RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 ILF2Q12905 390 aaKnown RBP20.75■□□□□ 0.91
USP39-203ENST00000409470 FAM45BPQ6NSW5 357 aa20.75■□□□□ 0.91
USP39-203ENST00000409470 NCEH1Q6PIU2 408 aa20.75■□□□□ 0.91
USP39-203ENST00000409470 HTR3DQ70Z44 454 aa20.75■□□□□ 0.91
USP39-203ENST00000409470 LONP2Q86WA8 852 aa20.75■□□□□ 0.91
USP39-203ENST00000409470 BBS7Q8IWZ6 715 aa20.75■□□□□ 0.91
USP39-203ENST00000409470 DCAF4L2Q8NA75 395 aa20.75■□□□□ 0.91
USP39-203ENST00000409470 MDGA1Q8NFP4 955 aa20.75■□□□□ 0.91
USP39-203ENST00000409470 OR4K2Q8NGD2 314 aa20.75■□□□□ 0.91
USP39-203ENST00000409470 FAM45AQ8TCE6 357 aa20.75■□□□□ 0.91
USP39-203ENST00000409470 AGR3Q8TD06 166 aa20.75■□□□□ 0.91
USP39-203ENST00000409470 UTP4Q969X6 686 aaKnown RBP20.75■□□□□ 0.91
USP39-203ENST00000409470 MOCOSQ96EN8 888 aa20.75■□□□□ 0.91
USP39-203ENST00000409470 DRC3Q9H069 523 aa20.75■□□□□ 0.91
USP39-203ENST00000409470 ILKAPQ9H0C8 392 aaPredicted RBP20.75■□□□□ 0.91
USP39-203ENST00000409470 ASAH2Q9NR71 780 aa20.75■□□□□ 0.91
USP39-203ENST00000409470 CXXC1Q9P0U4 656 aaPredicted RBP20.75■□□□□ 0.91
USP39-203ENST00000409470 CCL16O15467 120 aa20.75■□□□□ 0.91
USP39-203ENST00000409470 DIAPH2O60879 1101 aa20.75■□□□□ 0.91
USP39-203ENST00000409470 GLUD1P00367 558 aa20.75■□□□□ 0.91
USP39-203ENST00000409470 ALOX15P16050 662 aaPredicted RBP20.75■□□□□ 0.91
USP39-203ENST00000409470 TRAF2Q12933 501 aa20.75■□□□□ 0.91
USP39-203ENST00000409470 RCN2Q14257 317 aa20.75■□□□□ 0.91
USP39-203ENST00000409470 SEMA3AQ14563 771 aa20.75■□□□□ 0.91
USP39-203ENST00000409470 EFHBQ8N7U6 833 aa20.75■□□□□ 0.91
USP39-203ENST00000409470 BADQ92934 168 aa20.75■□□□□ 0.91
USP39-203ENST00000409470 SMIM14Q96QK8 99 aa20.75■□□□□ 0.91
USP39-203ENST00000409470 PLK2Q9NYY3 685 aa20.75■□□□□ 0.91
USP39-203ENST00000409470 ANKRD66B4E2M5 251 aa20.74■□□□□ 0.91
USP39-203ENST00000409470 ENO1P06733 434 aaKnown RBP20.74■□□□□ 0.91
USP39-203ENST00000409470 CHRNGP07510 517 aa20.74■□□□□ 0.91
USP39-203ENST00000409470 OGNP20774 298 aaKnown RBP20.74■□□□□ 0.91
USP39-203ENST00000409470 SLC8A1P32418 973 aa20.74■□□□□ 0.91
USP39-203ENST00000409470 ABL2P42684 1182 aa20.74■□□□□ 0.91
USP39-203ENST00000409470 ERVFC1P60507 584 aa20.74■□□□□ 0.91
USP39-203ENST00000409470 FPGSQ05932 587 aa20.74■□□□□ 0.91
USP39-203ENST00000409470 VWA5B1Q5TIE3 1220 aa20.74■□□□□ 0.91
USP39-203ENST00000409470 PLPP4Q5VZY2 271 aa20.74■□□□□ 0.91
USP39-203ENST00000409470 TPGS1Q6ZTW0 290 aa20.74■□□□□ 0.91
USP39-203ENST00000409470 SPNS2Q8IVW8 549 aa20.74■□□□□ 0.91
USP39-203ENST00000409470 SLC22A17Q8WUG5 538 aa20.74■□□□□ 0.91
USP39-203ENST00000409470 ALG14Q96F25 216 aa20.74■□□□□ 0.91
USP39-203ENST00000409470 C2orf49Q9BVC5 232 aaPredicted RBP20.74■□□□□ 0.91
USP39-203ENST00000409470 A8MUI8 341 aa20.73■□□□□ 0.91
USP39-203ENST00000409470 CAPN14A8MX76 684 aa20.73■□□□□ 0.91
USP39-203ENST00000409470 ZNF195O14628 629 aa20.73■□□□□ 0.91
USP39-203ENST00000409470 TUBB3Q13509 450 aa20.73■□□□□ 0.91
USP39-203ENST00000409470 RIPK1Q13546 671 aa20.73■□□□□ 0.91
USP39-203ENST00000409470 TBCCQ15814 346 aa20.73■□□□□ 0.91
USP39-203ENST00000409470 MPPE1Q53F39 396 aa20.73■□□□□ 0.91
USP39-203ENST00000409470 ATXN7L2Q5T6C5 722 aaPredicted RBP20.73■□□□□ 0.91
USP39-203ENST00000409470 AFTPHQ6ULP2 937 aa20.73■□□□□ 0.91
USP39-203ENST00000409470 TREML1Q86YW5 311 aa20.73■□□□□ 0.91
USP39-203ENST00000409470 APCDD1Q8J025 514 aa20.73■□□□□ 0.91
USP39-203ENST00000409470 CPXM2Q8N436 756 aa20.73■□□□□ 0.91
USP39-203ENST00000409470 CCNYL1Q8N7R7 359 aa20.73■□□□□ 0.91
USP39-203ENST00000409470 BTBD10Q9BSF8 475 aa20.73■□□□□ 0.91
USP39-203ENST00000409470 CORO1CQ9ULV4 474 aaPredicted RBP20.73■□□□□ 0.91
USP39-203ENST00000409470 RAP2CQ9Y3L5 183 aa20.73■□□□□ 0.91
USP39-203ENST00000409470 NRG2O14511 850 aaPredicted RBP20.73■□□□□ 0.91
USP39-203ENST00000409470 PIGNO95427 931 aa20.73■□□□□ 0.91
USP39-203ENST00000409470 MT-CO1P00395 513 aa20.73■□□□□ 0.91
USP39-203ENST00000409470 LPOP22079 712 aaPredicted RBP20.73■□□□□ 0.91
USP39-203ENST00000409470 ATP5F1P24539 256 aaPredicted RBP20.73■□□□□ 0.91
USP39-203ENST00000409470 MPSTP25325 297 aa20.73■□□□□ 0.91
USP39-203ENST00000409470 CTNNB1P35222 781 aa20.73■□□□□ 0.91
USP39-203ENST00000409470 STC1P52823 247 aa20.73■□□□□ 0.91
USP39-203ENST00000409470 UBAP2LQ14157 1087 aaKnown RBP20.73■□□□□ 0.91
USP39-203ENST00000409470 ARL13AQ5H913 290 aaPredicted RBP20.73■□□□□ 0.91
USP39-203ENST00000409470 TECRLQ5HYJ1 363 aa20.73■□□□□ 0.91
USP39-203ENST00000409470 PPM1LQ5SGD2 360 aa20.73■□□□□ 0.91
USP39-203ENST00000409470 RETSATQ6NUM9 610 aa20.73■□□□□ 0.91
USP39-203ENST00000409470 PIM3Q86V86 326 aa20.73■□□□□ 0.91
USP39-203ENST00000409470 CCDC106Q9BWC9 280 aa20.73■□□□□ 0.91
USP39-203ENST00000409470 SMG9Q9H0W8 520 aaKnown RBP20.73■□□□□ 0.91
USP39-203ENST00000409470 COG4Q9H9E3 785 aa20.73■□□□□ 0.91
USP39-203ENST00000409470 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.73■□□□□ 0.91
USP39-203ENST00000409470 SORCS3Q9UPU3 1222 aa20.73■□□□□ 0.91
USP39-203ENST00000409470 DENND4CQ5VZ89 1909 aa20.72■□□□□ 0.91
USP39-203ENST00000409470 HIDE1A8MVS5 230 aa20.72■□□□□ 0.91
USP39-203ENST00000409470 LEFTY2O00292 366 aa20.72■□□□□ 0.91
USP39-203ENST00000409470 GYG2O15488 501 aa20.72■□□□□ 0.91
USP39-203ENST00000409470 RBP1P09455 135 aa20.72■□□□□ 0.91
USP39-203ENST00000409470 PRSS56P0CW18 603 aa20.72■□□□□ 0.91
USP39-203ENST00000409470 HSPA8P11142 646 aaKnown RBP20.72■□□□□ 0.91
USP39-203ENST00000409470 HOXB8P17481 243 aaPredicted RBP20.72■□□□□ 0.91
USP39-203ENST00000409470 CCR10P46092 362 aa20.72■□□□□ 0.91
USP39-203ENST00000409470 EPHB1P54762 984 aa20.72■□□□□ 0.91
USP39-203ENST00000409470 ANKRD49Q8WVL7 239 aa20.72■□□□□ 0.91
USP39-203ENST00000409470 UBXN10Q96LJ8 280 aa20.72■□□□□ 0.91
USP39-203ENST00000409470 SLC46A2Q9BY10 475 aa20.72■□□□□ 0.91
USP39-203ENST00000409470 TM6SF2Q9BZW4 377 aa20.72■□□□□ 0.91
USP39-203ENST00000409470 POMKQ9H5K3 350 aa20.72■□□□□ 0.91
USP39-203ENST00000409470 DNMT3BQ9UBC3 853 aaKnown RBP20.72■□□□□ 0.91
USP39-203ENST00000409470 ANKRD36A6QL64 1941 aa20.72■□□□□ 0.91
USP39-203ENST00000409470 K7ERQ8 282 aa20.71■□□□□ 0.91
USP39-203ENST00000409470 FDXRP22570 491 aa20.71■□□□□ 0.91
USP39-203ENST00000409470 PRKAA1Q13131 559 aa20.71■□□□□ 0.91
USP39-203ENST00000409470 ACAP2Q15057 778 aa20.71■□□□□ 0.91
USP39-203ENST00000409470 GPR158Q5T848 1215 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms