RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 MPOP05164 745 aa10.67□□□□□ -0.7
NIF3L1-204ENST00000409357 FYNP06241 537 aa10.67□□□□□ -0.7
NIF3L1-204ENST00000409357 GPIP06744 558 aa10.67□□□□□ -0.7
NIF3L1-204ENST00000409357 TRAPPC2P0DI81 140 aa10.67□□□□□ -0.7
NIF3L1-204ENST00000409357 TRAPPC2BP0DI82 140 aa10.67□□□□□ -0.7
NIF3L1-204ENST00000409357 NELFEP18615 380 aaKnown RBP10.67□□□□□ -0.7
NIF3L1-204ENST00000409357 GARTP22102 1010 aa10.67□□□□□ -0.7
NIF3L1-204ENST00000409357 IL10P22301 178 aa10.67□□□□□ -0.7
NIF3L1-204ENST00000409357 FASP25445 335 aa10.67□□□□□ -0.7
NIF3L1-204ENST00000409357 GARSP41250 739 aaKnown RBP10.67□□□□□ -0.7
NIF3L1-204ENST00000409357 CASP3P42574 277 aa10.67□□□□□ -0.7
NIF3L1-204ENST00000409357 RPL14P50914 215 aaKnown RBP10.67□□□□□ -0.7
NIF3L1-204ENST00000409357 RAD23AP54725 363 aa10.67□□□□□ -0.7
NIF3L1-204ENST00000409357 PRAMEP78395 509 aa10.67□□□□□ -0.7
NIF3L1-204ENST00000409357 CYP24A1Q07973 514 aa10.67□□□□□ -0.7
NIF3L1-204ENST00000409357 RIPPLY1Q0D2K3 151 aa10.67□□□□□ -0.7
NIF3L1-204ENST00000409357 BNIP2Q12982 314 aa10.67□□□□□ -0.7
NIF3L1-204ENST00000409357 INPP5AQ14642 412 aa10.67□□□□□ -0.7
NIF3L1-204ENST00000409357 CDK10Q15131 360 aa10.67□□□□□ -0.7
NIF3L1-204ENST00000409357 CYBRD1Q53TN4 286 aa10.67□□□□□ -0.7
NIF3L1-204ENST00000409357 BRDTQ58F21 947 aaPredicted RBP10.67□□□□□ -0.7
NIF3L1-204ENST00000409357 WDR44Q5JSH3 913 aa10.67□□□□□ -0.7
NIF3L1-204ENST00000409357 CELF3Q5SZQ8 465 aaKnown RBP10.67□□□□□ -0.7
NIF3L1-204ENST00000409357 ZFYVE27Q5T4F4 411 aa10.67□□□□□ -0.7
NIF3L1-204ENST00000409357 DNAJC24Q6P3W2 148 aa10.67□□□□□ -0.7
NIF3L1-204ENST00000409357 SLC16A12Q6ZSM3 486 aa10.67□□□□□ -0.7
NIF3L1-204ENST00000409357 SCML4Q8N228 414 aa10.67□□□□□ -0.7
NIF3L1-204ENST00000409357 CBR4Q8N4T8 237 aa10.67□□□□□ -0.7
NIF3L1-204ENST00000409357 ZNF781Q8N8C0 355 aa10.67□□□□□ -0.7
NIF3L1-204ENST00000409357 PPTC7Q8NI37 304 aa10.67□□□□□ -0.7
NIF3L1-204ENST00000409357 SLC2A14Q8TDB8 520 aa10.67□□□□□ -0.7
NIF3L1-204ENST00000409357 DEPDC1BQ8WUY9 529 aa10.67□□□□□ -0.7
NIF3L1-204ENST00000409357 HDAC2Q92769 488 aaKnown RBP10.67□□□□□ -0.7
NIF3L1-204ENST00000409357 SCLYQ96I15 445 aa10.67□□□□□ -0.7
NIF3L1-204ENST00000409357 SPATA33Q96N06 139 aa10.67□□□□□ -0.7
NIF3L1-204ENST00000409357 AIFM2Q9BRQ8 373 aa10.67□□□□□ -0.7
NIF3L1-204ENST00000409357 EMILIN2Q9BXX0 1053 aa10.67□□□□□ -0.7
NIF3L1-204ENST00000409357 SEMA6AQ9H2E6 1030 aa10.67□□□□□ -0.7
NIF3L1-204ENST00000409357 RUBCNLQ9H714 662 aa10.67□□□□□ -0.7
NIF3L1-204ENST00000409357 TM9SF3Q9HD45 589 aa10.67□□□□□ -0.7
NIF3L1-204ENST00000409357 SMPD3Q9NY59 655 aaPredicted RBP10.67□□□□□ -0.7
NIF3L1-204ENST00000409357 STMN3Q9NZ72 180 aa10.67□□□□□ -0.7
NIF3L1-204ENST00000409357 AGO2Q9UKV8 859 aaKnown RBP10.67□□□□□ -0.7
NIF3L1-204ENST00000409357 ST14Q9Y5Y6 855 aa10.67□□□□□ -0.7
NIF3L1-204ENST00000409357 ZNF487B1APH4 448 aa10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 F8VP50 259 aa10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 HAT1O14929 419 aa10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 CFLARO15519 480 aa10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 GNAO1P09471 354 aa10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 UMPSP11172 480 aa10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 HOXD8P13378 290 aaPredicted RBP10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 TCF4P15884 667 aa10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 CTRB1P17538 263 aa10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 CKMT2P17540 419 aa10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 ITGB5P18084 799 aa10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 RRM2P31350 389 aa10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 ZNF132P52740 706 aa10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 RPL7AP62424 266 aaKnown RBP10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 NPTX1Q15818 432 aa10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 PERM1Q5SV97 790 aa10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 GRTP1Q5TC63 336 aa10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 CYP4A22Q5TCH4 519 aa10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 NDUFAF5Q5TEU4 345 aa10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 CTRB2Q6GPI1 263 aa10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 LCN8Q6JVE9 175 aa10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 GDF6Q6KF10 455 aaPredicted RBP10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 PRMT9Q6P2P2 845 aa10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 CRTC3Q6UUV7 619 aa10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 SLC22A16Q86VW1 577 aa10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 CDR2LQ86X02 465 aaPredicted RBP10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 DHFR2Q86XF0 187 aa10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 EPHX4Q8IUS5 362 aa10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 MAP4K3Q8IVH8 894 aa10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 ANKRD52Q8NB46 1076 aa10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 CYP2W1Q8TAV3 490 aa10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 GIPC2Q8TF65 315 aa10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 GIMAP1Q8WWP7 306 aa10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 MUL1Q969V5 352 aa10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 ROPN1LQ96C74 230 aa10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 CDK5RAP1Q96SZ6 601 aaKnown RBP10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 C20orf96Q9NUD7 363 aaPredicted RBP10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 ARHGAP28Q9P2N2 729 aa10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 UBA2Q9UBT2 640 aaPredicted RBP10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 CDYLQ9Y232 598 aa10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 SLC27A5Q9Y2P5 690 aa10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 TRPC5OSA6NMA1 111 aa10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 SPATA31C2B4DYI2 1134 aa10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 G3V2L1 256 aa10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 CDK2AP1O14519 115 aa10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 POLR1CO15160 346 aaPredicted RBP10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 GRID2O43424 1007 aa10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 UPK1BO75841 260 aa10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 CSPG5O95196 566 aa10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 SNX4O95219 450 aa10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 F2P00734 622 aa10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 KRT8P05787 483 aa10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 CDH1P12830 882 aa10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 NAGAP17050 411 aa10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 GNA15P30679 374 aa10.66□□□□□ -0.7
NIF3L1-204ENST00000409357 PRIM2P49643 509 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms