RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 RABEP1Q15276 862 aa5.01□□□□□ -1.61
LSM5-205ENST00000409952 SHBQ15464 509 aa5.01□□□□□ -1.61
LSM5-205ENST00000409952 ERCC6LQ2NKX8 1250 aa5.01□□□□□ -1.61
LSM5-205ENST00000409952 WSCD2Q2TBF2 565 aa5.01□□□□□ -1.61
LSM5-205ENST00000409952 KBTBD12Q3ZCT8 623 aa5.01□□□□□ -1.61
LSM5-205ENST00000409952 LEXMQ3ZCV2 418 aa5.01□□□□□ -1.61
LSM5-205ENST00000409952 SLC39A12Q504Y0 691 aa5.01□□□□□ -1.61
LSM5-205ENST00000409952 PDCD4Q53EL6 469 aaKnown RBP5.01□□□□□ -1.61
LSM5-205ENST00000409952 USP39Q53GS9 565 aaKnown RBP5.01□□□□□ -1.61
LSM5-205ENST00000409952 ZNF618Q5T7W0 954 aa5.01□□□□□ -1.61
LSM5-205ENST00000409952 C1QL3Q5VWW1 255 aa5.01□□□□□ -1.61
LSM5-205ENST00000409952 B3GNTL1Q67FW5 361 aaPredicted RBP5.01□□□□□ -1.61
LSM5-205ENST00000409952 NAIF1Q69YI7 327 aaPredicted RBP5.01□□□□□ -1.61
LSM5-205ENST00000409952 TAOK1Q7L7X3 1001 aa5.01□□□□□ -1.61
LSM5-205ENST00000409952 ZNF551Q7Z340 670 aaPredicted RBP5.01□□□□□ -1.61
LSM5-205ENST00000409952 MCEMP1Q8IX19 187 aa5.01□□□□□ -1.61
LSM5-205ENST00000409952 RNF168Q8IYW5 571 aaPredicted RBP5.01□□□□□ -1.61
LSM5-205ENST00000409952 TMEM132CQ8N3T6 1108 aa5.01□□□□□ -1.61
LSM5-205ENST00000409952 ZBTB44Q8NCP5 570 aa5.01□□□□□ -1.61
LSM5-205ENST00000409952 B3GALNT2Q8NCR0 500 aa5.01□□□□□ -1.61
LSM5-205ENST00000409952 PSMA8Q8TAA3 256 aa5.01□□□□□ -1.61
LSM5-205ENST00000409952 FAM110DQ8TAY7 271 aaPredicted RBP5.01□□□□□ -1.61
LSM5-205ENST00000409952 CACTINQ8WUQ7 758 aaKnown RBP5.01□□□□□ -1.61
LSM5-205ENST00000409952 MIEF2Q96C03 454 aa5.01□□□□□ -1.61
LSM5-205ENST00000409952 RBM18Q96H35 190 aaKnown RBP5.01□□□□□ -1.61
LSM5-205ENST00000409952 TMEM68Q96MH6 324 aa5.01□□□□□ -1.61
LSM5-205ENST00000409952 CAMK1GQ96NX5 476 aa5.01□□□□□ -1.61
LSM5-205ENST00000409952 GPR78Q96P69 363 aa5.01□□□□□ -1.61
LSM5-205ENST00000409952 PRAM1Q96QH2 718 aa5.01□□□□□ -1.61
LSM5-205ENST00000409952 SNX18Q96RF0 628 aa5.01□□□□□ -1.61
LSM5-205ENST00000409952 BBS4Q96RK4 519 aa5.01□□□□□ -1.61
LSM5-205ENST00000409952 FAM118BQ9BPY3 351 aa5.01□□□□□ -1.61
LSM5-205ENST00000409952 UTP14AQ9BVJ6 771 aaKnown RBP5.01□□□□□ -1.61
LSM5-205ENST00000409952 TMPRSS5Q9H3S3 457 aa5.01□□□□□ -1.61
LSM5-205ENST00000409952 MAGEE1Q9HCI5 957 aa5.01□□□□□ -1.61
LSM5-205ENST00000409952 OLAHQ9NV23 265 aa5.01□□□□□ -1.61
LSM5-205ENST00000409952 MCM9Q9NXL9 1143 aa5.01□□□□□ -1.61
LSM5-205ENST00000409952 ARL15Q9NXU5 204 aa5.01□□□□□ -1.61
LSM5-205ENST00000409952 HAO2Q9NYQ3 351 aa5.01□□□□□ -1.61
LSM5-205ENST00000409952 CNIH4Q9P003 139 aa5.01□□□□□ -1.61
LSM5-205ENST00000409952 NLKQ9UBE8 527 aa5.01□□□□□ -1.61
LSM5-205ENST00000409952 CTNNAL1Q9UBT7 734 aa5.01□□□□□ -1.61
LSM5-205ENST00000409952 FBXO40Q9UH90 709 aa5.01□□□□□ -1.61
LSM5-205ENST00000409952 APPL1Q9UKG1 709 aa5.01□□□□□ -1.61
LSM5-205ENST00000409952 WBP11Q9Y2W2 641 aaKnown RBP5.01□□□□□ -1.61
LSM5-205ENST00000409952 FAM96BQ9Y3D0 163 aa5.01□□□□□ -1.61
LSM5-205ENST00000409952 TRIM17Q9Y577 477 aa5.01□□□□□ -1.61
LSM5-205ENST00000409952 PCDHGA5Q9Y5G8 931 aa5.01□□□□□ -1.61
LSM5-205ENST00000409952 PCDHGA1Q9Y5H4 931 aa5.01□□□□□ -1.61
LSM5-205ENST00000409952 TRGV11A0A075B6L2 103 aa5□□□□□ -1.61
LSM5-205ENST00000409952 SYNJ2BP-COX16A0A087WUM0 186 aa5□□□□□ -1.61
LSM5-205ENST00000409952 OOEPA6NGQ2 149 aa5□□□□□ -1.61
LSM5-205ENST00000409952 AP4M1O00189 453 aa5□□□□□ -1.61
LSM5-205ENST00000409952 SLC33A1O00400 549 aaPredicted RBP5□□□□□ -1.61
LSM5-205ENST00000409952 SEC14L5O43304 696 aa5□□□□□ -1.61
LSM5-205ENST00000409952 PLRG1O43660 514 aaKnown RBP5□□□□□ -1.61
LSM5-205ENST00000409952 HLA-DQA2P01906 255 aa5□□□□□ -1.61
LSM5-205ENST00000409952 INHBAP08476 426 aa5□□□□□ -1.61
LSM5-205ENST00000409952 CYP2A6P11509 494 aaPredicted RBP5□□□□□ -1.61
LSM5-205ENST00000409952 PDGFRAP16234 1089 aa5□□□□□ -1.61
LSM5-205ENST00000409952 ZNF182P17025 639 aaPredicted RBP5□□□□□ -1.61
LSM5-205ENST00000409952 EDN2P20800 178 aa5□□□□□ -1.61
LSM5-205ENST00000409952 SFPQP23246 707 aaKnown RBP eCLIP5□□□□□ -1.61
LSM5-205ENST00000409952 HSPA4P34932 840 aa5□□□□□ -1.61
LSM5-205ENST00000409952 TDO2P48775 406 aa5□□□□□ -1.61
LSM5-205ENST00000409952 DIO1P49895 249 aa5□□□□□ -1.61
LSM5-205ENST00000409952 CLCN3P51790 818 aa5□□□□□ -1.61
LSM5-205ENST00000409952 TKTL1P51854 596 aa5□□□□□ -1.61
LSM5-205ENST00000409952 LUMP51884 338 aaPredicted RBP5□□□□□ -1.61
LSM5-205ENST00000409952 VAV2P52735 878 aa5□□□□□ -1.61
LSM5-205ENST00000409952 ZNF132P52740 706 aa5□□□□□ -1.61
LSM5-205ENST00000409952 ASIC1P78348 528 aa5□□□□□ -1.61
LSM5-205ENST00000409952 HTD2P86397 168 aa5□□□□□ -1.61
LSM5-205ENST00000409952 ITIH3Q06033 890 aa5□□□□□ -1.61
LSM5-205ENST00000409952 GAB1Q13480 694 aa5□□□□□ -1.61
LSM5-205ENST00000409952 DRAP1Q14919 205 aaPredicted RBP5□□□□□ -1.61
LSM5-205ENST00000409952 CNGA3Q16281 694 aa5□□□□□ -1.61
LSM5-205ENST00000409952 SNAPC1Q16533 368 aa5□□□□□ -1.61
LSM5-205ENST00000409952 ANKDD1AQ495B1 522 aa5□□□□□ -1.61
LSM5-205ENST00000409952 CBWD6Q4V339 395 aa5□□□□□ -1.61
LSM5-205ENST00000409952 CBWD3Q5JTY5 395 aa5□□□□□ -1.61
LSM5-205ENST00000409952 DPY19L2P1Q6NXN4 242 aa5□□□□□ -1.61
LSM5-205ENST00000409952 TMEM270Q6UE05 265 aa5□□□□□ -1.61
LSM5-205ENST00000409952 MDGA2Q7Z553 956 aa5□□□□□ -1.61
LSM5-205ENST00000409952 CENPVQ7Z7K6 275 aaPredicted RBP5□□□□□ -1.61
LSM5-205ENST00000409952 SGMS1Q86VZ5 419 aa5□□□□□ -1.61
LSM5-205ENST00000409952 TDRPQ86YL5 185 aa5□□□□□ -1.61
LSM5-205ENST00000409952 DHX40Q8IX18 779 aaKnown RBP5□□□□□ -1.61
LSM5-205ENST00000409952 SAMD14Q8IZD0 417 aaPredicted RBP5□□□□□ -1.61
LSM5-205ENST00000409952 C12orf76Q8N812 135 aaPredicted RBP5□□□□□ -1.61
LSM5-205ENST00000409952 SPATA18Q8TC71 538 aa5□□□□□ -1.61
LSM5-205ENST00000409952 FKBP10Q96AY3 582 aa5□□□□□ -1.61
LSM5-205ENST00000409952 NACC2Q96BF6 587 aa5□□□□□ -1.61
LSM5-205ENST00000409952 TRIM44Q96DX7 344 aaPredicted RBP5□□□□□ -1.61
LSM5-205ENST00000409952 RNF31Q96EP0 1072 aa5□□□□□ -1.61
LSM5-205ENST00000409952 EDC3Q96F86 508 aaKnown RBP5□□□□□ -1.61
LSM5-205ENST00000409952 BOD1Q96IK1 185 aa5□□□□□ -1.61
LSM5-205ENST00000409952 CEP295NLQ96MC4 621 aa5□□□□□ -1.61
LSM5-205ENST00000409952 ZNF830Q96NB3 372 aaPredicted RBP5□□□□□ -1.61
LSM5-205ENST00000409952 CDRT15Q96T59 188 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms