1030 aa16.71■□□□□ 0.27
LIMS2-208ENST00000410011 PRDM5Q9NQX1 630 aaPredicted RBP16.71■□□□□ 0.27
LIMS2-208ENST00000410011 TMEM248Q9NWD8 314 aa16.71■□□□□ 0.27
LIMS2-208ENST00000410011 TUBA8Q9NY65 449 aaPredicted RBP16.71■□□□□ 0.27
LIMS2-208ENST00000410011 MPP6Q9NZW5 540 aa16.71■□□□□ 0.27
LIMS2-208ENST00000410011 PTBP2Q9UKA9 531 aaKnown RBP16.71■□□□□ 0.27
LIMS2-208ENST00000410011 CNOT6Q9ULM6 557 aaKnown RBP16.71■□□□□ 0.27
LIMS2-208ENST00000410011 GPR182O15218 404 aa16.71■□□□□ 0.27
LIMS2-208ENST00000410011 MSI1O43347 362 aaKnown RBP16.71■□□□□ 0.27
LIMS2-208ENST00000410011 HNRNPRO43390 633 aaKnown RBP16.71■□□□□ 0.27
LIMS2-208ENST00000410011 HTRA2O43464 458 aaPredicted RBP16.71■□□□□ 0.27
LIMS2-208ENST00000410011 KPNA6O60684 536 aa16.71■□□□□ 0.27
LIMS2-208ENST00000410011 TYMPP19971 482 aa16.71■□□□□ 0.27
LIMS2-208ENST00000410011 YWHAQP27348 245 aa16.71■□□□□ 0.27
LIMS2-208ENST00000410011 MRPL19P49406 292 aaKnown RBP16.71■□□□□ 0.27
LIMS2-208ENST00000410011 PLK1P53350 603 aa16.71■□□□□ 0.27
LIMS2-208ENST00000410011 ATP6V0D1P61421 351 aa16.71■□□□□ 0.27
LIMS2-208ENST00000410011 BNIP2Q12982 314 aa16.71■□□□□ 0.27
LIMS2-208ENST00000410011 FSCN1Q16658 493 aaKnown RBP16.71■□□□□ 0.27
LIMS2-208ENST00000410011 MTX3Q5HYI7 312 aa16.71■□□□□ 0.27
LIMS2-208ENST00000410011 GPR158Q5T848 1215 aa16.71■□□□□ 0.27
LIMS2-208ENST00000410011 OVOS1Q6IE37 1185 aa16.71■□□□□ 0.27
LIMS2-208ENST00000410011 ZBTB49Q6ZSB9 765 aa16.71■□□□□ 0.27
LIMS2-208ENST00000410011 AMIGO2Q86SJ2 522 aa16.71■□□□□ 0.27
LIMS2-208ENST00000410011 NUP93Q8N1F7 819 aa16.71■□□□□ 0.27
LIMS2-208ENST00000410011 RSPH1Q8WYR4 309 aa16.71■□□□□ 0.27
LIMS2-208ENST00000410011 TFAP2CQ92754 450 aa16.71■□□□□ 0.27
LIMS2-208ENST00000410011 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.71■□□□□ 0.27
LIMS2-208ENST00000410011 UROC1Q96N76 676 aa16.71■□□□□ 0.27
LIMS2-208ENST00000410011 TRIM15Q9C019 465 aa16.71■□□□□ 0.27
LIMS2-208ENST00000410011 ZCWPW1Q9H0M4 648 aa16.71■□□□□ 0.27
LIMS2-208ENST00000410011 ALG9Q9H6U8 611 aa16.71■□□□□ 0.27
LIMS2-208ENST00000410011 AKTIPQ9H8T0 292 aa16.71■□□□□ 0.27
LIMS2-208ENST00000410011 RIMKLBQ9ULI2 386 aa16.71■□□□□ 0.27
LIMS2-208ENST00000410011 SLC8A2Q9UPR5 921 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms